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FFCP PHASE1:Mm9::chr11:54336374..54336397,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=192786
|EntrezGene=192786
|HGNC=
|HGNC=
|MCL_coexpression_id=1291
|TSSclassifier=NA
|UniProt=Q5NCJ1,Q5NCJ2
|UniProt=Q5NCJ1,Q5NCJ2
|association_with_transcript=0bp_to_ENSMUST00000101206,ENSMUST00000108895,ENSMUST00000155132_5end
|association_with_transcript=0bp_to_ENSMUST00000101206,ENSMUST00000108895,ENSMUST00000155132_5end
|cluster_id=chr11:54336374..54336397,+
|description=CAGE_peak_1_at_Rapgef6_5end
|description=CAGE_peak_1_at_Rapgef6_5end
|id=chr11:54336374..54336397,+
|id=chr11:54336374..54336397,+
|ontology_enrichment_celltype=CL:0000838!2.46e-08!12;CL:0000084!1.04e-07!11;CL:0000827!1.04e-07!11;CL:0000542!1.51e-07!13;CL:0000051!1.51e-07!13;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9
|ontology_enrichment_celltype=CL:0000838!2.46e-08!12;CL:0000084!1.04e-07!11;CL:0000827!1.04e-07!11;CL:0000542!1.51e-07!13;CL:0000051!1.51e-07!13;CL:0000791!4.31e-07!9;CL:0000789!4.31e-07!9;CL:0002420!4.31e-07!9;CL:0002419!4.31e-07!9;CL:0000790!4.31e-07!9
|ontology_enrichment_celltype_v019_2=CL:0000838,2.46e-08,12;CL:0000084,1.04e-07,11;CL:0000827,1.04e-07,11;CL:0000542,1.51e-07,13;CL:0000051,1.51e-07,13;CL:0000791,4.31e-07,9;CL:0000789,4.31e-07,9;CL:0002420,4.31e-07,9;CL:0002419,4.31e-07,9;CL:0000790,4.31e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000926!1.35e-08!193;UBERON:0004120!1.35e-08!193;UBERON:0006603!1.35e-08!193;UBERON:0001048!4.14e-08!147;UBERON:0005911!6.03e-08!69;UBERON:0004921!5.76e-07!126;UBERON:0004185!5.76e-07!126;UBERON:0004177!7.83e-07!29;UBERON:0001004!9.57e-07!42
|ontology_enrichment_uberon=UBERON:0000926!1.35e-08!193;UBERON:0004120!1.35e-08!193;UBERON:0006603!1.35e-08!193;UBERON:0001048!4.14e-08!147;UBERON:0005911!6.03e-08!69;UBERON:0004921!5.76e-07!126;UBERON:0004185!5.76e-07!126;UBERON:0004177!7.83e-07!29;UBERON:0001004!9.57e-07!42
|ontology_enrichment_uberon_v019_2=UBERON:0001048,4.88e-09,134;UBERON:0004921,2.38e-08,114;UBERON:0001007,5.71e-08,116;UBERON:0001555,5.71e-08,116;UBERON:0007026,5.71e-08,116;UBERON:0005911,6.03e-08,69;UBERON:0004119,1.19e-07,118;UBERON:0000925,1.19e-07,118;UBERON:0006595,1.19e-07,118;UBERON:0001041,1.99e-07,80;UBERON:0004177,7.83e-07,29;UBERON:0005057,7.83e-07,29;UBERON:0001004,9.57e-07,42
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7.94535524854981,6.33251434863915,11.3286050963249,9.83576123131498,10.4702376793612,12.5726524093039,14.9121435140862,44.531742156051,11.3632574993424,6.6183396182839,8.16694991045,6.58715099736429,7.7719817725758,11.8530811032212,13.8016647934587,24.0127898734878,40.344548177943,40.612230882359,14.5365115488962,4.25722952109345,5.03283690107653,5.45667456506739,8.95133478337407,10.1327490938445,15.6254084375959,14.7689527174577,14.1353029927407,12.1930890648,13.3090564380629,19.8814076709095,20.2044867444692,23.1416266319507,8.16229381014761,7.5475224147182,8.43310252129072,7.89057696911169,7.92077335531981,8.44571139530319,11.9048555773722,9.64657705855796,6.52043735245972,6.21227026878773,4.14292712856459,2.86447756719698,4.98374228796694,1.37016503954128,6.7985450765073,3.37511250115903,5.40385443869065,6.79713613476307,4.14208249401456,5.39694207437719,7.98049746802062,8.19521307619844,9.72426868273176,6.91723436672342,5.88299227040045,8.00088220085815,9.68364769022803,8.98573786857083,10.6132828940795,8.61829619626815,12.0720858487089,8.89594320963883,9.34767225111091,10.9701745705221,10.9547548995107,9.85016770531272,9.25964258225784,11.1263193216893,10.3039244094078,6.17164654293748,9.05126611412621,9.29901140794552,12.6451382470126,12.234219453993,9.81529451543447,11.3415343181119,8.68130047744881,8.96307151382688,8.41713407486608,11.1516917036724,10.4414751318097,13.0953933814301,9.76102099471586,9.83823716003821,4.99621155875892,7.01794825336225,7.52048689169044,7.26895661861605,7.50010825006353,9.04284558919644
