FF:10823-111C4: Difference between revisions

Revision as of 20:00, 9 July 2012

Name:	B lymphoblastoid cell line: GM12878 ENCODE, biol_rep3
Species:	Human (Homo sapiens)
Library ID:	{{{library_id}}}
Sample type:	{{{sample_category}}}
Genomic View:	UCSC
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	blood
dev stage	NA
sex	female
age	NA
cell type	b cell
cell line	GM12878
company	NA
collaboration	Carrie Davis (Cold spring Harbor Laboratories)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	NA
catalog number	NA
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	0.0569
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0.0329
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.687
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0.0329
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0.0329
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0.0329
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0.0329
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0.0399
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0921
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0.0329
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	0.195
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0.397
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0.0329
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.0673
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0.0329
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.0775
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0.0329
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0.0635
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.748
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0.157
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.0329
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0.0131
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0785
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.00267
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0.168
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0.0329
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.609
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0.119
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0.0255
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0.034
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0.65
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0.0921
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0.397
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0.0921
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data no result for this sample

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12333

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.00372
MA0003.1	MA0003.1	0.75
MA0004.1	MA0004.1	0.0824
MA0006.1	MA0006.1	0.221
MA0007.1	MA0007.1	0.321
MA0009.1	MA0009.1	0.815
MA0014.1	MA0014.1	0.455
MA0017.1	MA0017.1	0.0117
MA0018.2	MA0018.2	0.414
MA0019.1	MA0019.1	0.34
MA0024.1	MA0024.1	1.86554e-7
MA0025.1	MA0025.1	0.113
MA0027.1	MA0027.1	0.821
MA0028.1	MA0028.1	6.51584e-6
MA0029.1	MA0029.1	0.654
MA0030.1	MA0030.1	0.00695
MA0031.1	MA0031.1	0.037
MA0035.2	MA0035.2	0.985
MA0038.1	MA0038.1	0.798
MA0039.2	MA0039.2	0.547
MA0040.1	MA0040.1	0.108
MA0041.1	MA0041.1	0.125
MA0042.1	MA0042.1	0.201
MA0043.1	MA0043.1	0.126
MA0046.1	MA0046.1	0.00215
MA0047.2	MA0047.2	0.355
MA0048.1	MA0048.1	0.641
MA0050.1	MA0050.1	1.0834e-18
MA0051.1	MA0051.1	5.14882e-13
MA0052.1	MA0052.1	0.645
MA0055.1	MA0055.1	0.0387
MA0057.1	MA0057.1	0.791
MA0058.1	MA0058.1	0.0492
MA0059.1	MA0059.1	0.00103
MA0060.1	MA0060.1	1.45415e-4
MA0061.1	MA0061.1	1.36948e-12
MA0062.2	MA0062.2	1.31728e-11
MA0065.2	MA0065.2	0.0229
MA0066.1	MA0066.1	0.536
MA0067.1	MA0067.1	0.649
MA0068.1	MA0068.1	0.0651
MA0069.1	MA0069.1	0.135
MA0070.1	MA0070.1	0.396
MA0071.1	MA0071.1	0.519
MA0072.1	MA0072.1	0.964
MA0073.1	MA0073.1	0.553
MA0074.1	MA0074.1	0.656
MA0076.1	MA0076.1	6.42556e-9
MA0077.1	MA0077.1	0.273
MA0078.1	MA0078.1	0.0914
MA0079.2	MA0079.2	0.188
MA0080.2	MA0080.2	1.87391e-7
MA0081.1	MA0081.1	0.00659
MA0083.1	MA0083.1	0.703
MA0084.1	MA0084.1	0.584
MA0087.1	MA0087.1	0.397
MA0088.1	MA0088.1	0.00781
MA0090.1	MA0090.1	6.74515e-6
MA0091.1	MA0091.1	0.463
MA0092.1	MA0092.1	0.514
MA0093.1	MA0093.1	0.0663
MA0099.2	MA0099.2	0.00583
MA0100.1	MA0100.1	0.0908
MA0101.1	MA0101.1	1.00389e-15
MA0102.2	MA0102.2	0.251
MA0103.1	MA0103.1	0.0284
MA0104.2	MA0104.2	7.11853e-4
MA0105.1	MA0105.1	9.7883e-11
MA0106.1	MA0106.1	0.126
MA0107.1	MA0107.1	3.71982e-16
MA0108.2	MA0108.2	4.64814e-7
MA0111.1	MA0111.1	0.273
MA0112.2	MA0112.2	0.179
MA0113.1	MA0113.1	0.524
MA0114.1	MA0114.1	0.0108
MA0115.1	MA0115.1	0.287
MA0116.1	MA0116.1	3.63585e-5
MA0117.1	MA0117.1	0.682
MA0119.1	MA0119.1	0.827
MA0122.1	MA0122.1	0.54
MA0124.1	MA0124.1	0.975
MA0125.1	MA0125.1	0.148
MA0131.1	MA0131.1	0.0975
MA0135.1	MA0135.1	0.553
MA0136.1	MA0136.1	6.16271e-11
MA0137.2	MA0137.2	0.402
MA0138.2	MA0138.2	0.402
MA0139.1	MA0139.1	0.152
MA0140.1	MA0140.1	0.829
MA0141.1	MA0141.1	0.0943
MA0142.1	MA0142.1	0.321
MA0143.1	MA0143.1	0.701
MA0144.1	MA0144.1	0.332
MA0145.1	MA0145.1	0.589
MA0146.1	MA0146.1	0.433
MA0147.1	MA0147.1	1.64279e-4
MA0148.1	MA0148.1	0.244
MA0149.1	MA0149.1	0.431
MA0150.1	MA0150.1	0.947
MA0152.1	MA0152.1	0.409
MA0153.1	MA0153.1	0.706
MA0154.1	MA0154.1	1.16227e-4
MA0155.1	MA0155.1	0.601
MA0156.1	MA0156.1	7.72609e-12
MA0157.1	MA0157.1	0.0673
MA0159.1	MA0159.1	0.219
MA0160.1	MA0160.1	0.0544
MA0162.1	MA0162.1	0.66
MA0163.1	MA0163.1	1.28251e-10
MA0164.1	MA0164.1	0.923
MA0258.1	MA0258.1	0.053
MA0259.1	MA0259.1	0.0305

