FFCP PHASE1:Mm9::chr4:140980115..140980116,+: Difference between revisions
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|id=chr4:140980115..140980116,+ | |id=chr4:140980115..140980116,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,2.49e-20,3;CL:0000737,2.49e-20,3;CL:0000746,2.49e-20,3;CL:0000513,2.49e-20,3;CL:0000680,1.07e-10,6;CL:0000187,1.07e-10,6;CL:0000056,1.07e-10,6;CL:0000222,2.61e-09,7;CL:0000355,1.89e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!2.62e-31!18;UBERON:0000948!2.62e-31!18;UBERON:0005498!2.62e-31!18;UBERON:0004140!2.62e-31!18;UBERON:0009881!2.62e-31!18;UBERON:0004141!2.62e-31!18;UBERON:0003084!2.62e-31!18;UBERON:0007005!2.62e-31!18;UBERON:0004139!2.62e-31!18;UBERON:0004291!2.62e-31!18;UBERON:0004535!1.45e-23!23;UBERON:0001009!1.45e-23!23;UBERON:0004872!4.86e-17!33;UBERON:0003103!4.72e-12!43;UBERON:0003914!1.17e-10!47 | |ontology_enrichment_uberon=UBERON:0007100!2.62e-31!18;UBERON:0000948!2.62e-31!18;UBERON:0005498!2.62e-31!18;UBERON:0004140!2.62e-31!18;UBERON:0009881!2.62e-31!18;UBERON:0004141!2.62e-31!18;UBERON:0003084!2.62e-31!18;UBERON:0007005!2.62e-31!18;UBERON:0004139!2.62e-31!18;UBERON:0004291!2.62e-31!18;UBERON:0004535!1.45e-23!23;UBERON:0001009!1.45e-23!23;UBERON:0004872!4.86e-17!33;UBERON:0003103!4.72e-12!43;UBERON:0003914!1.17e-10!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,2.35e-29,18;UBERON:0000948,2.35e-29,18;UBERON:0005498,2.35e-29,18;UBERON:0004140,2.35e-29,18;UBERON:0009881,2.35e-29,18;UBERON:0004141,2.35e-29,18;UBERON:0003084,2.35e-29,18;UBERON:0007005,2.35e-29,18;UBERON:0004139,2.35e-29,18;UBERON:0004291,2.35e-29,18;UBERON:0004535,4.18e-23,23;UBERON:0001009,4.18e-23,23;UBERON:0004872,2.90e-16,33;UBERON:0003103,1.38e-12,43;UBERON:0003914,1.50e-11,47;UBERON:0001134,1.89e-07,9;UBERON:0002036,1.89e-07,9;UBERON:0002385,1.89e-07,9;UBERON:0000486,1.89e-07,9;UBERON:0007503,1.89e-07,9;UBERON:0001015,1.89e-07,9;UBERON:0002329,1.89e-07,9;UBERON:0003082,1.89e-07,9;UBERON:0003059,1.89e-07,9;UBERON:0007282,1.89e-07,9;UBERON:0004290,1.89e-07,9;UBERON:0009618,1.89e-07,9;UBERON:0000383,8.53e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,1.14613375975503,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0,0.393528463494808,0.462801338662135,2.55787339225449,1.87791380979733,1.05088808130453,1.31647879930784,0.985004784474571,0.486412857275134,0.730999937126662,0.878200461164203,0.805238512562231,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,1.14613375975503,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621377317606506,0.469052119962192,0.720248245844059,0,0.393528463494808,0.462801338662135,2.55787339225449,1.87791380979733,1.05088808130453,1.31647879930784,0.985004784474571,0.486412857275134,0.730999937126662,0.878200461164203,0.805238512562231,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0.231768651889711,0,0,0,0,0,0,0,0,0.0846146078916765,0.182927972872773,0.263069711437843,0,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0,0,0,0,0.382576664137687,0.220591419119515,0 | ||
|short_description=p@chr4:140980115..140980116,+ | |short_description=p@chr4:140980115..140980116,+ | ||
}} | }} |
Revision as of 02:10, 14 November 2012
Short description: | p@chr4:140980115..140980116, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:140980115..140980116, + |
Coexpression cluster: | MCL_coexpression_mm9:1199 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 2.49e-20 | 3 |
striated muscle cell | 2.49e-20 | 3 |
cardiac muscle cell | 2.49e-20 | 3 |
cardiac muscle myoblast | 2.49e-20 | 3 |
muscle precursor cell | 1.07e-10 | 6 |
muscle cell | 1.07e-10 | 6 |
myoblast | 1.07e-10 | 6 |
mesodermal cell | 2.61e-09 | 7 |
multi-potent skeletal muscle stem cell | 1.89e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 2.35e-29 | 18 |
heart | 2.35e-29 | 18 |
primitive heart tube | 2.35e-29 | 18 |
primary heart field | 2.35e-29 | 18 |
anterior lateral plate mesoderm | 2.35e-29 | 18 |
heart tube | 2.35e-29 | 18 |
heart primordium | 2.35e-29 | 18 |
cardiac mesoderm | 2.35e-29 | 18 |
cardiogenic plate | 2.35e-29 | 18 |
heart rudiment | 2.35e-29 | 18 |
cardiovascular system | 4.18e-23 | 23 |
circulatory system | 4.18e-23 | 23 |
splanchnic layer of lateral plate mesoderm | 2.90e-16 | 33 |
compound organ | 1.38e-12 | 43 |
epithelial tube | 1.50e-11 | 47 |
skeletal muscle tissue | 1.89e-07 | 9 |
striated muscle tissue | 1.89e-07 | 9 |
muscle tissue | 1.89e-07 | 9 |
multilaminar epithelium | 1.89e-07 | 9 |
epithelial vesicle | 1.89e-07 | 9 |
musculature | 1.89e-07 | 9 |
somite | 1.89e-07 | 9 |
myotome | 1.89e-07 | 9 |
presomitic mesoderm | 1.89e-07 | 9 |
presumptive segmental plate | 1.89e-07 | 9 |
dermomyotome | 1.89e-07 | 9 |
trunk paraxial mesoderm | 1.89e-07 | 9 |
musculature of body | 8.53e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.