FFCP PHASE1:Mm9::chr8:87493517..87493535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100504815,21672 | |EntrezGene=100504815,21672 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2912 | |||
|TSSclassifier=NA | |||
|UniProt=Q61171 | |UniProt=Q61171 | ||
|association_with_transcript=7bp_to_ENSMUST00000005292_5end | |association_with_transcript=7bp_to_ENSMUST00000005292_5end | ||
|cluster_id=chr8:87493517..87493535,+ | |||
|description=CAGE_peak_2_at_LOC100504815_5end,CAGE_peak_4_at_Prdx2_5end | |description=CAGE_peak_2_at_LOC100504815_5end,CAGE_peak_4_at_Prdx2_5end | ||
|id=chr8:87493517..87493535,+ | |id=chr8:87493517..87493535,+ | ||
|ontology_enrichment_celltype=CL:0000221!2.51e-19!44;CL:0000133!2.51e-19!44;CL:0002319!1.11e-18!43;CL:0000055!2.31e-17!50;CL:0000540!5.30e-15!33;CL:0000047!5.30e-15!33;CL:0000031!5.30e-15!33;CL:0000404!5.30e-15!33;CL:0000393!1.67e-14!39;CL:0000211!1.67e-14!39;CL:0002321!8.37e-11!70;CL:0000220!8.37e-11!70;CL:0000117!1.16e-10!23;CL:0000337!1.16e-10!23;CL:0000548!9.06e-09!115;CL:0000004!9.06e-09!115;CL:0000255!9.06e-09!115;CL:0000144!1.81e-08!121;CL:0000012!1.81e-08!121;CL:0000723!7.06e-08!91;CL:0000048!7.06e-08!91;CL:0000034!1.32e-07!97;CL:0002371!1.35e-07!118 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.51e-19,44;CL:0000133,2.51e-19,44;CL:0002319,1.11e-18,43;CL:0000540,5.30e-15,33;CL:0000047,5.30e-15,33;CL:0000031,5.30e-15,33;CL:0000404,5.30e-15,33;CL:0000393,1.67e-14,39;CL:0000211,1.67e-14,39;CL:0002321,8.27e-11,70;CL:0000117,1.16e-10,23;CL:0000337,1.16e-10,23;CL:0000723,7.14e-08,91;CL:0000048,7.14e-08,91;CL:0000034,1.34e-07,97 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.25e-11!73;UBERON:0005743!3.25e-11!73;UBERON:0000073!3.32e-11!75;UBERON:0001016!3.32e-11!75;UBERON:0004121!1.97e-07!102;UBERON:0000924!1.97e-07!102;UBERON:0006601!1.97e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.25e-11,73;UBERON:0001016,3.32e-11,75;UBERON:0010314,6.88e-11,92;UBERON:0004121,2.03e-08,95;UBERON:0000924,2.03e-08,95;UBERON:0006601,2.03e-08,95;UBERON:0002346,3.52e-07,64;UBERON:0003075,3.52e-07,64;UBERON:0007284,3.52e-07,64 | |||
|phase1_expression=44.0409329538183,9.77131141390211,10.4649825059593,5.74682001482977,7.51343594919521,16.6200479192771,21.4923629347884,14.4618122254565,0.84473233291,0.936258105287974,7.0199366972457,8.69516533049167,11.641649635322,7.60557501045277,20.3196954707554,17.412872995525,27.2829132469977,7.72882305127682,8.22686601634433,8.06340338416257,11.7359740408476,26.808556824239,32.9111734315059,22.5589316138703,23.6291559499185,23.5435105287158,25.8457197695445,21.331652035903,21.6626698180266,20.4144405105544,29.4901579171555,25.4012269383852,22.1423323530445,15.8481681015439,30.6182716936351,26.0988393212833,27.5628630954198,6.27797446105362,8.5946887897618,4.18818995179039,0.588231488031014,1.36609096991689,2.42755176515577,24.1721890513108,26.5607559795128,32.304228380456,41.4667412504461,61.9191444120468,30.0970070346226,34.4140921361482,35.5565510928421,67.5637052515366,8.89247812106003,12.3311564141929,8.06625117941913,11.3194151855817,19.1977404758967,14.9544906760458,72.0246600660168,60.3049716370117,95.0747105259269,50.4878352783007,43.5754450094458,25.6471419425199,18.7884608887725,26.9982443679518,29.9600110518405,41.8797952800494,72.8937974528598,72.2281770074545,95.277207492176,43.7046006137819,43.2902340265163,101.544872549197,94.6953253660175,116.740785899473