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12333

Novel motif	Logo	P-value
1	1	0.00798
10	10	0.026
100	100	0.387
101	101	0.222
102	102	0.542
103	103	0.164
104	104	0.556
105	105	0.639
106	106	0.899
107	107	0.56
108	108	0.943
109	109	0.0728
11	11	0.252
110	110	0.154
111	111	0.0613
112	112	0.157
113	113	0.579
114	114	0.48
115	115	0.428
116	116	0.495
117	117	0.0215
118	118	0.129
119	119	0.228
12	12	0.983
120	120	0.374
121	121	0.964
122	122	0.594
123	123	3.87578e-5
124	124	0.0505
125	125	0.443
126	126	0.287
127	127	0.301
128	128	0.662
129	129	0.681
13	13	0.0845
130	130	0.62
131	131	0.424
132	132	0.672
133	133	0.659
134	134	0.666
135	135	0.995
136	136	0.102
137	137	0.741
138	138	0.924
139	139	0.406
14	14	0.774
140	140	0.291
141	141	0.0513
142	142	0.763
143	143	0.495
144	144	0.661
145	145	0.0604
146	146	0.758
147	147	0.25
148	148	0.0662
149	149	0.371
15	15	0.0611
150	150	0.985
151	151	0.682
152	152	0.0703
153	153	0.852
154	154	0.993
155	155	0.116
156	156	0.777
157	157	0.124
158	158	0.854
159	159	0.129
16	16	0.9
160	160	0.194
161	161	0.0311
162	162	0.951
163	163	0.743
164	164	0.128
165	165	0.646
166	166	0.289
167	167	0.32
168	168	0.277
169	169	0.659
17	17	0.868
18	18	0.802
19	19	0.584
2	2	0.621
20	20	0.299
21	21	0.177
22	22	0.992
23	23	0.294
24	24	0.192
25	25	0.093
26	26	0.0622
27	27	0.519
28	28	0.375
29	29	0.0279
3	3	0.0553
30	30	0.106
31	31	0.765
32	32	0.425
33	33	0.293
34	34	0.604
35	35	0.161
36	36	0.0353
37	37	0.366
38	38	0.39
39	39	0.439
4	4	0.788
40	40	0.434
41	41	0.759
42	42	0.0758
43	43	0.452
44	44	0.177
45	45	0.38
46	46	0.239
47	47	0.0382
48	48	0.062
49	49	0.316
5	5	0.681
50	50	0.879
51	51	0.755
52	52	0.252
53	53	0.34
54	54	0.658
55	55	0.456
56	56	0.773
57	57	0.213
58	58	0.0771
59	59	0.32
6	6	0.872
60	60	0.855
61	61	0.136
62	62	0.0874
63	63	0.727
64	64	0.214
65	65	0.982
66	66	0.389
67	67	0.8
68	68	0.0539
69	69	0.501
7	7	0.114
70	70	0.454
71	71	0.0165
72	72	0.302
73	73	0.866
74	74	0.826
75	75	0.00987
76	76	0.507
77	77	0.562
78	78	0.0159
79	79	0.855
8	8	0.722
80	80	0.104
81	81	0.454
82	82	0.719
83	83	0.402
84	84	0.218
85	85	0.243
86	86	0.348
87	87	0.126
88	88	0.692
89	89	0.957
9	9	0.914
90	90	0.329
91	91	0.552
92	92	0.722
93	93	0.268
94	94	0.783
95	95	0.0207
96	96	0.807
97	97	0.148
98	98	0.509
99	99	0.289

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12333

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0102062 B-lymphoblastoid cell line sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000945 (lymphocyte of B lineage)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0101035 (hematopoietic cell line sample)
0100773 (lymphoblastoid cell line sample)
0101522 (B-lymphocyte cell line sample)
0102062 (B-lymphoblastoid cell line sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)

