FFCP PHASE1:Hg19::chr12:57443886..57443927,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.66e-09;12!CL:0002563;4.38e-08;4 | |ontology_enrichment_celltype_v019=CL:0000182;1.66e-09;12!CL:0002563;4.38e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.61e-09,12;CL:0000223,2.07e-08,58;CL:0002563,4.38e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.78e-16;11!UBERON:0009497;2.22e-13;13!UBERON:0006241;3.09e-10;3!UBERON:0003057;3.09e-10;3!UBERON:0003104;3.27e-10;31!UBERON:0001045;1.14e-08;1!UBERON:0006242;1.32e-08;1 | |ontology_enrichment_development_v019=UBERON:0004161;7.78e-16;11!UBERON:0009497;2.22e-13;13!UBERON:0006241;3.09e-10;3!UBERON:0003057;3.09e-10;3!UBERON:0003104;3.27e-10;31!UBERON:0001045;1.14e-08;1!UBERON:0006242;1.32e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:299;5.54e-07;25 | |ontology_enrichment_disease_v019=DOID:299;5.54e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:299,5.47e-07,25 | |||
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| ||
|short_description=p1@MYO1A | |short_description=p1@MYO1A | ||
}} | }} |
Revision as of 04:07, 17 November 2012
Short description: | p1@MYO1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_MYO1A_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000300119, NM_005379, uc001smw.3, uc009zpd.2_5end |
EntrezGene: | MYO1A |
HGNC: | 7595 |
UniProt: | Q9UBC5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.61e-09 | 12 |
endodermal cell | 2.07e-08 | 58 |
intestinal epithelial cell | 4.38e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.63e-47 | 17 |
gastrointestinal system | 5.40e-45 | 25 |
large intestine | 6.84e-32 | 11 |
lower digestive tract | 2.02e-23 | 5 |
colon | 2.36e-20 | 9 |
subdivision of digestive tract | 3.05e-18 | 118 |
rectum | 6.92e-17 | 4 |
digestive system | 5.66e-16 | 145 |
digestive tract | 5.66e-16 | 145 |
primitive gut | 5.66e-16 | 145 |
small intestine | 3.45e-14 | 4 |
endoderm-derived structure | 3.95e-14 | 160 |
endoderm | 3.95e-14 | 160 |
presumptive endoderm | 3.95e-14 | 160 |
organ system subdivision | 1.42e-12 | 223 |
spinal cord | 3.31e-10 | 3 |
dorsal region element | 3.31e-10 | 3 |
dorsum | 3.31e-10 | 3 |
hindgut | 2.43e-09 | 19 |
vermiform appendix | 1.18e-08 | 1 |
caecum | 1.18e-08 | 1 |
midgut | 1.18e-08 | 1 |
intestinal mucosa | 4.38e-08 | 4 |
wall of intestine | 4.38e-08 | 4 |
gastrointestinal system mucosa | 4.38e-08 | 4 |
gastrointestinal system epithelium | 4.38e-08 | 4 |
intestinal epithelium | 4.38e-08 | 4 |
digestive tract diverticulum | 1.67e-07 | 23 |
gut epithelium | 2.84e-07 | 54 |
epithelium of foregut-midgut junction | 7.12e-07 | 25 |
anatomical boundary | 7.12e-07 | 25 |
hepatobiliary system | 7.12e-07 | 25 |
foregut-midgut junction | 7.12e-07 | 25 |
septum transversum | 7.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 5.47e-07 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.