FFCP PHASE1:Mm9::chr13:21925605..21925620,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319180,319183,319185,319187,665596,665622 | |EntrezGene=319180,319183,319185,319187,665596,665622 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=649 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CBB6 | |UniProt=Q8CBB6 | ||
|association_with_transcript=0bp_to_ENSMUST00000091744,NM_001097979,NM_001110555,uc007prv.2,uc007prw.2_5end | |association_with_transcript=0bp_to_ENSMUST00000091744,NM_001097979,NM_001110555,uc007prv.2,uc007prw.2_5end | ||
|cluster_id=chr13:21925605..21925620,+ | |||
|description=CAGE_peak_1_at_Hist1h2bq_5end,CAGE_peak_1_at_Hist1h2br_5end,CAGE_peak_5_at_Hist1h2bf_5end,CAGE_peak_5_at_Hist1h2bj_5end,CAGE_peak_5_at_Hist1h2bl_5end,CAGE_peak_5_at_Hist1h2bn_5end | |description=CAGE_peak_1_at_Hist1h2bq_5end,CAGE_peak_1_at_Hist1h2br_5end,CAGE_peak_5_at_Hist1h2bf_5end,CAGE_peak_5_at_Hist1h2bj_5end,CAGE_peak_5_at_Hist1h2bl_5end,CAGE_peak_5_at_Hist1h2bn_5end | ||
|id=chr13:21925605..21925620,+ | |id=chr13:21925605..21925620,+ | ||
|ontology_enrichment_celltype=CL:0000063!9.22e-19!66;CL:0000988!2.79e-14!32;CL:0002032!2.79e-14!32;CL:0000037!2.79e-14!32;CL:0000566!2.79e-14!32;CL:0000837!2.79e-14!32;CL:0002031!1.52e-10!25;CL:0000049!2.80e-10!19;CL:0002320!2.62e-09!46;CL:0000134!2.62e-09!46;CL:0000144!3.52e-09!121;CL:0000012!3.52e-09!121;CL:0002076!1.26e-08!15;CL:0000763!2.06e-08!16;CL:0002371!5.04e-08!118;CL:0000219!1.19e-07!54;CL:0000066!3.49e-07!25;CL:0000548!7.25e-07!115;CL:0000004!7.25e-07!115;CL:0000255!7.25e-07!115;CL:0000839!8.68e-07!13 | |ontology_enrichment_celltype=CL:0000063!9.22e-19!66;CL:0000988!2.79e-14!32;CL:0002032!2.79e-14!32;CL:0000037!2.79e-14!32;CL:0000566!2.79e-14!32;CL:0000837!2.79e-14!32;CL:0002031!1.52e-10!25;CL:0000049!2.80e-10!19;CL:0002320!2.62e-09!46;CL:0000134!2.62e-09!46;CL:0000144!3.52e-09!121;CL:0000012!3.52e-09!121;CL:0002076!1.26e-08!15;CL:0000763!2.06e-08!16;CL:0002371!5.04e-08!118;CL:0000219!1.19e-07!54;CL:0000066!3.49e-07!25;CL:0000548!7.25e-07!115;CL:0000004!7.25e-07!115;CL:0000255!7.25e-07!115;CL:0000839!8.68e-07!13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.96e-18,32;CL:0002032,1.96e-18,32;CL:0000037,1.96e-18,32;CL:0000837,1.96e-18,32;CL:0000049,2.03e-14,19;CL:0002320,4.69e-14,46;CL:0000134,4.69e-14,46;CL:0002031,5.81e-13,25;CL:0000219,5.83e-13,54;CL:0002076,3.52e-12,15;CL:0000066,3.95e-12,25;CL:0000763,1.26e-11,16;CL:0000839,3.34e-09,13;CL:0000223,4.55e-09,20;CL:0000050,5.04e-09,9;CL:0000034,1.14e-08,97;CL:0002563,1.41e-07,9;CL:0002251,1.41e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0050686,5.52e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.52e-11!48;UBERON:0002390!2.67e-10!45;UBERON:0003061!2.67e-10!45;UBERON:0002384!2.62e-09!46;UBERON:0002405!3.54e-09!70;UBERON:0000072!1.51e-07!27;UBERON:0004177!2.42e-07!29;UBERON:0003929!3.13e-07!55;UBERON:0000490!6.21e-07!66;UBERON:0000344!6.27e-07!15 | |ontology_enrichment_uberon=UBERON:0002193!5.52e-11!48;UBERON:0002390!2.67e-10!45;UBERON:0003061!2.67e-10!45;UBERON:0002384!2.62e-09!46;UBERON:0002405!3.54e-09!70;UBERON:0000072!1.51e-07!27;UBERON:0004177!2.42e-07!29;UBERON:0003929!3.13e-07!55;UBERON:0000490!6.21e-07!66;UBERON:0000344!6.27e-07!15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.70e-14,48;UBERON:0002405,3.70e-14,48;UBERON:0002384,4.69e-14,46;UBERON:0002390,2.92e-13,45;UBERON:0003061,2.92e-13,45;UBERON:0000490,2.21e-11,66;UBERON:0003929,1.33e-10,55;UBERON:0000344,2.85e-10,15;UBERON:0004923,5.18e-09,24;UBERON:0000485,1.09e-08,11;UBERON:0001242,1.10e-08,13;UBERON:0001262,1.10e-08,13;UBERON:0004786,1.10e-08,13;UBERON:0000072,3.73e-08,27;UBERON:0004177,9.57e-08,29;UBERON:0005057,9.57e-08,29;UBERON:0003350,1.41e-07,9;UBERON:0004808,1.41e-07,9;UBERON:0001277,1.41e-07,9;UBERON:0001474,2.31e-07,22;UBERON:0004765,2.31e-07,22;UBERON:0001434,2.31e-07,22 | |||
