FFCP PHASE1:Mm9::chr12:87423505..87423553,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=76411 | |EntrezGene=76411 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DA69 | |UniProt=Q9DA69 | ||
|association_with_transcript=0bp_to_ENSMUST00000054565,NM_001199843,NM_029601,uc007oho.2,uc007ohp.2_5end | |association_with_transcript=0bp_to_ENSMUST00000054565,NM_001199843,NM_029601,uc007oho.2,uc007ohp.2_5end | ||
|cluster_id=chr12:87423505..87423553,+ | |||
|description=CAGE_peak_1_at_1700019E19Rik_5end | |description=CAGE_peak_1_at_1700019E19Rik_5end | ||
|id=chr12:87423505..87423553,+ | |id=chr12:87423505..87423553,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!1.38e-09!23;UBERON:0001009!1.38e-09!23;UBERON:0007100!3.94e-09!18;UBERON:0000948!3.94e-09!18;UBERON:0005498!3.94e-09!18;UBERON:0004140!3.94e-09!18;UBERON:0009881!3.94e-09!18;UBERON:0004141!3.94e-09!18;UBERON:0003084!3.94e-09!18;UBERON:0007005!3.94e-09!18;UBERON:0004139!3.94e-09!18;UBERON:0004291!3.94e-09!18;UBERON:0005178!1.57e-08!17;UBERON:0005181!1.57e-08!17;UBERON:0002224!1.57e-08!17;UBERON:0000915!1.57e-08!17;UBERON:0008947!1.57e-08!17;UBERON:0003258!1.57e-08!17;UBERON:0005156!5.44e-08!26;UBERON:0000990!5.44e-08!26;UBERON:0003133!3.29e-07!24;UBERON:0005153!4.63e-07!17;UBERON:0002048!4.65e-07!14;UBERON:0000117!4.65e-07!14;UBERON:0000171!4.65e-07!14;UBERON:0000170!4.65e-07!14;UBERON:0005597!4.65e-07!14;UBERON:0000118!4.65e-07!14 | |ontology_enrichment_uberon=UBERON:0004535!1.38e-09!23;UBERON:0001009!1.38e-09!23;UBERON:0007100!3.94e-09!18;UBERON:0000948!3.94e-09!18;UBERON:0005498!3.94e-09!18;UBERON:0004140!3.94e-09!18;UBERON:0009881!3.94e-09!18;UBERON:0004141!3.94e-09!18;UBERON:0003084!3.94e-09!18;UBERON:0007005!3.94e-09!18;UBERON:0004139!3.94e-09!18;UBERON:0004291!3.94e-09!18;UBERON:0005178!1.57e-08!17;UBERON:0005181!1.57e-08!17;UBERON:0002224!1.57e-08!17;UBERON:0000915!1.57e-08!17;UBERON:0008947!1.57e-08!17;UBERON:0003258!1.57e-08!17;UBERON:0005156!5.44e-08!26;UBERON:0000990!5.44e-08!26;UBERON:0003133!3.29e-07!24;UBERON:0005153!4.63e-07!17;UBERON:0002048!4.65e-07!14;UBERON:0000117!4.65e-07!14;UBERON:0000171!4.65e-07!14;UBERON:0000170!4.65e-07!14;UBERON:0005597!4.65e-07!14;UBERON:0000118!4.65e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.38e-09,23;UBERON:0001009,1.38e-09,23;UBERON:0007100,3.92e-09,18;UBERON:0000948,3.92e-09,18;UBERON:0005498,3.92e-09,18;UBERON:0004140,3.92e-09,18;UBERON:0009881,3.92e-09,18;UBERON:0004141,3.92e-09,18;UBERON:0003084,3.92e-09,18;UBERON:0007005,3.92e-09,18;UBERON:0004139,3.92e-09,18;UBERON:0004291,3.92e-09,18;UBERON:0005178,1.56e-08,17;UBERON:0005181,1.56e-08,17;UBERON:0002224,1.56e-08,17;UBERON:0000915,1.56e-08,17;UBERON:0008947,1.56e-08,17;UBERON:0003258,1.56e-08,17;UBERON:0005156,5.42e-08,26;UBERON:0000990,5.42e-08,26;UBERON:0003133,3.28e-07,24;UBERON:0005153,4.61e-07,17;UBERON:0002048,4.63e-07,14;UBERON:0000117,4.63e-07,14;UBERON:0000171,4.63e-07,14;UBERON:0000170,4.63e-07,14;UBERON:0005597,4.63e-07,14;UBERON:0000118,4.63e-07,14 | |||
