FFCP PHASE1:Hg19::chr12:69252760..69252784,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:69252760..69252784,- | |||
|description=CAGE_peak_at_chr12:69252760..69252784,- | |description=CAGE_peak_at_chr12:69252760..69252784,- | ||
|id=chr12:69252760..69252784,- | |id=chr12:69252760..69252784,- | ||
|ontology_enrichment_celltype=CL:0002274!2.47e-09!5;CL:0000457!2.47e-09!5;CL:0002191!2.47e-09!5;CL:0000097!2.47e-09!5;CL:0000831!2.47e-09!5;CL:0002028!2.47e-09!5;CL:0000839!1.44e-08!70;CL:0000557!2.34e-08!71;CL:0000766!2.20e-07!76;CL:0002619!7.47e-07!3 | |ontology_enrichment_celltype=CL:0002274!2.47e-09!5;CL:0000457!2.47e-09!5;CL:0002191!2.47e-09!5;CL:0000097!2.47e-09!5;CL:0000831!2.47e-09!5;CL:0002028!2.47e-09!5;CL:0000839!1.44e-08!70;CL:0000557!2.34e-08!71;CL:0000766!2.20e-07!76;CL:0002619!7.47e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002619;7.82e-24;3!CL:0000097;2.92e-14;5!CL:0000163;3.84e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,6.75e-24,3;CL:0000097,2.80e-14,5;CL:0002028,2.80e-14,5;CL:0000163,3.75e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.13e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-22!115;UBERON:0001049!1.21e-10!57;UBERON:0005068!1.21e-10!57;UBERON:0006241!1.21e-10!57;UBERON:0007135!1.21e-10!57;UBERON:0002616!4.55e-08!59;UBERON:0003080!9.58e-08!42;UBERON:0002405!1.60e-07!115;UBERON:0002371!2.22e-07!80;UBERON:0000062!3.23e-07!511;UBERON:0002298!3.98e-07!8;UBERON:0002780!6.83e-07!41;UBERON:0001890!6.83e-07!41;UBERON:0006240!6.83e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.18e-09;1!UBERON:0006518;3.18e-09;1!UBERON:0008949;3.18e-09;1!UBERON:0000101;3.18e-09;1!UBERON:0002167;3.18e-09;1!UBERON:0000029;1.13e-08;1!UBERON:0000941;1.13e-08;1!UBERON:0001301;1.13e-08;1!UBERON:0001785;1.13e-08;1!UBERON:0002464;1.13e-08;1!UBERON:0004904;1.13e-08;1!UBERON:0001021;1.13e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.06e-09,1;UBERON:0006518,3.06e-09,1;UBERON:0008949,3.06e-09,1;UBERON:0000101,3.06e-09,1;UBERON:0002167,3.06e-09,1;UBERON:0000029,7.75e-09,1;UBERON:0000941,8.36e-09,1;UBERON:0001785,8.36e-09,1;UBERON:0002464,8.36e-09,1;UBERON:0004904,8.36e-09,1;UBERON:0001021,8.36e-09,1;UBERON:0003902,8.36e-09,1;UBERON:0005425,8.36e-09,1;UBERON:0001301,1.05e-08,1 | |||
|phase1_expression=1.09007027562334,0.856402095563933,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35873211359887,2.26725566213286,3.60605794687861,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0.985326475791887,0.176096868026452,3.31724984865235,2.01767934783746,1.2624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,1.77148277162768,0,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0.258565912723101,0.13223260174269,0,0,1.70859860108311,1.10043013569766,5.79934677486074,1.48849806543585,0,0.121792598380896,0,0,0.5013797880454,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.975726071789027,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,1.21700790611806,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0,1.03382309777839,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,0,0.829169439458779,0.310298987585686,0,0,0.0645889098360061,0,0,0.25458863311266,0,0.435433495793923,0,0,0.286888821570705,0,0,0.426909383510862,0,0,0,0,0,0,0.603821380773079,0 | |phase1_expression=1.09007027562334,0.856402095563933,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35873211359887,2.26725566213286,3.60605794687861,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0.213557388818567,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,1.18157981336281,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0.594524649154913,0,0,0,0,0,0,0.985326475791887,0.176096868026452,3.31724984865235,2.01767934783746,1.2624243342638,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.164254312027618,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27429445378818,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0.511572370226872,0.295930216910801,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,1.77148277162768,0,0,0.221158519862449,0,0,0,0,0.153900517007594,0,0,0,0,0,0.366390373607449,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,1.22308667769421,0,0,0.0730893170861856,0,0.193978032976839,0,0,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551639951094387,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0,0,0,1.02586563574658,0,0.258565912723101,0.13223260174269,0,0,1.70859860108311,1.10043013569766,5.79934677486074,1.48849806543585,0,0.121792598380896,0,0,0.5013797880454,0,0.327872630709804,0,0,0.366078794705889,0.1251909307065,0.573409195690071,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.975726071789027,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,1.21700790611806,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.594092800654172,0,0,1.03382309777839,0.0644578879735772,0,0,0,0,0,0,0.716697915757256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,0,0.829169439458779,0.310298987585686,0,0,0.0645889098360061,0,0,0.25458863311266,0,0.435433495793923,0,0,0.286888821570705,0,0,0.426909383510862,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p@chr12:69252760..69252784,- | |short_description=p@chr12:69252760..69252784,- | ||
}} | }} |
Latest revision as of 11:47, 24 July 2015
Short description: | p@chr12:69252760..69252784, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69252760..69252784, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 6.75e-24 | 3 |
mast cell | 2.80e-14 | 5 |
basophil mast progenitor cell | 2.80e-14 | 5 |
endocrine cell | 3.75e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.06e-09 | 1 |
right lung lobe | 3.06e-09 | 1 |
lower lobe of lung | 3.06e-09 | 1 |
lobe of lung | 3.06e-09 | 1 |
right lung | 3.06e-09 | 1 |
lymph node | 7.75e-09 | 1 |
cranial nerve II | 8.36e-09 | 1 |
cranial nerve | 8.36e-09 | 1 |
nerve trunk | 8.36e-09 | 1 |
nerve connecting eye with brain | 8.36e-09 | 1 |
nerve | 8.36e-09 | 1 |
retinal neural layer | 8.36e-09 | 1 |
presumptive neural retina | 8.36e-09 | 1 |
epididymis | 1.05e-08 | 1 |