FFCP PHASE1:Hg19::chr2:45236540..45236577,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000327!1.96e-07!14 | |ontology_enrichment_celltype=CL:0000327!1.96e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000327;5.55e-09;15!CL:0000499;2.08e-07;28!CL:0000153;4.47e-07;9!CL:0000447;4.47e-07;9!CL:0002556;9.71e-07;6!CL:0000188;9.72e-07;9 | |ontology_enrichment_celltype_v019=CL:0000327;5.55e-09;15!CL:0000499;2.08e-07;28!CL:0000153;4.47e-07;9!CL:0000447;4.47e-07;9!CL:0002556;9.71e-07;6!CL:0000188;9.72e-07;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000327,5.16e-09,15;CL:0000499,1.95e-07,28;CL:0000153,4.11e-07,9;CL:0000447,4.11e-07,9;CL:0002556,9.33e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!8.81e-11!72;UBERON:0000078!3.77e-10!18;UBERON:0000165!7.57e-08!28;UBERON:0000930!7.57e-08!28;UBERON:0004119!1.11e-07!169;UBERON:0000925!1.11e-07!169;UBERON:0006595!1.11e-07!169;UBERON:0003104!3.32e-07!238;UBERON:0009142!3.32e-07!238;UBERON:0000065!5.10e-07!53;UBERON:0000481!8.73e-07!347 | |ontology_enrichment_uberon=UBERON:0001004!8.81e-11!72;UBERON:0000078!3.77e-10!18;UBERON:0000165!7.57e-08!28;UBERON:0000930!7.57e-08!28;UBERON:0004119!1.11e-07!169;UBERON:0000925!1.11e-07!169;UBERON:0006595!1.11e-07!169;UBERON:0003104!3.32e-07!238;UBERON:0009142!3.32e-07!238;UBERON:0000065!5.10e-07!53;UBERON:0000481!8.73e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.70e-10;16!UBERON:0002036;2.70e-10;16!UBERON:0001434;2.08e-09;36!UBERON:0000165;1.96e-08;28!UBERON:0004905;7.43e-08;8!UBERON:0000982;7.43e-08;8!UBERON:0004770;7.43e-08;8!UBERON:0000075;9.81e-08;16!UBERON:0002204;2.64e-07;70!UBERON:0001044;4.86e-07;6!UBERON:0003293;4.86e-07;6!UBERON:0003294;4.86e-07;6!UBERON:0010047;4.86e-07;6!UBERON:0003408;4.86e-07;6!UBERON:0000167;4.86e-07;6!UBERON:0000072;5.52e-07;37!UBERON:0001758;9.71e-07;6!UBERON:0003672;9.71e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001134;2.70e-10;16!UBERON:0002036;2.70e-10;16!UBERON:0001434;2.08e-09;36!UBERON:0000165;1.96e-08;28!UBERON:0004905;7.43e-08;8!UBERON:0000982;7.43e-08;8!UBERON:0004770;7.43e-08;8!UBERON:0000075;9.81e-08;16!UBERON:0002204;2.64e-07;70!UBERON:0001044;4.86e-07;6!UBERON:0003293;4.86e-07;6!UBERON:0003294;4.86e-07;6!UBERON:0010047;4.86e-07;6!UBERON:0003408;4.86e-07;6!UBERON:0000167;4.86e-07;6!UBERON:0000072;5.52e-07;37!UBERON:0001758;9.71e-07;6!UBERON:0003672;9.71e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,2.00e-13,74;UBERON:0000165,2.82e-09,29;UBERON:0000930,2.82e-09,29;UBERON:0004119,4.01e-09,160;UBERON:0000925,4.01e-09,160;UBERON:0006595,4.01e-09,160;UBERON:0000065,2.74e-08,54;UBERON:0000072,3.93e-08,47;UBERON:0004905,7.51e-08,8;UBERON:0000982,7.51e-08,8;UBERON:0004770,7.51e-08,8;UBERON:0000075,9.54e-08,16;UBERON:0001007,2.60e-07,145;UBERON:0001555,2.60e-07,145;UBERON:0007026,2.60e-07,145;UBERON:0001044,4.81e-07,6;UBERON:0003293,4.81e-07,6;UBERON:0003294,4.81e-07,6;UBERON:0010047,4.81e-07,6;UBERON:0000167,4.81e-07,6;UBERON:0008947,5.70e-07,38;UBERON:0003258,5.70e-07,38;UBERON:0001758,9.33e-07,6;UBERON:0003672,9.33e-07,6 | |||
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| ||
|short_description=p1@SIX2 | |short_description=p1@SIX2 | ||
}} | }} |
Revision as of 21:40, 17 November 2012
Short description: | p1@SIX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SIX2_5end |
Coexpression cluster: | C1906_Multipotent_small_normal_Fibroblast_smallcell_breast_Pericytes |
Association with transcript: | 0bp_to_ENST00000303077, NM_016932, uc002ruo.2, uc002rup.2_5end |
EntrezGene: | SIX2 |
HGNC: | 10888 |
UniProt: | Q9NPC8Q8TBA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extracellular matrix secreting cell | 5.16e-09 | 15 |
stromal cell | 1.95e-07 | 28 |
GAG secreting cell | 4.11e-07 | 9 |
carbohydrate secreting cell | 4.11e-07 | 9 |
fibroblast of periodontium | 9.33e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 2.00e-13 | 74 |
mouth | 2.82e-09 | 29 |
stomodeum | 2.82e-09 | 29 |
endoderm-derived structure | 4.01e-09 | 160 |
endoderm | 4.01e-09 | 160 |
presumptive endoderm | 4.01e-09 | 160 |
respiratory tract | 2.74e-08 | 54 |
segment of respiratory tract | 3.93e-08 | 47 |
articulation | 7.51e-08 | 8 |
skeletal joint | 7.51e-08 | 8 |
articular system | 7.51e-08 | 8 |
subdivision of skeletal system | 9.54e-08 | 16 |
digestive system | 2.60e-07 | 145 |
digestive tract | 2.60e-07 | 145 |
primitive gut | 2.60e-07 | 145 |
saliva-secreting gland | 4.81e-07 | 6 |
gland of oral region | 4.81e-07 | 6 |
gland of foregut | 4.81e-07 | 6 |
oral gland | 4.81e-07 | 6 |
oral cavity | 4.81e-07 | 6 |
respiratory primordium | 5.70e-07 | 38 |
endoderm of foregut | 5.70e-07 | 38 |
periodontium | 9.33e-07 | 6 |
dentition | 9.33e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.