@@ Line 10: / Line 10: @@
 |def=
 |expression_enrichment_score=chr6:391743..391759,+!p1@IRF4!2.60!396.47!IRF4;;chr2:68592406..68592424,+!p1@PLEK!2.42!264.31!PLEK;;chr11:111249993..111250006,-!p1@POU2AF1!2.40!250.46!POU2AF1;;chr19:50922187..50922204,+!p1@SPIB!2.08!119.64!SPIB;;chr16:85932760..85932775,+!p1@IRF8!2.02!104.92!IRF8;;chr1:25291475..25291511,-!p2@RUNX3!2.01!101.46!RUNX3;;chr12:103351444..103351461,+!p1@ASCL1!1.98!94.85!ASCL1;;chr3:27763807..27763822,-!p1@EOMES!1.91!80.99!EOMES;;chr17:38020392..38020477,-!p1@IKZF3!1.87!73.83!IKZF3;;chr2:231090433..231090469,+!p1@SP140!1.85!69.11!SP140;;chr2:231090471..231090504,+!p2@SP140!1.77!57.54!SP140;;chr1:25256756..25256774,-!p1@RUNX3!1.69!88.23!RUNX3;;chr7:28610099..28610113,+!p5@CREB5!1.67!45.57!CREB5;;chr2:68592394..68592405,+!p2@PLEK!1.60!38.96!PLEK;;chr10:64576105..64576133,-!p1@EGR2!1.57!72.57!EGR2;;chr19:36204309..36204335,+!p1@ZBTB32!1.57!36.21!ZBTB32;;chr1:158978768..158978800,+!p8@IFI16!1.53!32.74!IFI16;;chr3:189349162..189349207,+!p2@TP63!1.53!32.74!TP63;;chr8:76319876..76319926,+!p1@HNF4G!1.51!31.33!HNF4G;;chr3:27764190..27764208,-!p2@EOMES!1.50!30.93!EOMES;;chr5:88120151..88120177,-!p6@MEF2C!1.46!27.86!MEF2C;;chr12:103352277..103352324,+!p2@ASCL1!1.46!27.78!ASCL1;;chr17:36105042..36105060,-!p1@HNF1B!1.46!27.63!HNF1B;;chr14:75988771..75988826,+!p1@BATF!1.45!36.21!BATF;;chr1:3569072..3569093,+!p1@TP73!1.44!26.76!TP73;;chr20:50159198..50159299,-!p1@NFATC2!1.42!36.84!NFATC2;;chr19:42636586..42636607,-!p1@POU2F2!1.38!62.73!POU2F2;;chrX:2418949..2419024,-!p1@DHRSX,p1@ZBED1!1.38!23.14!ZBED1;;chr7:50348268..50348366,+!p4@IKZF1!1.38!22.90!IKZF1;;chr17:45810594..45810608,+!p1@TBX21!1.37!22.20!TBX21;;chr9:37034469..37034474,-!p1@PAX5!1.36!22.04!PAX5;;chr11:61520075..61520136,+!p1@C11orf9!1.32!41.24!C11orf9;;chr4:185395590..185395627,-!p3@IRF2!1.32!24.79!IRF2;;chr8:72756637..72756664,-!p3@MSC!1.32!22.75!MSC;;chr11:47400078..47400106,-!p1@SPI1!1.32!20.07!SPI1;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!1.32!19.99!MEF2B;;chr18:52989031..52989079,-!p2@TCF4!1.28!41.80!TCF4;;chr8:72756667..72756736,-!p2@MSC!1.23!24.95!MSC;;chr8:76319850..76319870,+!p4@HNF4G!1.23!16.06!HNF4G;;chr5:158526917..158526932,-!p1@EBF1!1.22!38.25!EBF1;;chr3:101546827..101546847,+!p2@NFKBIZ!1.21!21.17!NFKBIZ;;chr5:142780237..142780261,-!p7@NR3C1!1.21!15.03!NR3C1;;chr7:28610060..28610073,+!p9@CREB5!1.20!14.72!CREB5;;chr8:135614084..135614119,-!p4@ZFAT!1.19!14.33!ZFAT;;chr9:1050331..1050363,+!p1@DMRT2!1.16!13.46!DMRT2;;chr13:41593425..41593480,-!p1@ELF1!1.15!82.65!ELF1;;chr5:88178983..88179012,-!p1@MEF2C!1.14!99.18!MEF2C;;chr6:34204973..