|phase1_expression=8.0074423552397,12.2141392673776,14.5599756604652,13.0059610861937,18.0322462780685,11.7515490338323,11.9142446703718,38.3496270621482,75.4627550732934,79.3478744231558,32.3601959946204,24.9686857655403,56.4962408772979,56.2113187554153,25.649451659806,29.9663395736942,22.3859801001007,43.849240984795,44.8364197890766,43.2877444833991,18.28430738248,14.0000241193248,15.6719873483361,7.51964387129011,7.34109699414944,11.4846392823004,15.0766698655676,11.2045040996662,9.88121781173144,15.6258680451157,5.76499327703792,17.14582818341,10.4561013889377,0,13.5760261283099,10.3065480122265,9.80012910059372,71.9874404867481,43.7547792933328,59.1581830690392,75.2936304679698,64.8893210710523,67.0004287182992,10.0717454380462,7.80602370390262,7.70896359079063,6.25913075478431,2.39827672018491,0.659058548203415,3.4997381833371,1.95980990275508,0,46.475781877993,49.3246256567714,44.7004752859477,5.40244815675489,5.73066879877513,4.64104883049698,2.63011399117477,2.11596391708813,5.07065122804943,2.71075625655306,1.77858959222228,0.899899717281399,0.988866362566974,0,2.39680088414724,3.45796474789399,5.80661828927475,3.37514845829227,5.25812403378455,1.42825492201902,3.53389665522582,4.65465037016825,2.97120960156533,3.67687514644008,4.40463523997555,4.46905683298157,5.68344173048101,3.42904348098504,2.28719109006024,3.12548022334056,1.67509799400829,3.93933827022176,6.57032465440283,3.53554302568401,4.55589378557129,4.28718725398191,6.20954785332109,8.01058537131927,26.3776684718527,9.46466264679525,6.11974200336975,9.71465744948071,6.49776417447669,11.6486990645307,8.28622078777336,4.26075806445144,2.07828803682295,1.06001872353102,10.7040999030277,10.2661181931454,12.7402619853323,7.11066703153331,8.01016851741492,6.33399663687746,9.60496445528088,9.7056297761201,52.3054524967287,10.984718290797,4.8575891494518,1.52232739156071,5.30415643688935,4.52167921657868,7.76085467095652,7.6656620711102,7.91023896749996,10.9895511259133,24.7690954545965,10.5148452465816,16.5631138845295,17.455509112868,11.1835056730873,9.36898550436951,10.6817820474862,11.7510245395952,22.4054282826071,7.7987355029143,13.0882333885257,6.29120685500255,5.49000723382352,4.27224797183739,4.86708096538374,4.85859368927628,2.49345653471472,5.67844420737152,9.3692214742291,14.9288364732112,12.1306924048164,8.41767423545896,7.1566243629487,5.9774547152703,9.18316862007281,7.9873553452929,13.4031903328116,13.1957131893395,12.2749259173245,7.24369438069244,7.11374376678379,11.7245769704048,10.7330185740009,8.11024209982027,6.39508673218875,13.2335823278423,9.67176041117334,10.1507476077432,8.42655824775882,11.0659600059328,14.7765019685708,7.24940203874257,7.50483391939508,8.82304101158973,12.3107262504309,12.5929108318338,13.2669717083145,12.0917651270212,10.9992094573844,16.5806786161381,14.4812667923863,10.1783827729039,12.1603214318784,16.0819986167866,11.8557062257167,10.3338942445486,8.20130799400096,5.35103984372279,16.8513579321737,10.3135720998782,7.89166526980366,9.28946687441754,8.76298736990235,7.05892336181699,9.56225588532942,6.84812254005213,6.16887780007865,7.08205505313247,12.0640900224129,9.54991065797524,8.18849165900304,10.7858329038507,8.42938394511308,12.9441827615339,2.46568271239006,9.82537208443668,11.270773567308,9.77526373657508,9.89157684554891,10.1696938840962,11.1296305338693,9.88987991463334,8.63493003127561,9.74837594982224,6.52195779591728,9.34332592010127,11.2038627214526,9.44420872016386,14.6059287399722,16.1588697034119,10.4396599230382,13.5217184601881,8.2688965655268,9.60964946158285,20.1275489138296,9.67566463938109,9.36113019343682,7.07220858251913,6.63770430031075,5.30687873499704,19.2143317773269,9.47457058852424,8.31121379854332,8.82674446030978,11.4998221661366,15.5780819420889,11.9021820443007,15.2204245329083,13.0837169608139,12.1805579306826,14.9887482538038,15.0754249538479,15.5416483679306,13.1630643309176,4.52373851817817,4.89515115436839,8.35999264132362,7.17435540392304,4.17431533968259,5.74337264301796,6.72133276044369,7.06918596172244,4.10160685241134,8.58965237452605,7.53981892064796,8.36390792833932,7.12955757063661,10.7569081699756,6.07216052512342,5.55286130031493,5.13874111330481,7.06906896127976,12.0649072427028,4.80777129901589,9.44744364250741,10.5580878702423,9.2921596837974,5.34117399540959,6.95344181018927,6.78978287121233,4.72483028609236,6.7635732547664,11.8877014857382,7.63420831902762,8.19943970284859,9.16506598013866,11.5960469432499,9.28219889233682,8.17055053809091,6.48219938512717,2.32845630808958,7.28745919107414,8.33499098118686,6.0645397984704,6.2528627828806,4.56697423671899,7.97883807416615,7.41412248023371,7.93902232997863,12.5313552235525,13.4015474157602,12.4