FFCP PHASE1:Mm9::chr7:53176021..53176038,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13732 | |EntrezGene=13732 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3630 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UIF8,O35912 | |UniProt=Q3UIF8,O35912 | ||
|association_with_transcript=180bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end | |association_with_transcript=180bp_to_ENSMUST00000164119,NM_001146346,uc009gxv.2_5end | ||
|cluster_id=chr7:53176021..53176038,- | |||
|description=CAGE_peak_5_at_Emp3_5end | |description=CAGE_peak_5_at_Emp3_5end | ||
|id=chr7:53176021..53176038,- | |id=chr7:53176021..53176038,- | ||
|ontology_enrichment_celltype=CL:0000144!6.69e-10!121;CL:0000012!6.69e-10!121;CL:0000219!1.15e-09!54;CL:0000548!5.44e-09!115;CL:0000004!5.44e-09!115;CL:0000255!5.44e-09!115;CL:0002371!2.38e-08!118;CL:0000034!3.55e-08!97;CL:0002320!7.55e-07!46;CL:0000134!7.55e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.97e-18,54;CL:0000034,5.20e-15,97;CL:0000333,1.42e-13,10;CL:0000095,1.42e-13,10;CL:0000243,1.42e-13,10;CL:0000123,1.42e-13,10;CL:0000125,1.42e-13,10;CL:0000030,1.42e-13,10;CL:0000339,1.42e-13,10;CL:0000723,1.62e-12,91;CL:0000048,1.62e-12,91;CL:0002320,1.12e-11,46;CL:0000134,1.12e-11,46;CL:0002453,2.32e-09,8;CL:0002321,9.15e-09,70;CL:0000107,5.03e-08,9;CL:0000557,7.93e-08,7;CL:0002319,4.92e-07,43;CL:0000068,5.17e-07,3;CL:0002202,5.17e-07,3;CL:0000069,5.17e-07,3;CL:0002632,5.17e-07,3;CL:0002368,5.17e-07,3;CL:0000307,5.17e-07,3;CL:0000377,5.17e-07,3;CL:0002092,6.28e-07,3;CL:0002540,6.28e-07,3;CL:0000192,7.61e-07,3;CL:0000359,7.61e-07,3;CL:0002539,7.61e-07,3;CL:0000514,7.61e-07,3;CL:0000221,8.33e-07,44;CL:0000133,8.33e-07,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!3.83e-08!11;UBERON:0002384!7.55e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.83e-12,11;UBERON:0002384,1.12e-11,46;UBERON:0002410,5.03e-08,9;UBERON:0002371,1.57e-07,16;UBERON:0000011,1.92e-07,3;UBERON:0002204,4.03e-07,32;UBERON:0003126,5.17e-07,3;UBERON:0001005,5.17e-07,3;UBERON:0007196,5.17e-07,3;UBERON:0001558,5.17e-07,3;UBERON:0001135,7.61e-07,3;UBERON:0004237,7.61e-07,3;UBERON:0004695,7.61e-07,3;UBERON:0002111,7.61e-07,3;UBERON:0004178,7.61e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,19.7104211012333,14.2779361056416,0.856089841127525,2.23362045186942,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.72340783073175,1.28482726513177,0,0,1.97717564461025,1.55543919259427,1.25987779462826,1.43752564364972,0.167782606057736,0,0,1.02903774414379,0.286533439938757,0,0,0,0,5.42151251310611,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,6.89080254192331,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,38.9989895665898,23.5783267533171,0.579728977403356,0,0,0,0,0,0.280888840263504,5.62420064507591,5.71529210126311,7.0667914902068,0,0,0,0,2.38140145112336,1.01343946190039,3.0331466700887,0.22836775943812,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,1.67741174308288,1.19980546198682,1.01656181658452,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,1.63171705145613,0.491764273019036,0,0.160550589987792,0,5.90165803356032,0,0,0.780877488593277,0.215423397732799,1.67278158566786,3.34198011123591,3.39691836946599,1.61924280669958,1.16902343164525,1.58115111178609,0.642642632843614,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.32977250588296,0.807322133479528,0.241251699712623,0.358117032009409,0,0,0,0,0,0,0,0.136694227721025,0,4.58941760983409,2.79902904647316,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.62799699626633,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,1.14772999241306,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,19.7104211012333,14.2779361056416,0.856089841127525,2.23362045186942,0,0,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.72340783073175,1.28482726513177,0,0,1.97717564461025,1.55543919259427,1.25987779462826,1.43752564364972,0.167782606057736,0,0,1.02903774414379,0.286533439938757,0,0,0,0,5.42151251310611,0.889294796111139,1.7997994345628,1.97773272513395,1.4209602298922,6.89080254192331,5.76327457982332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,38.9989895665898,23.5783267533171,0.579728977403356,0,0,0,0,0,0.280888840263504,5.62420064507591,5.71529210126311,7.0667914902068,0,0,0,0,2.38140145112336,1.01343946190039,3.0331466700887,0.22836775943812,0.258937883647172,0.742210695324124,0.693941307064543,0.304465478312141,0.230615497256059,0.452167921657868,0.117588707135705,0.125666591329675,0,0.289198713839823,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,1.67741174308288,1.19980546198682,1.01656181658452,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0.205782136407943,0.199034266818493,2.1066395619397,1.02939162845886,0.568326998791185,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0,0,0,1.63171705145613,0.491764273019036,0,0.160550589987792,0,5.90165803356032,0,0,0.780877488593277,0.215423397732799,1.67278158566786,3.34198011123591,3.39691836946599,1.61924280669958,1.16902343164525,1.58115111178609,0.642642632843614,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0.469343416127421,0,0,0.32977250588296,0.807322133479528,0.241251699712623,0.358117032009409,0,0,0,0,0,0,0,0.136694227721025,0,4.58941760983409,2.79902904647316,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258319646955462,0,0,0,0,0.241584120826006,0.576060012515731,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0.0762068066549998,0,0.194915761479505,0.0962118416403295,0,0.226730383615211,0.221985953374065,0.62799699626633,0.167884616364078,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0,0.214871054048298,1.14772999241306,0,0.231867835620421 | ||
|short_description=p5@Emp3 | |short_description=p5@Emp3 | ||
}} | }} |
Latest revision as of 22:06, 26 September 2015
Short description: | p5@Emp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Emp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3630 |
Association with transcript: | 180bp_to_ENSMUST00000164119, NM_001146346, uc009gxv.2_5end |
EntrezGene: | Emp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.83e-12 | 11 |
connective tissue | 1.12e-11 | 46 |
autonomic nervous system | 5.03e-08 | 9 |
bone marrow | 1.57e-07 | 16 |
parasympathetic nervous system | 1.92e-07 | 3 |
musculoskeletal system | 4.03e-07 | 32 |
trachea | 5.17e-07 | 3 |
respiratory airway | 5.17e-07 | 3 |
tracheobronchial tree | 5.17e-07 | 3 |
lower respiratory tract | 5.17e-07 | 3 |
smooth muscle tissue | 7.61e-07 | 3 |
blood vessel smooth muscle | 7.61e-07 | 3 |
arterial system smooth muscle | 7.61e-07 | 3 |
artery smooth muscle tissue | 7.61e-07 | 3 |
aorta smooth muscle tissue | 7.61e-07 | 3 |