34204990,+!p4@HMGA1!1.13!166.32!HMGA1;;chr5:133450365..133450444,+!p1@TCF7!1.13!56.51!TCF7;;chr14:75988831..75988847,+!p2@BATF!1.13!12.52!BATF;;chr2:68615031..68615055,+!p3@PLEK!1.13!12.36!PLEK;;chr11:19262421..19262455,-!p3@E2F8!1.12!12.20!E2F8;;chr2:214015343..214015366,-!p3@IKZF2!1.10!11.49!IKZF2;;chr3:141105705..141105770,+!p4@ZBTB38!1.09!13.77!ZBTB38;;chr2:214015111..214015179,-!p1@IKZF2!1.07!19.52!IKZF2;;chr12:54447599..54447630,+!p3@HOXC4!1.07!13.38!HOXC4;;chr2:231090344..231090361,-!p3@SP110!1.07!10.86!SP110;;chr7:50344251..50344288,+!p3@IKZF1!1.06!10.39!IKZF1;;chr19:45579725..45579743,-!p1@ZNF296!1.05!46.83!ZNF296;;chr17:1959369..1959388,+!p2@HIC1!1.04!26.76!HIC1;;chr7:128577972..128578047,+!p1@IRF5!1.04!15.98!IRF5;;chr3:141747950..141748004,-!p7@TFDP2!1.04!10.07!TFDP2;;chr9:117150254..117150271,-!p1@AKNA!1.03!27.08!AKNA;;chr6:135502408..135502459,+!p2@MYB!1.03!11.41!MYB;;chr1:25291620..25291635,-!p4@RUNX3!1.02!9.37!RUNX3;;chr16:85936539..85936562,+!p3@IRF8!1.02!9.37!IRF8;;chr11:615570..615721,-!p2@IRF7!1.01!18.58!IRF7;;chr17:37934204..37934241,-!p3@IKZF3!1.00!9.05!IKZF3;;chr1:167298300..167298319,+!p2@POU2F1!1.00!9.05!POU2F1;;chr1:170632115..170632136,+!p9@PRRX1!1.00!9.05!PRRX1;;chr20:42543441..42543497,+!p1@TOX2!0.99!40.61!TOX2;;chr7:50344289..50344323,+!p1@IKZF1!0.99!8.82!IKZF1;;chr16:85936412..85936431,+!p2@IRF8!0.99!8.74!IRF8;;chr8:72756063..72756125,-!p1@MSC!0.98!17.47!MSC;;chr1:23857698..23857733,-!p1@E2F2!0.98!15.98!E2F2;;chr9:126774018..126774055,+!p1@LHX2!0.98!8.66!LHX2;;chr7:50343634..50343717,+!p2@IKZF1!0.98!8.58!IKZF1;;chr7:137620650..137620677,-!p3@CREB3L2!0.98!8.50!CREB3L2;;chr9:126773880..126773895,+!p2@LHX2!0.98!8.50!LHX2;;chr20:42295713..42295738,+!p2@MYBL2!0.97!50.69!MYBL2;;chr1:38512457..38512474,-!p1@POU3F1!0.96!8.97!POU3F1;;chr7:137620684..137620711,-!p4@CREB3L2!0.96!8.19!CREB3L2;;chr1:158979686..158979745,+!p1@IFI16!0.95!269.27!IFI16;;chr4:185395633..185395651,-!p2@IRF2!0.95!12.75!IRF2;;chr10:104155480..104155534,+!p2@NFKB2!0.94!51.32!NFKB2;;chr2:214016254..214016282,-!p7@IKZF2!0.94!7.71!IKZF2;;chr19:42627037..42627084,-!p3@POU2F2!0.94!7.71!POU2F2;;chr1:151319654..151319698,-!p2@RFX5!0.93!17.00!RFX5;;chr5:142780189..142780223,-!p6@NR3C1!0.93!7.56!NR3C1;;chr1:92951607..92951661,-!p1@GFI1!0.93!7.48!GFI1;;chr17:36105074..36105086,-!p2@HNF1B!0.92!7.40!HNF1B;;chr17:38020557..38020572,-!p4@IKZF3!0.92!7.40!IKZF3;;chr18:52989001..52989030,-!p10@TCF4!0.91!8.03!TCF4;;chr7:156803329..156803362,-!p1@MNX1!0.91!7.08!MNX1;;chr12:54447637..54447659,+!p4@HOXC4!0.90!6.93!HOXC4;;chr20:42295745..42295765,+!p1@MYBL2!0.89!117.52!MYBL2;;chr20:62680984..62