847754601283,10.3853939282729,13.1312719796049,8.45294426226567,4.82105785227325,17.428829841381,10.1129565301979,13.1488114432495,19.7786879854926,24.3315725343425,24.7080427063044,21.5872606092196,20.5728634915777,21.5591959134901,7.63736494412091,7.59206384594725,11.5892096262304,10.2605073780711,7.94535524854981,6.33251434863915,11.3286050963249,9.83576123131498,10.4702376793612,12.5726524093039,14.9121435140862,44.531742156051,11.3632574993424,6.6183396182839,8.16694991045,6.58715099736429,7.7719817725758,11.8530811032212,13.8016647934587,24.0127898734878,40.344548177943,40.612230882359,14.5365115488962,4.25722952109345,5.03283690107653,5.45667456506739,8.95133478337407,10.1327490938445,15.6254084375959,14.7689527174577,14.1353029927407,12.1930890648,13.3090564380629,19.8814076709095,20.2044867444692,23.1416266319507,8.16229381014761,7.5475224147182,8.43310252129072,7.89057696911169,7.92077335531981,8.44571139530319,11.9048555773722,9.64657705855796,6.52043735245972,6.21227026878773,4.14292712856459,2.86447756719698,4.98374228796694,1.37016503954128,6.7985450765073,3.37511250115903,5.40385443869065,6.79713613476307,4.14208249401456,5.39694207437719,7.98049746802062,8.19521307619844,9.72426868273176,6.91723436672342,5.88299227040045,8.00088220085815,9.68364769022803,8.98573786857083,10.6132828940795,8.61829619626815,12.0720858487089,8.89594320963883,9.34767225111091,10.9701745705221,10.9547548995107,9.85016770531272,9.25964258225784,11.1263193216893,10.3039244094078,6.17164654293748,9.05126611412621,9.29901140794552,12.6451382470126,12.234219453993,9.81529451543447,11.3415343181119,8.68130047744881,8.96307151382688,8.41713407486608,11.1516917036724,10.4414751318097,13.0953933814301,9.76102099471586,9.83823716003821,4.99621155875892,7.01794825336225,7.52048689169044,7.26895661861605,7.50010825006353,9.04284558919644
|short_description=p1@Rapgef6
|short_description=p1@Rapgef6
}}
}}

Latest revision as of 17:02, 1 October 2015

Short description:p1@Rapgef6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rapgef6_5end
Coexpression cluster:MCL_coexpression_mm9:1291
Association with transcript: 0bp_to_ENSMUST00000101206, ENSMUST00000108895, ENSMUST00000155132_5end
EntrezGene:Rapgef6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rapgef6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.01
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I614.56
CD326+ enterocyte, pool1.CNhs13542.11848-124I313.01
CD326+ enterocyte, pool2.CNhs13197.11849-124I418.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.75
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.91
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E938.35
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E775.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F279.35
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E632.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.97
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E456.50
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E856.21
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A125.65
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A329.97
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A522.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A243.85
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A444.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A643.29
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H214.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I915.67
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.34
GP2+ M cell, pool1.CNhs13228.11845-124H911.48
GP2+ M cell, pool2.CNhs13231.11846-124I115.08
GP2+ M cell, pool3.CNhs13240.11847-124I211.20
Ileum epithelium, pool1.CNhs13199.10252-104B99.88
Ileum epithelium, pool2.CNhs13232.10253-104C115.63
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.76
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I317.15
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G610.46
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F513.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F610.31
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F79.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G871.99
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H143.75
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H359.16
