FFCP PHASE1:Hg19::chr5:90679111..90679143,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000738!5.42e-27!140;CL:0002031!9.93e-22!124;CL:0002087!7.34e-20!119;CL:0000766!1.23e-19!76;CL:0002057!4.75e-18!42;CL:0000860!7.48e-16!45;CL:0002032!8.40e-16!165;CL:0000837!8.40e-16!165;CL:0000037!9.70e-16!172;CL:0000566!9.70e-16!172;CL:0000839!2.39e-15!70;CL:0000557!5.61e-15!71;CL:0002009!7.77e-14!65;CL:0002194!2.44e-13!63;CL:0000576!2.44e-13!63;CL:0000040!2.44e-13!63;CL:0000559!2.44e-13!63;CL:0000988!2.64e-12!182;CL:0000763!1.85e-09!112;CL:0000049!1.85e-09!112;CL:0000791!5.20e-09!18;CL:0000789!5.20e-09!18;CL:0002420!5.20e-09!18;CL:0002419!5.20e-09!18;CL:0000790!5.20e-09!18;CL:0000542!7.57e-07!53;CL:0000051!7.57e-07!53 | |ontology_enrichment_celltype=CL:0000738!5.42e-27!140;CL:0002031!9.93e-22!124;CL:0002087!7.34e-20!119;CL:0000766!1.23e-19!76;CL:0002057!4.75e-18!42;CL:0000860!7.48e-16!45;CL:0002032!8.40e-16!165;CL:0000837!8.40e-16!165;CL:0000037!9.70e-16!172;CL:0000566!9.70e-16!172;CL:0000839!2.39e-15!70;CL:0000557!5.61e-15!71;CL:0002009!7.77e-14!65;CL:0002194!2.44e-13!63;CL:0000576!2.44e-13!63;CL:0000040!2.44e-13!63;CL:0000559!2.44e-13!63;CL:0000988!2.64e-12!182;CL:0000763!1.85e-09!112;CL:0000049!1.85e-09!112;CL:0000791!5.20e-09!18;CL:0000789!5.20e-09!18;CL:0002420!5.20e-09!18;CL:0002419!5.20e-09!18;CL:0000790!5.20e-09!18;CL:0000542!7.57e-07!53;CL:0000051!7.57e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.16e-13;33!CL:0002057;6.16e-13;33!CL:0000576;2.83e-12;48!CL:0000766;1.44e-10;69!CL:0000473;4.21e-10;39!CL:0000234;4.21e-10;39!CL:0000791;5.15e-09;18!CL:0000789;5.15e-09;18!CL:0002419;5.15e-09;18!CL:0002087;1.16e-07;104!CL:0000738;8.96e-07;136 | |ontology_enrichment_celltype_v019=CL:0000860;6.16e-13;33!CL:0002057;6.16e-13;33!CL:0000576;2.83e-12;48!CL:0000766;1.44e-10;69!CL:0000473;4.21e-10;39!CL:0000234;4.21e-10;39!CL:0000791;5.15e-09;18!CL:0000789;5.15e-09;18!CL:0002419;5.15e-09;18!CL:0002087;1.16e-07;104!CL:0000738;8.96e-07;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.96e-28,136;CL:0002031,6.58e-23,120;CL:0000766,2.86e-21,72;CL:0002087,5.37e-21,115;CL:0000860,4.75e-18,42;CL:0002057,4.75e-18,42;CL:0000473,8.79e-17,48;CL:0000234,8.79e-17,48;CL:0000839,8.94e-17,66;CL:0002032,1.55e-16,161;CL:0000837,1.55e-16,161;CL:0000037,1.89e-16,168;CL:0000557,2.33e-16,67;CL:0002009,3.16e-15,61;CL:0002194,1.01e-14,59;CL:0000576,1.01e-14,59;CL:0000040,1.01e-14,59;CL:0000559,1.01e-14,59;CL:0000988,2.55e-13,177;CL:0000763,4.04e-10,108;CL:0000049,4.04e-10,108;CL:0000791,5.20e-09,18;CL:0000789,5.20e-09,18;CL:0002420,5.20e-09,18;CL:0002419,5.20e-09,18;CL:0000790,5.20e-09,18;CL:0000542,7.57e-07,53;CL:0000051,7.57e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-13;42!CL:0000790;5.15e-09;18 | |ontology_enrichment_development_v019=CL:0002057;2.44e-13;42!CL:0000790;5.15e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.10e-17!102;UBERON:0003061!1.10e-17!102;UBERON:0002193!8.59e-17!112;UBERON:0002371!3.80e-13!80;UBERON:0001474!2.14e-11!86;UBERON:0007023!1.23e-10!115;UBERON:0002405!5.05e-09!115;UBERON:0004765!2.29e-08!101;UBERON:0001434!2.29e-08!101 | |ontology_enrichment_uberon=UBERON:0002390!1.10e-17!102;UBERON:0003061!1.10e-17!102;UBERON:0002193!8.59e-17!112;UBERON:0002371!3.80e-13!80;UBERON:0001474!2.14e-11!86;UBERON:0007023!1.23e-10!115;UBERON:0002405!5.05e-09!115;UBERON:0004765!2.29e-08!101;UBERON:0001434!2.29e-08!101 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.36e-19,98;UBERON:0003061,7.36e-19,98;UBERON:0002193,7.76e-18,108;UBERON:0002371,2.87e-14,76;UBERON:0002405,3.04e-14,93;UBERON:0001474,2.45e-12,82;UBERON:0007023,1.41e-10,114;UBERON:0004765,2.85e-10,90;UBERON:0001434,6.57e-09,100 | |||
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| ||
|short_description=p1@ARRDC3 | |short_description=p1@ARRDC3 | ||
}} | }} |
Revision as of 04:25, 19 November 2012
Short description: | p1@ARRDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ARRDC3_5end |
Coexpression cluster: | C4528_Neutrophils_renal_lung_blood_CD4_chorionic_Mast |
Association with transcript: | 5bp_to_NM_020801, uc003kjz.2_5end |
EntrezGene: | ARRDC3 |
HGNC: | 29263 |
UniProt: | Q96B67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 2.96e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 6.58e-23 | 120 |
myeloid leukocyte | 2.86e-21 | 72 |
nongranular leukocyte | 5.37e-21 | 115 |
classical monocyte | 4.75e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.75e-18 | 42 |
defensive cell | 8.79e-17 | 48 |
phagocyte | 8.79e-17 | 48 |
myeloid lineage restricted progenitor cell | 8.94e-17 | 66 |
hematopoietic oligopotent progenitor cell | 1.55e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.55e-16 | 161 |
hematopoietic stem cell | 1.89e-16 | 168 |
granulocyte monocyte progenitor cell | 2.33e-16 | 67 |
macrophage dendritic cell progenitor | 3.16e-15 | 61 |
monopoietic cell | 1.01e-14 | 59 |
monocyte | 1.01e-14 | 59 |
monoblast | 1.01e-14 | 59 |
promonocyte | 1.01e-14 | 59 |
hematopoietic cell | 2.55e-13 | 177 |
myeloid cell | 4.04e-10 | 108 |
common myeloid progenitor | 4.04e-10 | 108 |
mature alpha-beta T cell | 5.20e-09 | 18 |
alpha-beta T cell | 5.20e-09 | 18 |
immature T cell | 5.20e-09 | 18 |
mature T cell | 5.20e-09 | 18 |
immature alpha-beta T cell | 5.20e-09 | 18 |
lymphocyte | 7.57e-07 | 53 |
common lymphoid progenitor | 7.57e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.36e-19 | 98 |
blood island | 7.36e-19 | 98 |
hemolymphoid system | 7.76e-18 | 108 |
bone marrow | 2.87e-14 | 76 |
immune system | 3.04e-14 | 93 |
bone element | 2.45e-12 | 82 |
adult organism | 1.41e-10 | 114 |
skeletal element | 2.85e-10 | 90 |
skeletal system | 6.57e-09 | 100 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.