FFCP PHASE1:Mm9::chr6:42299825..42299836,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=22793 | |EntrezGene=22793 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q62523,Q7TQE2 | |UniProt=Q62523,Q7TQE2 | ||
|association_with_transcript=0bp_to_ENSMUST00000070635,NM_011777,uc009bqy.1,uc009bqz.1,uc009bra.1,uc009brb.1_5end | |association_with_transcript=0bp_to_ENSMUST00000070635,NM_011777,uc009bqy.1,uc009bqz.1,uc009bra.1,uc009brb.1_5end | ||
|cluster_id=chr6:42299825..42299836,+ | |||
|description=CAGE_peak_3_at_Zyx_5end | |description=CAGE_peak_3_at_Zyx_5end | ||
|id=chr6:42299825..42299836,+ | |id=chr6:42299825..42299836,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.79e-11!33;CL:0000047!1.79e-11!33;CL:0000031!1.79e-11!33;CL:0000404!1.79e-11!33;CL:0002319!2.30e-09!43;CL:0000221!2.65e-09!44;CL:0000133!2.65e-09!44;CL:0000393!9.93e-09!39;CL:0000211!9.93e-09!39;CL:0000055!8.89e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.50e-12,33;CL:0000047,5.50e-12,33;CL:0000031,5.50e-12,33;CL:0000404,5.50e-12,33;CL:0002319,2.31e-09,43;CL:0000221,2.63e-09,44;CL:0000133,2.63e-09,44;CL:0000393,1.19e-08,39;CL:0000211,1.19e-08,39;CL:0000107,6.26e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.36e-13!73;UBERON:0005743!1.36e-13!73;UBERON:0000073!3.24e-13!75;UBERON:0001016!3.24e-13!75;UBERON:0004121!3.95e-12!102;UBERON:0000924!3.95e-12!102;UBERON:0006601!3.95e-12!102;UBERON:0000153!9.18e-12!94;UBERON:0002346!1.44e-11!71;UBERON:0003075!1.44e-11!71;UBERON:0007284!1.44e-11!71;UBERON:0007811!9.33e-10!86;UBERON:0001049!1.48e-07!52;UBERON:0005068!1.48e-07!52;UBERON:0006241!1.48e-07!52;UBERON:0007135!1.48e-07!52;UBERON:0000033!1.67e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.50e-14,73;UBERON:0001016,2.87e-13,75;UBERON:0004121,2.00e-11,95;UBERON:0000924,2.00e-11,95;UBERON:0006601,2.00e-11,95;UBERON:0002346,4.31e-11,64;UBERON:0003075,4.31e-11,64;UBERON:0007284,4.31e-11,64;UBERON:0010314,5.05e-09,92;UBERON:0010371,7.03e-09,73;UBERON:0000073,7.83e-08,54;UBERON:0001049,1.17e-07,52;UBERON:0005068,1.17e-07,52;UBERON:0006241,1.17e-07,52;UBERON:0007135,1.17e-07,52;UBERON:0002410,6.26e-07,9 | |||
|phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0,0.500895729946347,0.671517087647559,0.233612640595526,0.903863264091034,1.97104211012333,0.468129052643987,0.68487187290202,0.797721589953364,1.02720437958723,0.437102012094987,0.999329285446988,0.809901069559304,0.699561878128147,2.05050407482854,3.29074640653773,2.54633791078818,1.7008658030214,0.695036658406197,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0.61506478758457,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,1.76469446409304,2.73218193983378,1.45653105909346,0.755380907853464,0.608261587317087,1.10128051297009,3.12956537739216,1.09012578190223,0.659058548203415,3.30530828426282,0.979904951377538,0,3.6912173332702,0.725362142011344,2.01656279485478,1.28629718017973,0.85960031981627,1.03134418455488,6.27181028664753,3.70293685490423,6.33831403506179,0.677689064138264,0.889294796111139,1.7997994345628,0.988866362566974,0,2.09720077362883,1.92109152660777,2.07379224616955,1.75507719831198,3.36519938162211,4.28476476605705,1.98781686856452,1.34739879136449,1.24599112323707,1.83843757322004,2.20231761998777,2.68143409978894,1.53606533256243,5.80299666012853,5.6722339033494,3.64639359389732,3.90856