,13.2139057199266,18.7700386985226,17.2039317246993,64.2286221246044,70.8114361482651,55.7377306495733,30.4309468911505,25.3243174514256,20.6277634498694,27.4004584490511,30.1827963294098,52.1918448310842,13.7821671866395,23.8806129937442,10.1452571045587,8.60423876981386,6.79971333707751,9.17495425784289,2.59910566979068,4.03224198387602,12.6399978118577,16.7021716126497,26.2383864648897,27.2071472372962,50.9853179591583,14.115912515575,5.09610479413291,0,20.1336668140429,16.7217511213565,16.1767822404731,7.87868770061514,3.36619248741323,8.90652834388949,18.0424739836781,15.5277393939192,13.6063143381075,12.0578112442098,10.8181610564848,14.325991411583,4.20231445148436,5.78397427679647,8.84610551949874,13.1031148457401,8.17113618303456,10.6672555689749,1.86391761218122,9.66176630138106,8.79676168616511,7.66371165625774,31.2717474960452,47.9922184794726,28.4637308643665,10.9347166765521,14.640019290196,28.6491922817331,11.6462294528825,11.2514801225345,12.6750707181332,12.4925772562173,21.1825876808658,12.3162900903992,12.3834151632501,1.68353484709179,34.6120378280792,54.7167008551666,39.9737928167875,26.976162392593,24.7652856910833,26.9038812598185,29.0475346135159,9.8307280880826,32.1196309469935,27.231275544166,23.7534017621331,26.9610750885917,21.409638190371,16.3678518265418,13.9931852757402,22.6899064173082,22.4708219940235,25.4774428043568,19.6072814582959,33.9686266958223,22.2799756982041,42.8547706277215,29.3563472125661,36.9916755685119,34.4015661738853,33.2523540993083,34.3389953791513,43.2031766758527,41.6336420281106,45.1460526217512,26.9148447692241,28.5089975479398,34.469368100695,24.8281874706688,10.7247873767705,22.9477285605804,2.64335026387038,12.6936271998501,32.6331023318908,24.384850545346,18.0414445850931,11.8993279527772,13.5650606745371,11.4135375667535,7.59246498471219,14.1641101062649,10.8074139784116,13.9269530428806,13.8424501854575,11.6846523125049,6.91641759599022,7.16908583715722,34.898893775367,21.9357144210679,28.1769339182701,22.1979947351393,20.9468686141036,19.6380295692892,16.3782631151826,11.8088118383682,15.8568715119789,11.7227305725711,3.55743152504579,13.6812986687197,16.1178375992826,12.8171404059367,13.9973483758067,15.9176925436595,18.5876871800436,13.5217184601881,7.7824908852017,13.453509246216,4.31304619582064,6.32639611036456,6.86482880852033,5.55673531483646,4.66433275156972,1.92977408545347,9.23765950833023,33.1609970598348,24.4447464663039,24.4432923516271,23.2343345805617,17.7556632888325,15.7108802984769,7.41507861859636,12.2955412402829,15.2810635857655,11.4807433433391,7.20998584749247,8.11619414769709,9.69148692496127,15.0791283939272,12.5098307278303,1.96705709207614,5.79467167239938,12.5229460190478,10.4318401067061,30.327964894685,9.3414243065618,47.3262329124385,36.3108032195874,32.9597798531182,33.2166629154047,41.6633520534077,30.8553418559827,28.3367491172426,30.3946092227764,30.4371589018823,15.1021018718249,11.9229671574946,25.9975781354193,19.220661203722,11.3829384851049,5.30980553359851,25.977528068583,21.7672961014621,10.5618844663303,14.7650946440386,6.7635732547664,9.56184684722418,11.9966130727577,14.2598951353889,6.0046984007805,3.16255825724996,3.09406629744561,14.6389030474129,32.7711191136985,47.9920716834019,46.2967995668239,37.9508099994465,24.6148968290857,30.2770197907903,38.0581186393249,4.69343416127421,2.75381692122966,5.29268155331909,4.9465875882444,10.6566521619298