|phase1_expression=39.0763186935697,28.2670080187882,33.2149444754361,24.1971369045464,23.5420993074783,30.0503896722283,30.1360306368228,1.29123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,1.66554880907831,0.809901069559304,1.39912375625629,0.473193248037357,0.548457734422955,0,89.2954546586233,1.19149141441062,1.04479915655574,30.5585527535407,37.1643035328815,35.0281498110162,30.1533397311352,32.5361561355692,43.8954098944224,35.5362482961502,41.6853360031973,2.54012269383853,1.23012957516914,0,25.7077941578634,26.4313086120003,27.9712018079446,0,0,0,0,0,0,34.9993153972105,32.8461257151227,27.8991063285756,46.1610893165343,93.5327920872116,111.820267011846,123.46298591217,66.2135774287965,113.564525848328,0.335565212115473,0,0,40.9042503297156,53.5817532685475,48.988848766357,22.8617600771345,25.3915670050576,30.4239073682966,44.3886337010563,41.7968554172235,22.0475430733943,24.7216590641744,20.6039233334369,35.3528130411718,70.3119498738445,31.4179525294687,35.2365499045713,35.5449184683836,18.852964970651,18.1112203580323,28.1728838194394,37.5714246391487,35.8495326777908,13.2139057199266,17.7485399938411,18.8936035905179,22.8163277773235,25.8910031394819,16.1483144872596,27.080750903134,25.8870800614573,23.9893249009592,17.9723437138937,15.5185132071022,20.3175395949578,46.1929779332423,39.6750690560624,57.6830332516339,24.9522924324602,1.3599426674155,4.85732872474035,4.54843492213368,8.51251085484938,19.3813299781818,65.1043832248181,101.316541795119,90.4549310746471,53.2388126755852,56.4636500622998,71.3454671178608,35.5533351576666,56.5041617039269,54.9790908080964,52.0690178365227,25.5771890570694,10.0985774622397,19.8912466346865,30.5334175108399,29.2286859179656,30.9024766323118,25.7735715344985,24.1056849628195,23.625319169979,75.6416601267184,31.5226598085407,6.19227386364912,31.22100203985,14.3546986999256,21.3345111379498,24.2309289583559,28.3997373101201,24.5052646971742,22.9911349687732,0.11981512450592,1.79970819298022,0.508280908292259,25.7639899776295,19.6725259212009,14.7015591972051,19.9897968221118,20.9686675010871,28.2591740601002,22.3892943033506,36.7640103499642,18.9098595327341,31.3376220457757,21.8859530121933,31.2289063110489,45.7505187822611,40.3339170763982,37.3747948232573,37.2840015349277,35.4875005189034,35.1381467098983,41.9099460597205,30.6106549964636,26.8530633838303,29.5597888595434,31.1257940047156,33.9217644055229,34.8252166522167,37.6581309626537,27.2676945541336,2.1066395619397,0.51469581422943,0.568326998791185,48.2603050007719,48.5468944160869,58.5201699748298,49.9531392084794,61.1936760734426,65.4092558642484,61.8540293036085,59.2884217093158,56.8647217328115,49.3679549740441,35.9526746333219,37.0484459624561,38.7429966677131,40.1776710982623,39.5908935343097,21.2392848049769,17.6995933292369,19.8251269790279,21.4204958997471,29.0072020727918,31.1197140292988,25.2580224191303,30.4542122181247,29.131523743678,28.914295169109,21.353807769503,26.6812306652898,27.3955377592294,31.2361661104607,30.804325764821,27.8634016682809,27.4495323340862,24.2952353370328,31.6745394591646,28.5621281524322,18.0332377076929,30.1403965211065,30.062635510982,27.1425622975533,30.7961935795133,24.2080642686548,26.0617888216682,24.8028299482819,5.33614728756868,9.34332592010127,7.27268281918851,3.14806957338795,6.08580364165509,5.06472035480075,8.14802725700543,10.9324532231308,6.32327384422638,7.13859674289012,10.0637744569148,16.0020607497456,12.1694692514679,13.639259409144,12.3784215330119,9.16642690590398,62.2618250861458,35.4348940010807,31.1263105004269,35.4767229270143,38.2545104710258,47.9067896283593,63.5576521165657,56.5887578787617,56.118111301804,49.165161102028,55.4902594928055,57.516023465224,49.0425348499143,66.3939178889138,13.5712155545345,14.1415477792864,19.1788066477424,39.4589547215767,30.9862638676438,26.2554177966535,39.1804519450254,20.4501451035542,30.9