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G975.29
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H264.89
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H467.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D810.07
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.81
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B37.71
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B76.26
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A246.48
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I949.32
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A144.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.40
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.73
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C75.07
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E83.46
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.81
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.38
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.65
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.97
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.43
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.29
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.68
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.57
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D96.21
Mouse Schwann, donor2.CNhs12573.11746-123F98.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C46.12
Mouse hepatocyte, donor3.CNhs12615.11637-122C89.71
Mouse hepatocyte, donor6.CNhs13090.11822-124F46.50
Mouse hepatocyte, donor8.CNhs13091.11824-124F611.65
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.29
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G18.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G39.60
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.71
accessory axillary lymph node, adult.CNhs10475.1063-29H952.31
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I15.30
adrenal gland, embryo E18.CNhs11026.1262-18F54.52
adrenal gland, neonate N00.CNhs11191.1311-23C17.76
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A87.91
aorta, adult.CNhs10498.46-23H110.99
bone (os femoris), adult.CNhs10483.56-12G224.77
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A616.56
bone (os femoris), neonate N20.CNhs11195.1350-25C317.46
cecum, adult.CNhs10467.37-13H411.18
cerebellum, adult.CNhs10494.15-8B29.37
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H711.75
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C722.41
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D413.09
corpora quadrigemina, adult.CNhs10501.16-22A46.29
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F14.27
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F22.49
diencephalon, neonate N30.CNhs11201.1388-42B25.68
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.37
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A214.93
epididymis, adult.CNhs10490.58-23B212.13
eyeball, adult.CNhs10484.31-12G48.42
eyeball, embryo E12.CNhs11016.345-16C67.16
eyeball, embryo E14.CNhs10521.399-16E25.98
eyeball, embryo E15.CNhs10593.426-16C99.18
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C613.40
eyeball, neonate N01.CNhs11140.1532-43E713.20
eyeball, neonate N02.CNhs11205.1551-44G812.27
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E27.11
forelimb, embryo E12.CNhs10600.359-14H211.72
forelimb, embryo E13.CNhs10589.384-1E210.73
forelimb, embryo E14.CNhs10577.413-26A88.11
forelimb, embryo E15.CNhs11007.437-20E76.40
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B59.67
gonad, embryo E13.CNhs11044.1564-45I610.15
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D211.07
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D514.78
heart, embryo E11.CNhs10586.331-24E97.25
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I98.82
heart, embryo E14.CNhs10597.403-26D412.31
heart, embryo E15.CNhs11017.431-16C812.59
heart, embryo E16.CNhs11021.457-17C613.27
heart, embryo E17.CNhs11025.479-18E512.09
heart, embryo E18.CNhs11030.1283-20G311.00
heart, neonate N00.CNhs11213.639-21E316.58
heart, neonate N03.CNhs11221.1349-25I214.48
heart, neonate N10.CNhs11118.749-24G110.18
heart, neonate N16.CNhs11209.782-15G112.16
heart, neonate N20.CNhs11127.821-26I616.08
heart, neonate N25.CNhs11196.1351-25D311.86