|phase1_expression=10.5698239089164,15.3549179361319,7.73498706962211,16.3330674105688,30.5546395267272,62.451089151223,193.431266413095,12.3958390503913,1.68946466582,1.17032263160997,2.05461561870606,0.717949430958028,10.6144452557348,7.86783621770977,3.66420737997229,1334.91943790112,2676.52374571829,120.033353918809,90.3584117461819,196.492408782488,0,0.992909512008853,469.376021082667,119.834324672262,148.198395569392,30.4342940980961,41.3531516312712,42.663304071806,103.372740184267,44.1052727079879,70.9537634096975,1936.84355405188,14.1464901144451,998.434590397264,60.3699885280164,120.353883239548,68.1925649916313,199.221056230768,451.611829134757,239.250350996026,223.527965451785,268.436875588669,221.878231335237,0,0,0.183546752161682,0,0.218025156380447,0,0,0,1.43752564364972,126.00473714936,42.071004236658,17.1407837562657,0,0.286533439938757,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.933206510776299,0.810035629990144,0.210324961351382,0,0,0.489963196859816,0.383381884072945,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.569486723196412,0.186399445825301,7.64834552665159,37.4834938129656,9.27566363845369,7.74381489283248,0,0,0,0,0,0.511290967734173,99.4980397628987,158.296129380632,15.3519327556582,56.4636500622998,12.7402619853323,7.11066703153331,348.550576028055,303.018399108218,346.789769280141,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.691846491768175,0,0,0,0,0,6.19227386364912,0.485300549842228,0.662524555381181,2.42437626567611,0,0,0,0.255457055208591,171.335628043466,1458.96344177597,184.50596971009,0,0,0.125654352112864,0,0,0,0,0.81471491080253,0.622034853050465,0,0.210441855886474,1.43132487258974,1.37941262660084,0.540186389416048,0.452114453507145,0.612328492361951,0.512454881139399,0.749613796477831,0,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,414.305780514809,1313.24637000639,4.26245249093389,0.414251545071004,0.234526059981096,1.08037236876609,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.329119699826961,0.32833492815819,0,0,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,1.49301775374664,0.696710015581316,0.902072229254653,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.596869416123452,1.16978452271472,0,0.432276099749388,0.199141273254367,2.65535061334314,0.571242563048644,0,0,0.387904974335251,0.420814919341911,0.316182685621286,0,0.156998727841375,0,0,2.66952169145751,3.14494392181125,1.57403478669398,3.65148218499305,2.17059443777175,2.5462585178142,2.5892652370573,1.62135226775035,1.92192989231657,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.938760993154008,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0,0.327726629431476,0,0.144649058581512,24.1266054302836,18.4927932498361,0,0,0,0,0.655739781506702,0,0.315508219416257,0.390438744296638,0,0,0,0.566153061577665,0.404810701674894,0.876767573733936,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,0,1.21390318077491,0.302323556964751,1.69744571780308,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.913394847343798,0.704015124191131,0,0,0.16488625294148,0.484393280087717,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,0,2.73393409276564,1.03193433981611,0.370389054739423,3.01389531207506,1.77702496037333,3.20289442489132,145.50153607474,133.373734064446,146.630172206494,0,0.790839983952838,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.944050424693745,0.0826534557253359,0,0.259229946583586,0,0,0.299033092087958,0.496375471371293,0.194451188344048,1.03327858782185,0.337912250981556,0.938857909166032,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,1.62180172232131,0.821687657318618,1.16928740680016,1.79026695667481,1.58945083825012,2.16351809135944,2.21534290761866,2.3222283488074,1.600342939755,2.72230699869469,3.11865218367208,1.34696578296461,0.935015217452552,0.226730383615211,126.753979376591,135.916492763356,135.818654638539,0,0,0,0,0,0,0,0,6.53042092906013,0,0,0.675022500231806,0,0,0,1.66059756134683,0,0.341467211508268,0.972426868273