198055027932,21.8645696806118,22.6194567619439,26.7645053706858,28.7410289566288,23.7784285862619,25.0982635038434,25.1340037803728,27.6701444562566,24.7417413644791,42.1562053068558,34.0105303004458,35.8351310577867,39.2628892674634,9.2921596837974,27.4342118855129,21.4649725444973,15.8428266994954,15.3556984298002,23.6725063916824,25.0675444373175,19.2672876623078,21.3898427030833,13.5895805912401,13.7044191147498,11.3449097573006,22.1285743739962,39.0732574047943,43.9819524861365,41.3670477610973,40.9655939713652,32.1063871683727,25.6696472139309,18.8768268451052,40.3635337869582,59.7366439835973,56.4552699020702,25.3924829529879,31.0011699256139,27.3820679173828,24.9488198966555,21.1741760671129,26.5247561333164,30.0388989257026,2.9048049735635,19.8131393244694,16.6675074632741,6.02779062415011,3.55404992074665,3.20289442489132,0.849892149969277,1.11961161858926,0.967399816630967,28.6401185404534,27.0467274511871,27.8547669963783,21.4930628235385,21.3270061934758,25.766782522049,23.1966675781892,20.415403564158,34.0282724579238,30.8483636434467,22.9895545842163,551.855386971822,29.4547595706638,33.2571565818766,35.7790186553048,37.1980291615866,36.8324353569896,38.3758170371615,40.1029505319366,44.8797994142042,154.372253207818,264.699575750978,2.8441000856536,17.4343685149541,16.2283312320427,7.9251702016455,5.37080087002444,6.15912199821921,3.846254384639,3.54454865218985,3.93769154797776,2.28620419965,2.92395936896837,2.24153125701431,2.21287235772758,1.5193997283604,21.0859256762147,32.4099491926134,28.6187202584227,25.5184616873399,43.4676586572429,60.0583921443782,42.124873581471,34.5133090317296,38.1194799066876,24.8490810751509,19.3336599333014,23.4887160510153,14.7793736815571,17.8121455140367,28.7049681008086,18.9006300064906,21.6154177547626,18.5788387683524,22.7814537170801,29.7869687566587,29.5278406316763,28.000311343678,26.7417388775123,25.7824190032418,30.5180224027023,34.0037493536471,29.6690482424008,33.054678587957,30.5763626234195,31.4314331863897,29.9915882803861,29.7779993754226,25.8021364191623,26.3628802506265,34.2931457723813,32.099958286725,30.093838392338,32.9668720642645,29.5869829470139,29.8296249575311,29.993411240928,35.0501199222562,26.0170085771868,31.5266424391358,29.2766543305201,28.170907822407,34.1990624869196,29.0620803630144,35.9131053860953,27.0487841323117,25.7096699000221,29.4646351082176,24.9448314309405,32.794123866794,27.4791635731741,28.071793013449,23.4209448912645,23.3371765123989,21.838550492832,22.02744438394 | |phase1_expression=39.0763186935697,28.2670080187882,33.2149444754361,24.1971369045464,23.5420993074783,30.0503896722283,30.1360306368228,1.29123323441576,0,0,0,0.0797721589953364,0,0.0874204024189974,1.66554880907831,0.809901069559304,1.39912375625629,0.473193248037357,0.548457734422955,0,89.2954546586233,1.19149141441062,1.04479915655574,30.5585527535407,37.1643035328815,35.0281498110162,30.1533397311352,32.5361561355692,43.8954098944224,35.5362482961502,41.6853360031973,2.54012269383853,1.23012957516914,0,25.7077941578634,26.4313086120003,27.9712018079446,0,0,0,0,0,0,34.9993153972105,32.8461257151227,27.8991063285756,46.1610893165343,93.5327920872116,111.820267011846,123.46298591217,66.2135774287965,113.564525848328,0.335565212115473,0,0,40.9042503297156,53.5817532685475,48.988848766357,22.8617600771345,25.3915670050576,30.4239073682966,44.3886337010563,41.7968554172235,22.0475430733943,24.7216590641744,20.6039233334