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E88.20
hippocampus, neonate N00.CNhs11228.627-43G15.35
intestinal mucosa, adult.CNhs10506.860-29I316.85
intestine, adult.CNhs10496.178-9A310.31
intestine, embryo E12.CNhs11019.1251-16I57.89
intestine, embryo E13.CNhs11010.381-16D59.29
intestine, embryo E15.CNhs10602.976-16D88.76
intestine, embryo E16.CNhs10585.463-22H47.06
intestine, embryo E17.CNhs10582.482-18D39.56
intestine, embryo E18.CNhs10526.1289-20F76.85
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E97.08
intestine, neonate N06.CNhs11102.688-20B812.06
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A58.19
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E38.43
intestine, neonate N30.CNhs11131.1384-42G112.94
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F89.83
kidney, embryo E16.CNhs10584.464-22A511.27
kidney, embryo E17.CNhs11028.483-18I29.78
kidney, embryo E18.CNhs11001.1288-20C79.89
kidney, neonate N00.CNhs11214.646-21G710.17
kidney, neonate N10.CNhs11206.758-6D511.13
kidney, neonate N20.CNhs11113.832-19I19.89
kidney, neonate N25.CNhs11122.1353-25F38.63
kidney, neonate N30.CNhs11203.1385-42H19.75
liver, adult pregnant day01.CNhs10466.508-5B26.52
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H611.20
liver, embryo E14.CNhs10594.409-16E19.44
liver, embryo E15.CNhs10520.433-16D714.61
liver, embryo E16.CNhs10523.462-17F516.16
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F48.27
liver, neonate N03.CNhs11123.1345-25G29.61
liver, neonate N06.CNhs11101.684-20A820.13
liver, neonate N07.CNhs11103.716-20H29.68
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A37.07
liver, neonate N25.CNhs11198.1368-26H16.64
liver, neonate N30.CNhs11106.1382-42D15.31
lung, adult.CNhs10474.28-22B119.21
lung, embryo E12.CNhs10522.354-16G29.47
lung, embryo E14.CNhs10604.404-26F88.31
lung, embryo E15.CNhs11020.432-17C58.83
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A615.58
lung, embryo E18.CNhs10583.1287-20I611.90
lung, neonate N00.CNhs11224.640-42C615.22
lung, neonate N06.CNhs11212.683-20E513.08
lung, neonate N07.CNhs11111.715-19A312.18
lung, neonate N10.CNhs11219.750-23E614.99
lung, neonate N20.CNhs11109.822-18A415.08
lung, neonate N25.CNhs11119.1359-25C715.54
lung, neonate N30.CNhs11133.1394-42H213.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H27.17
medulla oblongata, adult.CNhs10477.17-12C24.17
medulla oblongata, neonate N30.CNhs11200.1396-42A35.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C76.72
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.07
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.10
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.76
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.55
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I97.07
ovary, adult.CNhs10507.91-2I712.06
ovary, embryo E18.CNhs11040.505-44H74.81
ovary, neonate N00.CNhs11217.1299-22I49.45
oviduct, adult pregnant day01.CNhs10500.988-6G610.56
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F45.34
pancreas, embryo E15.CNhs11042.1556-45F26.95
pancreas, embryo E16.CNhs11003.460-26E56.79
pancreas, embryo E17.CNhs10599.1558-45G34.72
pancreas, embryo E18.CNhs10580.1535-43I76.76
pancreas, neonate N00.CNhs11105.645-26G911.89
pancreas, neonate N01.CNhs11138.1531-43D77.63
pancreas, neonate N02.CNhs11139.1539-43D88.20
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H59.28
pituitary gland, adult.CNhs10493.21-1G88.17
pituitary gland, embryo E12.CNhs11018.346-16E66.48
pituitary gland, embryo E13.CNhs11009.370-44C72.33
pituitary gland, embryo E14.CNhs11037.398-44A57.29
pituitary gland, embryo E15.CNhs10592.427-16B98.33
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F56.25
pituitary gland, neonate N00.CNhs11190.1308-22E94.57
placenta, adult pregnant day10.CNhs10472.539-13I77.98
placenta, adult pregnant day17.CNhs10464.577-18G37.41
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C312.53
skin, neonate N00.CNhs11124.650-25G413.40
skin, neonate N03.CNhs11215.662-22H312.48
skin, neonate N06.CNhs11097.693-20I510.39
skin, neonate N10.CNhs11108.762-6C413.13
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C94.82
spleen, adult.CNhs10465.25-2G217.43
spleen, embryo E16.CNhs11035.461-43C110.11
spleen, embryo E18.CNhs11011.1271-21F213.15
spleen, neonate N10.CNhs11116.752-24D119.78