680999,-!p1@SOX18!0.89!9.21!SOX18;;chr6:106546731..106546755,+!p5@PRDM1!0.89!6.77!PRDM1;;chr18:42260840..42260860,+!p2@SETBP1!0.89!6.77!SETBP1;;chr5:88179017..88179046,-!p2@MEF2C!0.88!27.71!MEF2C;;chr2:70314240..70314256,+!p4@PCBP1!0.88!13.93!PCBP1;;chr6:144385698..144385742,-!p2@PLAGL1!0.87!7.95!PLAGL1;;chr1:3569135..3569150,+!p3@TP73!0.87!6.45!TP73;;chr6:41700616..41700664,-!p8@TFEB!0.87!6.38!TFEB;;chr1:117602932..117602973,+!p1@TTF2!0.86!24.56!TTF2;;chr17:41277372..41277418,-!p1@BRCA1!0.86!23.77!BRCA1;;chr8:135614120..135614149,-!p5@ZFAT!0.86!6.30!ZFAT;;chr9:16728161..16728185,-!p4@BNC2!0.86!6.30!BNC2;;chr9:128509878..128509902,+!p5@PBX3!0.86!6.22!PBX3;;chr8:65492915..65492932,+!p1@BHLHE22!0.86!6.22!BHLHE22;;chr7:64126503..64126528,+!p1@ZNF107!0.85!45.34!ZNF107;;chr10:104154246..104154347,+!p3@NFKB2!0.85!39.36!NFKB2;;chr6:20402102..20402152,+!p1@E2F3!0.85!26.68!E2F3;;chr19:50432453..50432468,+!p1@ATF5!0.84!358.37!ATF5;;chr6:44233252..44233296,-!p1@NFKBIE!0.83!60.69!NFKBIE;;chr5:138609782..138609826,+!p5@MATR3!0.83!40.06!MATR3;;chr17:41623692..41623715,-!p1@ETV4!0.83!26.05!ETV4;;chr2:231084659..231084721,-!p1@SP110!0.82!141.21!SP110;;chr3:141747459..141747475,-!p1@TFDP2!0.82!50.37!TFDP2;;chr6:43337124..43337144,-!p4@ZNF318!0.82!8.26!ZNF318;;chr17:70117153..70117174,+!p1@SOX9!0.81!61.24!SOX9;;chr12:11802753..11802834,+!p2@ETV6!0.81!28.81!ETV6;;chr9:20622444..20622468,-!p2@MLLT3!0.81!18.73!MLLT3;;chr17:46655730..46655791,-!p1@HOXB4!0.81!14.33!HOXB4;;chr15:74833584..74833626,+!p1@ARID3B!0.81!13.54!ARID3B;;chr18:52989565..52989623,-!p9@TCF4!0.81!7.16!TCF4;;chr1:156460436..156460462,-!p7@MEF2D!0.80!5.35!MEF2D;;chr8:22550982..22550999,-!p1@EGR3!0.79!15.58!EGR3;;chr5:158526756..158526797,-!p3@EBF1!0.79!5.19!EBF1;;chr8:76452097..76452126,+!p2@HNF4G!0.79!5.19!HNF4G;;chr5:142780280..142780294,-!p16@NR3C1!0.79!5.12!NR3C1;;chr9:1050449..1050468,+!p2@DMRT2!0.79!5.12!DMRT2;;chr19:926001..926046,+!p1@ARID3A!0.78!18.97!ARID3A;;chr6:126240380..126240430,+!p2@NCOA7!0.78!13.85!NCOA7;;chr2:68615063..68615089,+!p4@PLEK!0.78!4.96!PLEK;;chr9:37034258..37034270,-!p3@PAX5!0.78!4.96!PAX5;;chr14:74226961..74227020,-!p1@C14orf43!0.77!35.18!C14orf43;;chr12:54785074..54785122,-!p2@ZNF385A!0.77!7.87!ZNF385A;;chr1:27023752..27023799,+!p4@ARID1A!0.77!6.61!ARID1A;;chr1:170632051..170632081,+!p16@PRRX1!0.77!4.88!PRRX1;;chr1:3568928..3568946,+!p4@TP73!0.77!4.88!TP73;;chr1:212873267..212873332,-!p1@BATF3!0.76!6.61!BATF3;;chr12:54447219..54447237,+!p6@HOXC4!0.76!4.72!HOXC4;;chr3:141103634..141103665,+!p18@ZBTB38!0.76!4.72!ZBTB38;;chr3:141121847..141121868,+!p5@ZBTB38!0.75!7.40!ZBTB38;;chr14:24630902