369,35.3528130411718,70.3119498738445,31.4179525294687,35.2365499045713,35.5449184683836,18.852964970651,18.1112203580323,28.1728838194394,37.5714246391487,35.8495326777908,13.2139057199266,17.7485399938411,18.8936035905179,22.8163277773235,25.8910031394819,16.1483144872596,27.080750903134,25.8870800614573,23.9893249009592,17.9723437138937,15.5185132071022,20.3175395949578,46.1929779332423,39.6750690560624,57.6830332516339,24.9522924324602,1.3599426674155,4.85732872474035,4.54843492213368,8.51251085484938,19.3813299781818,65.1043832248181,101.316541795119,90.4549310746471,53.2388126755852,56.4636500622998,71.3454671178608,35.5533351576666,56.5041617039269,54.9790908080964,52.0690178365227,25.5771890570694,10.0985774622397,19.8912466346865,30.5334175108399,29.2286859179656,30.9024766323118,25.7735715344985,24.1056849628195,23.625319169979,75.6416601267184,31.5226598085407,6.19227386364912,31.22100203985,14.3546986999256,21.3345111379498,24.2309289583559,28.3997373101201,24.5052646971742,22.9911349687732,0.11981512450592,1.79970819298022,0.508280908292259,25.7639899776295,19.6725259212009,14.7015591972051,19.9897968221118,20.9686675010871,28.2591740601002,22.3892943033506,36.7640103499642,18.9098595327341,31.3376220457757,21.8859530121933,31.2289063110489,45.7505187822611,40.3339170763982,37.3747948232573,37.2840015349277,35.4875005189034,35.1381467098983,41.9099460597205,30.6106549964636,26.8530633838303,29.5597888595434,31.1257940047156,33.9217644055229,34.8252166522167,37.6581309626537,27.2676945541336,2.1066395619397,0.51469581422943,0.568326998791185,48.2603050007719,48.5468944160869,58.5201699748298,49.9531392084794,61.1936760734426,65.4092558642484,61.8540293036085,59.2884217093158,56.8647217328115,49.3679549740441,35.9526746333219,37.0484459624561,38.7429966677131,40.1776710982623,39.5908935343097,21.2392848049769,17.6995933292369,19.8251269790279,21.4204958997471,29.0072020727918,31.1197140292988,25.2580224191303,30.4542122181247,29.131523743678,28.914295169109,21.353807769503,26.6812306652898,27.3955377592294,31.2361661104607,30.804325764821,27.8634016682809,27.4495323340862,24.2952353370328,31.6745394591646,28.5621281524322,18.0332377076929,30.1403965211065,30.062635510982,27.1425622975533,30.7961935795133,24.2080642686548,26.0617888216682,24.8028299482819,5.33614728756868,9.34332592010127,7.27268281918851,3.14806957338795,6.08580364165509,5.06472035480075,8.14802725700543,10.9324532231308,6.32327384422638,7.13859674289012,10.0637744569148,16.0020607497456,12.1694692514679,13.639259409144,12.3784215330119,9.16642690590398,62.2618250861458,35.4348940010807,31.1263105004269,35.4767229270143,38.2545104710258,47.9067896283593,63.5576521165657,56.5887578787617,56.118111301804,49.165161102028,55.4902594928055,57.516023465224,49.0425348499143,66.3939178889138,13.5712155545345,14.1415477792864,19.1788066477424,39.4589547215767,30.9862638676438,26.2554177966535,39.1804519450254,20.4501451035542,30.9198055027932,21.8645696806118,22.6194567619439,26.7645053706858,28.7410289566288,23.7784285862619,25.0982635038434,25.1340037803728,27.6701444562566,24.7417413644791,42.1562053068558,34.0105303004458,35.8351310577867,39.2628892674634,9.2921596837974,27.4342118855129,21.4649725444973,15.8428266994954,15.3556984298002,23.6725063916824,25.0675444373175,19.2672876623078,21.3898427030833,13.5895805912401,13.7044191147498,11.3449097573006,22.1285743739962,39.0732574047943,43.9819524861365,41