spleen, neonate N20.CNhs11112.824-19H124.33
spleen, neonate N25.CNhs11099.1354-25G324.71
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C621.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C920.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D321.56
stomach, adult.CNhs10503.33-1H67.64
stomach, embryo E12.CNhs10588.356-43E37.59
stomach, embryo E15.CNhs10603.1252-16G811.59
stomach, embryo E16.CNhs11022.459-17D410.26
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C66.33
stomach, neonate N03.CNhs11193.1340-24B811.33
stomach, neonate N07.CNhs11210.718-18A99.84
stomach, neonate N25.CNhs11104.1355-25E410.47
stomach, neonate N30.CNhs11134.1386-42I112.57
submandibular gland, adult.CNhs10469.59-29C114.91
testis, adult.CNhs10504.57-7G544.53
testis, embryo E13.CNhs11031.389-23F511.36
testis, embryo E15.CNhs11034.443-27C56.62
testis, embryo E16.CNhs11033.470-26G58.17
testis, embryo E17.CNhs11029.486-18I56.59
testis, embryo E18.CNhs11027.503-18G57.77
testis, neonate N00.CNhs11189.1300-22B711.85
testis, neonate N07.CNhs11222.726-26I413.80
testis, neonate N10.CNhs11204.763-44D924.01
testis, neonate N20.CNhs11110.839-18H340.34
testis, neonate N30.CNhs11130.1391-42E240.61
thymus, adult.CNhs10471.38-12B514.54
thymus, embryo E14.CNhs11041.402-44I44.26
thymus, embryo E15.CNhs11005.430-45I25.03
thymus, embryo E16.CNhs11002.456-26C55.46
thymus, embryo E17.CNhs10581.478-18C18.95
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F815.63
thymus, neonate N03.CNhs11137.2104-43C714.77
thymus, neonate N06.CNhs11197.681-26C414.14
thymus, neonate N07.CNhs11211.713-19D312.19
thymus, neonate N10.CNhs11194.748-24E413.31
thymus, neonate N20.CNhs11186.820-7A219.88
thymus, neonate N25.CNhs11125.1362-25G720.20
thymus, neonate N30.CNhs11132.1393-42G223.14
tongue, adult.CNhs10499.32-1B48.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H37.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F78.43
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.89
urinary bladder, adult.CNhs10481.879-12E47.92
uterus, adult pregnant day19.CNhs10497.590-15F58.45
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D59.65
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D74.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.80
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I85.40
whole body, embryo E12.CNhs10587.857-27C97.98
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D29.72
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.99
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.62
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.35
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.85
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.13
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.05
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.65
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.23
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.82
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G511.34
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G58.96
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.15
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.44
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G59.76
whole body, embryo E17.5.CNhs10513.490-9F99.84
whole body, embryo E17.CNhs10517.475-3I55.00
whole body, embryo E18.CNhs10516.493-3B37.02
whole body, neonate N00.CNhs10525.657-19C27.52
whole body, neonate N01.CNhs10576.659-23C67.27
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B49.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphoid lineage restricted progenitor cell2.46e-0812
T cell1.04e-0711
pro-T cell1.04e-0711
lymphocyte1.51e-0713
common lymphoid progenitor1.51e-0713
mature alpha-beta T cell4.31e-079
alpha-beta T cell4.31e-079
immature T cell4.31e-079
mature T cell4.31e-079
immature alpha-beta T cell4.31e-079

Uber anatomy
Ontology termp-valuen
primordium4.88e-09134
subdivision of digestive tract2.38e-08114
digestive system5.71e-08116
digestive tract5.71e-08116
primitive gut5.71e-08116
endo-epithelium6.03e-0869
endoderm-derived structure1.19e-07118
endoderm1.19e-07118
presumptive endoderm1.19e-07118
foregut1.99e-0780
hemopoietic organ7.83e-0729
immune organ7.83e-0729
respiratory system9.57e-0742
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