,9.77069383836125,13.7278195603607,9.19189038572343,8.16146342563582,7.78786268444141,11.2774781326583,23.1153292118809,12.4080333337707,15.0694765603753,10.935538217682,16.2432502976631,32.6358585588202,28.1302419170553,36.3465931105635,6.68269432610579,27.6793994383493,19.7219883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| |phase1_expression=44.0409329538183,9.77131141390211,10.4649825059593,5.74682001482977,7.51343594919521,16.6200479192771,21.4923629347884,14.4618122254565,0.84473233291,0.936258105287974,7.0199366972457,8.69516533049167,11.641649635322,7.60557501045277,20.3196954707554,17.412872995525,27.2829132469977,7.72882305127682,8.22686601634433,8.06340338416257,11.7359740408476,26.808556824239,32.9111734315059,22.5589316138703,23.6291559499185,23.5435105287158,25.8457197695445,21.331652035903,21.6626698180266,20.4144405105544,29.4901579171555,25.4012269383852,22.1423323530445,15.8481681015439,30.6182716936351,26.0988393212833,27.5628630954198,6.27797446105362,8.5946887897618,4.18818995179039,0.588231488031014,1.36609096991689,2.42755176515577,24.1721890513108,26.5607559795128,32.304228380456,41.4667412504461,61.9191444120468,30.0970070346226,34.4140921361482,35.5565510928421,67.5637052515366,8.89247812106003,12.3311564141929,8.06625117941913,11.3194151855817,19.1977404758967,14.9544906760458,72.0246600660168,60.3049716370117,95.0747105259269,50.4878352783007,43.5754450094458,25.6471419425199,18.7884608887725,26.9982443679518,29.9600110518405,41.8797952800494,72.8937974528598,72.2281770074545,95.277207492176,43.7046006137819,43.2902340265163,101.544872549197,94.6953253660175,116.740785899473,13.2139057199266,18.7700386985226,17.2039317246993,64.2286221246044,70.8114361482651,55.7377306495733,30.4309468911505,25.3243174514256,20.6277634498694,27.4004584490511,30.1827963294098,52.1918448310842,13.7821671866395,23.8806129937442,10.1452571045587,8.60423876981386,6.79971333707751,9.17495425784289,2.59910566979068,4.03224198387602,12.6399978118577,16.7021716126497,26.2383864648897,27.2071472372962,50.9853179591583,14.115912515575,5.09610479413291,0,20.1336668140429,16.7217511213565,16.1767822404731,7.87868770061514,3.36619248741323,8.90652834388949,18.0424739836781,15.5277393939192,13.6063143381075,12.0578112442098,10.8181610564848,14.325991411583,4.20231445148436,5.78397427679647,8.84610551949874,13.1031148457401,8.17113618303456,10.6672555689749,1.86391761218122,9.66176630138106,8.79676168616511,7.66371165625774,31.2717474960452,47.9922184794726,28.4637308643665,10.9347166765521,14.640019290196,28.6491922817331,11.6462294528825,11.2514801225345,12.6750707181332,12.4925772562173,21.1825876808658,12.3162900903992,12.3834151632501,1.68353484709179,34.6120378280792,54.7167008551666,39.9737928167875,26.976162392593,24.7652856910833,26.9038812598185,29.0475346135159,9.8307280880826,32.1196309469935,27.231275544166,23.7534017621331,26.9610750885917,21.409638190371,16.3678518265418,13.9931852757402,22.6899064173082,22.4708219940235,25.4774428043568,19.6072814582959,33.9686266958223,22.2799756982041,42.8547706277215,29.3563472125661,36.9916755685119,34.4015661738853,33.2523540993083,34.3389953791513,43.2031766758527,41.6336420281106,45.1460526217512,26.9148447692241,28.5089975479398,34.469368100695,24.8281874706688,10.7247873767705,22.9477285605804,2.64335026387038,12.6936271998501,32.6331023318908,24.384850545346,18.0414445850931,11.8993279527