176,1.04806581313991,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.516919220600519,0,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.592302255241736,0,0,0.543216455383447,0,0.355905054372522,0.394017929502254,0.409231043169689,1.08455788830176,0.771626443924566,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,1.3235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| |phase1_expression=10.5698239089164,15.3549179361319,7.73498706962211,16.3330674105688,30.5546395267272,62.451089151223,193.431266413095,12.3958390503913,1.68946466582,1.17032263160997,2.05461561870606,0.717949430958028,10.6144452557348,7.86783621770977,3.66420737997229,1334.91943790112,2676.52374571829,120.033353918809,90.3584117461819,196.492408782488,0,0.992909512008853,469.376021082667,119.834324672262,148.198395569392,30.4342940980961,41.3531516312712,42.663304071806,103.372740184267,44.1052727079879,70.9537634096975,1936.84355405188,14.1464901144451,998.434590397264,60.3699885280164,120.353883239548,68.1925649916313,199.221056230768,451.611829134757,239.250350996026,223.527965451785,268.436875588669,221.878231335237,0,0,0.183546752161682,0,0.218025156380447,0,0,0,1.43752564364972,126.00473714936,42.071004236658,17.1407837562657,0,0.286533439938757,0,0,0,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,1.15265491596466,0.933206510776299,0.810035629990144,0.210324961351382,0,0,0.489963196859816,0.383381884072945,0.919218786610021,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0.569486723196412,0.186399445825301,7.64834552665159,37.4834938129656,9.27566363845369,7.74381489283248,0,0,0,0,0,0.511290967734173,99.4980397628987,158.296129380632,15.3519327556582,56.4636500622998,12.7402619853323,7.11066703153331,348.550576028055,303.018399108218,346.789769280141,0.11418387971906,0.258937883647172,0,0.346970653532272,0.304465478312141,0.691846491768175,0,0,0,0,0,6.19227386364912,0.485300549842228,0.662524555381181,2.42437626567611,0,0,0,0.255457055208591,171.335628043466,1458.96344177597,184.50596971009,0,0,0.125654352112864,0,0,0,0,0.81471491080253,0.622034853050465,0,0.210441855886474,1.43132487258974,1.37941262660084,0.540186389416048,0.452114453507145,0.612328492361951,0.512454881139399,0.749613796477831,0,0.862271971731369,0.189106080167819,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0,0.199034266818493,414.305780514809,1313.24637000639,4.26245249093389,0.414251545071004,0.234526059981096,1.08037236876609,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0,0,0.329119699826961,0.32833492815819,0,0,0,0.134206418760372,0,0.205809224758569,0,0.264450566663544,1.49301775374664,0.696710015581316,0.902072229254653,0.403367049246685,0.22237804384487,0.570676878337677,0.474529061544512,0.164698954724011,0,0.596869416123452,1.16978452271472,0,0.432276099749388,0.199141273254367,2.65535061334314,0.571242563048644,0,0,0.387904974335251,0.420814919341911,0.316182685621286,0,0.156998727841375,0,0,2.66952169145751,3.14494392181125,1.57403478669398,3.65148218499305,2.17059443777175,2.5462585178142,2.5892652370573,1.62135226775035,1.92192989231657,0,0.744281895337007,0.312037673114561,0,0.358794827043824,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.938760993154008,0.335012514883631,0.476087281772027,0.585400943573396,0.315270288212382,0.44292937929755,0,0.327726629431476,0,0.144649058581512,24.1266054302836,18.4927932498361,0,0,0,0,0.655739781506702,0,0.315508219416257,0.390438744296638,0,0,0,0.566153061577665,0.404810701674894,0.876767573733936,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,0,1.21390318077491,0.302323556964751,1.69744571780308,0,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,0,0,0.720244376125241,0,0.643011105094777,0.354680467284547,0.178368817602071,0.329098041204242,0.913394847343798,0.704015124191131,0,0,0.16488625294148,0.484393280087717,0.603129249281559,0.477489376012546,0.656563598980245,0.291480836629851,0,2.73