198601933,2.25105044012672,1.98637722109853,3.24091444021034,4.12877874317399,5.03278503728312,0.984440513331393,1.5870027622425,4.34796733052517,0,0.679971333707751,0,0,0,0.983110940922263,0.852151612890289,0.259786004602869,0.35333957451034,1.69012103732017,0,0,7.11066703153331,0.649473123033642,1.26679932737549,1.51657333504435,0.79928715803342,3.10725460376606,2.82040064223167,2.4287945747259,3.04465478312141,1.38369298353635,2.11011696773672,3.17489509266403,1.0053327306374,0,1.87979163995885,1.76922110389975,0.323533699894818,0.220841518460394,0.969750506270444,0,7.31951992528868,3.35114730901528,0.255457055208591,3.83408398418945,2.99951365496704,2.92261522268049,1.79748767285787,1.37250180845588,1.88481528169297,1.21677024134594,2.30143911597297,3.1168206683934,1.46017136760982,1.83310854930569,1.24406970610093,0.252722758433675,0,3.90361328888111,2.29902104433473,6.12211241338187,2.26057226753573,2.78949646520444,4.09963904911519,3.74806898238915,2.06962696591213,3.88022387279116,4.72765200419548,4.92663147659057,4.3839146485515,3.05851974148158,1.39300866608867,1.02891068203972,2.58744546864041,2.1066395619397,1.28673953557358,2.84163499395593,2.27838349789052,1.87620847984877,1.62055855314913,4.7348947117042,1.96764231747404,1.54267112887378,1.62773761325285,1.60964040839772,1.28441876603886,0.493679549740441,0.985004784474571,1.13496333364198,0.877199924551994,0.658650345873152,0.671032093801859,1.26173969138476,1.85228302282712,0.330418782983798,0.528901133327089,2.34617075588757,3.0190767341857,1.54640953586512,0.80673409849337,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,3.03468641524931,1.71372768914593,2.25415471346161,3.46207257337034,3.10323979468201,1.61312385747733,1.70738650235495,0.295220295959204,0.470996183524124,0,0.296452627087149,0.166845105716094,0.982794975566015,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0,0.252578877947112,0,0,2.40179147216586,2.65287976478679,1.79261474086228,1.86719594352707,1.40814148973101,1.50755631697634,2.85652369063216,1.17080188714679,1.41871629695572,1.7717175171902,1.75400245523236,0.491589944147214,1.38147985492716,1.15719246865209,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,3.21101179975584,2.69586879162067,2.78689407140348,0.504941854408746,5.99465616890888,5.85658116444958,5.81643173878557,5.73525115086125,3.34198011123591,9.05844898524264,6.07216052512342,5.84511715822624,5.92931666919785,7.71171159412337,2.12910127812403,1.78065603667255,2.44330439030364,1.97964147567043,0,2.18502572539483,1.51161778482376,0.754420319023592,1.77181135728464,1.84461088766356,0.775284879504663,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,1.70219802876894,4.86164953884538,4.65691261617916,4.50107773566344,3.19212420556092,2.85390108163313,2.13913726782757,4.87143918583359,0.704015124191131,0.21183207086382,0.441056796109924,1.48397627647332,1.29171541356724,0.663442174209714,0.596861720015682,1.14898629821543,0.291480836629851,2.22510362412612,0.854354403989263,1.857481811669,1.29636169158798,0.941842285023455,0.683471138605126,1.14389086603261,10.0287273696375,9.37674730568509,8.29199842826543,0,2.84702394223022,2.64315307264903,1.18805874903981,0.209088296014469,0.655087691238533,0.404593039154462,0.743881101528023,0.523511883968059,0.777689839750757,0.621339313086926,0,1.19613