772,13.5650606745371,11.4135375667535,7.59246498471219,14.1641101062649,10.8074139784116,13.9269530428806,13.8424501854575,11.6846523125049,6.91641759599022,7.16908583715722,34.898893775367,21.9357144210679,28.1769339182701,22.1979947351393,20.9468686141036,19.6380295692892,16.3782631151826,11.8088118383682,15.8568715119789,11.7227305725711,3.55743152504579,13.6812986687197,16.1178375992826,12.8171404059367,13.9973483758067,15.9176925436595,18.5876871800436,13.5217184601881,7.7824908852017,13.453509246216,4.31304619582064,6.32639611036456,6.86482880852033,5.55673531483646,4.66433275156972,1.92977408545347,9.23765950833023,33.1609970598348,24.4447464663039,24.4432923516271,23.2343345805617,17.7556632888325,15.7108802984769,7.41507861859636,12.2955412402829,15.2810635857655,11.4807433433391,7.20998584749247,8.11619414769709,9.69148692496127,15.0791283939272,12.5098307278303,1.96705709207614,5.79467167239938,12.5229460190478,10.4318401067061,30.327964894685,9.3414243065618,47.3262329124385,36.3108032195874,32.9597798531182,33.2166629154047,41.6633520534077,30.8553418559827,28.3367491172426,30.3946092227764,30.4371589018823,15.1021018718249,11.9229671574946,25.9975781354193,19.220661203722,11.3829384851049,5.30980553359851,25.977528068583,21.7672961014621,10.5618844663303,14.7650946440386,6.7635732547664,9.56184684722418,11.9966130727577,14.2598951353889,6.0046984007805,3.16255825724996,3.09406629744561,14.6389030474129,32.7711191136985,47.9920716834019,46.2967995668239,37.9508099994465,24.6148968290857,30.2770197907903,38.0581186393249,4.69343416127421,2.75381692122966,5.29268155331909,4.9465875882444,10.6566521619298,9.77069383836125,13.7278195603607,9.19189038572343,8.16146342563582,7.78786268444141,11.2774781326583,23.1153292118809,12.4080333337707,15.0694765603753,10.935538217682,16.2432502976631,32.6358585588202,28.1302419170553,36.3465931105635,6.68269432610579,27.6793994383493,19.7219883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| ||
|short_description=p2@LOC100504815,p4@Prdx2 | |short_description=p2@LOC100504815,p4@Prdx2 | ||
}} | }} |
Latest revision as of 22:11, 25 September 2015
Short description: | p2@LOC100504815, p4@Prdx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC100504815_5end, CAGE_peak_4_at_Prdx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2912 |
Association with transcript: | 7bp_to_ENSMUST00000005292_5end |
EntrezGene: | 100504815,21672 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.51e-19 | 44 |
neurectodermal cell | 2.51e-19 | 44 |
neural cell | 1.11e-18 | 43 |
neuron | 5.30e-15 | 33 |
neuronal stem cell | 5.30e-15 | 33 |
neuroblast | 5.30e-15 | 33 |
electrically signaling cell | 5.30e-15 | 33 |
electrically responsive cell | 1.67e-14 | 39 |
electrically active cell | 1.67e-14 | 39 |
embryonic cell | 8.27e-11 | 70 |
CNS neuron (sensu Vertebrata) | 1.16e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-10 | 23 |
somatic stem cell | 7.14e-08 | 91 |
multi fate stem cell | 7.14e-08 | 91 |
stem cell | 1.34e-07 | 97 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.25e-11 | 73 |
nervous system | 3.32e-11 | 75 |
structure with developmental contribution from neural crest | 6.88e-11 | 92 |
ectoderm-derived structure | 2.03e-08 | 95 |
ectoderm | 2.03e-08 | 95 |
presumptive ectoderm | 2.03e-08 | 95 |
neurectoderm | 3.52e-07 | 64 |
neural plate | 3.52e-07 | 64 |
presumptive neural plate | 3.52e-07 | 64 |