393409276564,1.03193433981611,0.370389054739423,3.01389531207506,1.77702496037333,3.20289442489132,145.50153607474,133.373734064446,146.630172206494,0,0.790839983952838,0.203319467126849,0.540026704109006,0.627264888043406,0.655087691238533,0.944050424693745,0.0826534557253359,0,0.259229946583586,0,0,0.299033092087958,0.496375471371293,0.194451188344048,1.03327858782185,0.337912250981556,0.938857909166032,0.2604087696879,0.419437377702843,0.241584120826006,0,0.316011120628178,1.62180172232131,0.821687657318618,1.16928740680016,1.79026695667481,1.58945083825012,2.16351809135944,2.21534290761866,2.3222283488074,1.600342939755,2.72230699869469,3.11865218367208,1.34696578296461,0.935015217452552,0.226730383615211,126.753979376591,135.916492763356,135.818654638539,0,0,0,0,0,0,0,0,6.53042092906013,0,0,0.675022500231806,0,0,0,1.66059756134683,0,0.341467211508268,0.972426868273176,1.04806581313991,0.367687016900028,0,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.187283014939765,0.320125762024346,0.516919220600519,0,0.115884325944855,0.192909220463705,0.824171801606613,0.441596760403192,0,0.177475806159338,0.238436189947321,0,0.188218760830661,0.592302255241736,0,0,0.543216455383447,0,0.355905054372522,0.394017929502254,0.409231043169689,1.08455788830176,0.771626443924566,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,1.32354851471709,0.927471342481686 | ||
|short_description=p1@Hist1h2bq,p1@Hist1h2br,p5@Hist1h2bf,p5@Hist1h2bj,p5@Hist1h2bl,p5@Hist1h2bn | |short_description=p1@Hist1h2bq,p1@Hist1h2br,p5@Hist1h2bf,p5@Hist1h2bj,p5@Hist1h2bl,p5@Hist1h2bn | ||
}} | }} |
Latest revision as of 06:45, 27 September 2015
Short description: | p1@Hist1h2bq, p1@Hist1h2br, p5@Hist1h2bf, p5@Hist1h2bj, p5@Hist1h2bl, p5@Hist1h2bn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Hist1h2bq_5end, CAGE_peak_1_at_Hist1h2br_5end, CAGE_peak_5_at_Hist1h2bf_5end, CAGE_peak_5_at_Hist1h2bj_5end, CAGE_peak_5_at_Hist1h2bl_5end, CAGE_peak_5_at_Hist1h2bn_5end |
Coexpression cluster: | MCL_coexpression_mm9:649 |
Association with transcript: | 0bp_to_ENSMUST00000091744, NM_001097979, NM_001110555, uc007prv.2, uc007prw.2_5end |
EntrezGene: | 319180,319183,319185,319187,665596,665622 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.96e-18 | 32 |
hematopoietic oligopotent progenitor cell | 1.96e-18 | 32 |
hematopoietic stem cell | 1.96e-18 | 32 |
hematopoietic multipotent progenitor cell | 1.96e-18 | 32 |
common myeloid progenitor | 2.03e-14 | 19 |
connective tissue cell | 4.69e-14 | 46 |
mesenchymal cell | 4.69e-14 | 46 |
hematopoietic lineage restricted progenitor cell | 5.81e-13 | 25 |
motile cell | 5.83e-13 | 54 |
endo-epithelial cell | 3.52e-12 | 15 |
epithelial cell | 3.95e-12 | 25 |
myeloid cell | 1.26e-11 | 16 |
myeloid lineage restricted progenitor cell | 3.34e-09 | 13 |
endodermal cell | 4.55e-09 | 20 |
megakaryocyte-erythroid progenitor cell | 5.04e-09 | 9 |
stem cell | 1.14e-08 | 97 |
intestinal epithelial cell | 1.41e-07 | 9 |
epithelial cell of alimentary canal | 1.41e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.70e-14 | 48 |
immune system | 3.70e-14 | 48 |
connective tissue | 4.69e-14 | 46 |
hematopoietic system | 2.92e-13 | 45 |
blood island | 2.92e-13 | 45 |
unilaminar epithelium | 2.21e-11 | 66 |
gut epithelium | 1.33e-10 | 55 |
mucosa | 2.85e-10 | 15 |
organ component layer | 5.18e-09 | 24 |
simple columnar epithelium | 1.09e-08 | 11 |
intestinal mucosa | 1.10e-08 | 13 |
wall of intestine | 1.10e-08 | 13 |
gastrointestinal system mucosa | 1.10e-08 | 13 |
segment of respiratory tract | 3.73e-08 | 27 |
hemopoietic organ | 9.57e-08 | 29 |
immune organ | 9.57e-08 | 29 |
epithelium of mucosa | 1.41e-07 | 9 |
gastrointestinal system epithelium | 1.41e-07 | 9 |
intestinal epithelium | 1.41e-07 | 9 |
bone element | 2.31e-07 | 22 |
skeletal element | 2.31e-07 | 22 |
skeletal system | 2.31e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 5.52e-07 | 6 |