236835183,0.827292452285488,2.13896307178452,1.54991788173277,3.04121025883401,2.69921648885234,4.29674469985035,2.41176492179135,0.724752362478018,1.15212002503146,8.53230025696081,3.04087822935246,2.2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| |phase1_expression=2.40223270657191,1.04692622291808,0.454999239389536,0,0.500895729946347,0.671517087647559,0.233612640595526,0.903863264091034,1.97104211012333,0.468129052643987,0.68487187290202,0.797721589953364,1.02720437958723,0.437102012094987,0.999329285446988,0.809901069559304,0.699561878128147,2.05050407482854,3.29074640653773,2.54633791078818,1.7008658030214,0.695036658406197,0.261199789138935,0.319984845586813,0.45881856213434,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,0.61506478758457,0,0,0,0,2.09265815368454,0.7813353445238,1.57057123192139,1.76469446409304,2.73218193983378,1.45653105909346,0.755380907853464,0.608261587317087,1.10128051297009,3.12956537739216,1.09012578190223,0.659058548203415,3.30530828426282,0.979904951377538,0,3.6912173332702,0.725362142011344,2.01656279485478,1.28629718017973,0.85960031981627,1.03134418455488,6.27181028664753,3.70293685490423,6.33831403506179,0.677689064138264,0.889294796111139,1.7997994345628,0.988866362566974,0,2.09720077362883,1.92109152660777,2.07379224616955,1.75507719831198,3.36519938162211,4.28476476605705,1.98781686856452,1.34739879136449,1.24599112323707,1.83843757322004,2.20231761998777,2.68143409978894,1.53606533256243,5.80299666012853,5.6722339033494,3.64639359389732,3.90856198601933,2.25105044012672,1.98637722109853,3.24091444021034,4.12877874317399,5.03278503728312,0.984440513331393,1.5870027622425,4.34796733052517,0,0.679971333707751,0,0,0,0.983110940922263,0.852151612890289,0.259786004602869,0.35333957451034,1.69012103732017,0,0,7.11066703153331,0.649473123033642,1.26679932737549,1.51657333504435,0.79928715803342,3.10725460376606,2.82040064223167,2.4287945747259,3.04465478312141,1.38369298353635,2.11011696773672,3.17489509266403,1.0053327306374,0,1.87979163995885,1.76922110389975,0.323533699894818,0.220841518460394,0.969750506270444,0,7.31951992528868,3.35114730901528,0.255457055208591,3.83408398418945,2.99951365496704,2.92261522268049,1.79748767285787,1.37250180845588,1.88481528169297,1.21677024134594,2.30143911597297,3.1168206683934,1.46017136760982,1.83310854930569,1.24406970610093,0.252722758433675,0,3.90361328888111,2.29902104433473,6.12211241338187,2.26057226753573,2.78949646520444,4.09963904911519,3.74806898238915,2.06962696591213,3.88022387279116,4.72765200419548,4.92663147659057,4.3839146485515,3.05851974148158,1.39300866608867,1.02891068203972,2.58744546864041,2.1066395619397,1.28673953557358,2.84163499395593,2.27838349789052,1.87620847984877,1.62055855314913,4.7348947117042,1.96764231747404,1.54267112887378,1.62773761325285,1.60964040839772,1.28441876603886,0.493679549740441,0.985004784474571,1.13496333364198,0.877199924551994,0.658650345873152,0.671032093801859,1.26173969138476,1.85228302282712,0.330418782983798,0.528901133327089,2.34617075588757,3.0190767341857,1.54640953586512,0.80673409849337,0.444756087689741,0.190225626112559,0,0,0.251335208800269,0,0.58489226135736,0,0,0.199141273254367,3.03468641524931,1.71372768914593,2.25415471346161,3.46207257337034,3.10323979468201,1.61312385747733,1.70738650235495,0.295220295959204