.3670477610973,40.9655939713652,32.1063871683727,25.6696472139309,18.8768268451052,40.3635337869582,59.7366439835973,56.4552699020702,25.3924829529879,31.0011699256139,27.3820679173828,24.9488198966555,21.1741760671129,26.5247561333164,30.0388989257026,2.9048049735635,19.8131393244694,16.6675074632741,6.02779062415011,3.55404992074665,3.20289442489132,0.849892149969277,1.11961161858926,0.967399816630967,28.6401185404534,27.0467274511871,27.8547669963783,21.4930628235385,21.3270061934758,25.766782522049,23.1966675781892,20.415403564158,34.0282724579238,30.8483636434467,22.9895545842163,551.855386971822,29.4547595706638,33.2571565818766,35.7790186553048,37.1980291615866,36.8324353569896,38.3758170371615,40.1029505319366,44.8797994142042,154.372253207818,264.699575750978,2.8441000856536,17.4343685149541,16.2283312320427,7.9251702016455,5.37080087002444,6.15912199821921,3.846254384639,3.54454865218985,3.93769154797776,2.28620419965,2.92395936896837,2.24153125701431,2.21287235772758,1.5193997283604,21.0859256762147,32.4099491926134,28.6187202584227,25.5184616873399,43.4676586572429,60.0583921443782,42.124873581471,34.5133090317296,38.1194799066876,24.8490810751509,19.3336599333014,23.4887160510153,14.7793736815571,17.8121455140367,28.7049681008086,18.9006300064906,21.6154177547626,18.5788387683524,22.7814537170801,29.7869687566587,29.5278406316763,28.000311343678,26.7417388775123,25.7824190032418,30.5180224027023,34.0037493536471,29.6690482424008,33.054678587957,30.5763626234195,31.4314331863897,29.9915882803861,29.7779993754226,25.8021364191623,26.3628802506265,34.2931457723813,32.099958286725,30.093838392338,32.9668720642645,29.5869829470139,29.8296249575311,29.993411240928,35.0501199222562,26.0170085771868,31.5266424391358,29.2766543305201,28.170907822407,34.1990624869196,29.0620803630144,35.9131053860953,27.0487841323117,25.7096699000221,29.4646351082176,24.9448314309405,32.794123866794,27.4791635731741,28.071793013449,23.4209448912645,23.3371765123989,21.838550492832,22.02744438394 | ||
|short_description=p1@1700019E19Rik | |short_description=p1@1700019E19Rik | ||
}} | }} |
Latest revision as of 23:05, 26 September 2015
Short description: | p1@1700019E19Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1700019E19Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000054565, NM_001199843, NM_029601, uc007oho.2, uc007ohp.2_5end |
EntrezGene: | 1700019E19Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.38e-09 | 23 |
circulatory system | 1.38e-09 | 23 |
primary circulatory organ | 3.92e-09 | 18 |
heart | 3.92e-09 | 18 |
primitive heart tube | 3.92e-09 | 18 |
primary heart field | 3.92e-09 | 18 |
anterior lateral plate mesoderm | 3.92e-09 | 18 |
heart tube | 3.92e-09 | 18 |
heart primordium | 3.92e-09 | 18 |
cardiac mesoderm | 3.92e-09 | 18 |
cardiogenic plate | 3.92e-09 | 18 |
heart rudiment | 3.92e-09 | 18 |
thoracic cavity element | 1.56e-08 | 17 |
thoracic segment organ | 1.56e-08 | 17 |
thoracic cavity | 1.56e-08 | 17 |
thoracic segment of trunk | 1.56e-08 | 17 |
respiratory primordium | 1.56e-08 | 17 |
endoderm of foregut | 1.56e-08 | 17 |
reproductive structure | 5.42e-08 | 26 |
reproductive system | 5.42e-08 | 26 |
reproductive organ | 3.28e-07 | 24 |
epithelial bud | 4.61e-07 | 17 |
lung | 4.63e-07 | 14 |
respiratory tube | 4.63e-07 | 14 |
respiration organ | 4.63e-07 | 14 |
pair of lungs | 4.63e-07 | 14 |
lung primordium | 4.63e-07 | 14 |
lung bud | 4.63e-07 | 14 |