..24630948,+!p2@IRF9!0.75!5.75!IRF9;;chr12:103352326..103352351,+!p3@ASCL1!0.75!4.64!ASCL1;;chr1:47779762..47779827,-!p1@STIL,p1@TAL1!0.74!22.83!TAL1;;chr6:157098579..157098634,+!p4@ARID1B!0.74!10.86!ARID1B;;chr6:135502501..135502546,+!p1@MYB!0.74!5.51!MYB;;chr8:135613895..135613921,-!p8@ZFAT!0.74!4.49!ZFAT;;chr1:201979703..201979721,+!p2@ELF3!0.74!4.49!ELF3;;chr9:2015335..2015370,+!p1@SMARCA2!0.73!59.74!SMARCA2;;chr9:20622478..20622525,-!p1@MLLT3!0.73!38.57!MLLT3;;chr6:43337180..43337244,-!p1@ZNF318!0.73!18.73!ZNF318;;chr1:8484314..8484348,-!p7@RERE!0.73!12.83!RERE;;chr6:106546808..106546833,+!p3@PRDM1!0.73!5.67!PRDM1;;chr1:3568870..3568881,+!p5@TP73!0.73!4.33!TP73;;chr3:189348969..189349018,+!p4@TP63!0.73!4.33!TP63;;chr16:31885093..31885165,+!p1@ZNF267!0.72!72.41!ZNF267;;chr19:45252008..45252024,+!p2@BCL3!0.72!15.58!BCL3;;chr4:146859626..146859669,-!p2@ZNF827!0.72!6.45!ZNF827;;chr6:126240463..126240489,+!p6@NCOA7!0.72!4.80!NCOA7;;chr1:3568889..3568900,+!p7@TP73!0.72!4.25!TP73;;chr9:16728327..16728338,-!p5@BNC2!0.72!4.25!BNC2;;chr17:41739283..41739297,-!p1@MEOX1!0.72!4.25!MEOX1;;chr6:15249128..15249177,+!p4@JARID2!0.71!7.95!JARID2;;chr1:170632028..170632043,+!p20@PRRX1!0.71!4.17!PRRX1;;chr1:3569101..3569115,+!p2@TP73!0.71!4.17!TP73;;chr11:19262461..19262476,-!p5@E2F8!0.71!4.17!E2F8;;chr8:76452129..76452159,+!p5@HNF4G!0.71!4.09!HNF4G;;chr3:141105235..141105307,+!p7@ZBTB38!0.71!4.09!ZBTB38;;chr19:42636625..42636632,-!p2@POU2F2!0.71!4.09!POU2F2;;chr2:97202480..97202499,+!p1@ARID5A!0.70!46.28!ARID5A;;chr12:2986275..2986363,-!p1@FOXM1!0.70!45.42!FOXM1;;chr9:3525910..3525955,-!p4@RFX3!0.70!13.38!RFX3;;chr1:170632137..170632172,+!p10@PRRX1!0.70!4.01!PRRX1;;chr1:25291648..25291665,-!p7@RUNX3!0.70!4.01!RUNX3;;chr15:60884706..60884743,-!p1@RORA!0.69!22.67!RORA;;chr19:19729477..19729542,-!p1@PBX4!0.69!8.97!PBX4;;chr20:44600199..44600219,-!p3@ZNF335!0.69!5.43!ZNF335;;chr14:55493763..55493824,-!p1@WDHD1!0.68!32.51!WDHD1;;chr3:48282587..48282603,+!p1@ZNF589!0.68!18.97!ZNF589;;chr9:2015306..2015323,+!p3@SMARCA2!0.68!11.10!SMARCA2;;chr14:74254460..74254476,-!p33@C14orf43!0.68!3.78!C14orf43;;chrX:131623044..131623089,-!p1@MBNL3!0.67!17.32!MBNL3;;chr15:90544532..90544563,+!p1@ZNF710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+|ffid_belonging_in_development=CL:0000134,CL:0000051
 |fonse_cell_line=FF:0101035,FF:0101522
 |fonse_cell_line_closure=FF:0101035,FF:0101522

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FF:10823-111C4: Difference between revisions

From FANTOM5_SSTAR

Revision as of 20:00, 9 July 2012

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0