,0.470996183524124,0,0.296452627087149,0.166845105716094,0.982794975566015,0.224862112384854,0.608580364165509,0.241177159752417,0.50925170356284,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,0,0.252578877947112,0,0,2.40179147216586,2.65287976478679,1.79261474086228,1.86719594352707,1.40814148973101,1.50755631697634,2.85652369063216,1.17080188714679,1.41871629695572,1.7717175171902,1.75400245523236,0.491589944147214,1.38147985492716,1.15719246865209,3.01582567878545,1.63171705145613,0.491764273019036,0.275936746304732,3.21101179975584,2.69586879162067,2.78689407140348,0.504941854408746,5.99465616890888,5.85658116444958,5.81643173878557,5.73525115086125,3.34198011123591,9.05844898524264,6.07216052512342,5.84511715822624,5.92931666919785,7.71171159412337,2.12910127812403,1.78065603667255,2.44330439030364,1.97964147567043,0,2.18502572539483,1.51161778482376,0.754420319023592,1.77181135728464,1.84461088766356,0.775284879504663,0.727067458955011,1.06949213515416,0.632073515871632,0,1.03135543248187,1.70219802876894,4.86164953884538,4.65691261617916,4.50107773566344,3.19212420556092,2.85390108163313,2.13913726782757,4.87143918583359,0.704015124191131,0.21183207086382,0.441056796109924,1.48397627647332,1.29171541356724,0.663442174209714,0.596861720015682,1.14898629821543,0.291480836629851,2.22510362412612,0.854354403989263,1.857481811669,1.29636169158798,0.941842285023455,0.683471138605126,1.14389086603261,10.0287273696375,9.37674730568509,8.29199842826543,0,2.84702394223022,2.64315307264903,1.18805874903981,0.209088296014469,0.655087691238533,0.404593039154462,0.743881101528023,0.523511883968059,0.777689839750757,0.621339313086926,0,1.19613236835183,0.827292452285488,2.13896307178452,1.54991788173277,3.04121025883401,2.69921648885234,4.29674469985035,2.41176492179135,0.724752362478018,1.15212002503146,8.53230025696081,3.04087822935246,2.2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| ||
|short_description=p3@Zyx | |short_description=p3@Zyx | ||
}} | }} |
Latest revision as of 05:46, 27 September 2015
Short description: | p3@Zyx |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zyx_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000070635, NM_011777, uc009bqy.1, uc009bqz.1, uc009bra.1, uc009brb.1_5end |
EntrezGene: | Zyx |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.50e-12 | 33 |
neuronal stem cell | 5.50e-12 | 33 |
neuroblast | 5.50e-12 | 33 |
electrically signaling cell | 5.50e-12 | 33 |
neural cell | 2.31e-09 | 43 |
ectodermal cell | 2.63e-09 | 44 |
neurectodermal cell | 2.63e-09 | 44 |
electrically responsive cell | 1.19e-08 | 39 |
electrically active cell | 1.19e-08 | 39 |
autonomic neuron | 6.26e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.50e-14 | 73 |
nervous system | 2.87e-13 | 75 |
ectoderm-derived structure | 2.00e-11 | 95 |
ectoderm | 2.00e-11 | 95 |
presumptive ectoderm | 2.00e-11 | 95 |
neurectoderm | 4.31e-11 | 64 |
neural plate | 4.31e-11 | 64 |
presumptive neural plate | 4.31e-11 | 64 |
structure with developmental contribution from neural crest | 5.05e-09 | 92 |
ecto-epithelium | 7.03e-09 | 73 |
regional part of nervous system | 7.83e-08 | 54 |
neural tube | 1.17e-07 | 52 |
neural rod | 1.17e-07 | 52 |
future spinal cord | 1.17e-07 | 52 |
neural keel | 1.17e-07 | 52 |
autonomic nervous system | 6.26e-07 | 9 |