FFCP PHASE1:Mm9::chr5:72559357..72559377,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=27784|HGNC=|MCL_coexpression_id=122|UniProt=|association_with_transcript=44bp_to_uc008xrf.1_5end|description=CAGE_peak_2_at_Commd8_5end|id=chr5:72559357..72559377,-|ontology_enrichment_celltype=CL:0000988!2.16e-07!32;CL:0002032!2.16e-07!32;CL:0000037!2.16e-07!32;CL:0000566!2.16e-07!32;CL:0000837!2.16e-07!32;CL:0000838!7.53e-07!12|ontology_enrichment_celltype_v019_2=CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32;CL:0000838,7.53e-07,12|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.41e-14!48;UBERON:0002405!3.54e-14!70;UBERON:0002390!3.99e-13!45;UBERON:0003061!3.99e-13!45;UBERON:0000926!7.73e-13!193;UBERON:0004120!7.73e-13!193;UBERON:0006603!7.73e-13!193;UBERON:0003081!2.18e-11!88;UBERON:0004177!4.24e-11!29;UBERON:0001041!4.99e-11!92;UBERON:0000077!1.62e-10!97;UBERON:0005057!3.61e-10!51;UBERON:0001004!3.64e-10!42;UBERON:0000065!8.95e-10!41;UBERON:0003104!1.63e-09!131;UBERON:0009142!1.63e-09!131;UBERON:0003408!4.44e-09!24;UBERON:0004119!7.37e-09!130;UBERON:0000925!7.37e-09!130;UBERON:0006595!7.37e-09!130;UBERON:0002370!1.12e-08!23;UBERON:0000974!1.12e-08!23;UBERON:0004807!1.12e-08!23;UBERON:0005058!1.12e-08!23;UBERON:0003351!1.12e-08!23;UBERON:0009113!1.12e-08!23;UBERON:0003295!1.12e-08!23;UBERON:0009722!1.12e-08!23;UBERON:0005562!1.12e-08!23;UBERON:0007690!1.12e-08!23;UBERON:0001007!1.35e-08!128;UBERON:0001555!1.35e-08!128;UBERON:0007026!1.35e-08!128;UBERON:0004921!5.34e-08!126;UBERON:0004185!5.34e-08!126;UBERON:0006562!7.28e-08!24;UBERON:0001557!7.28e-08!24;UBERON:0001042!7.28e-08!24;UBERON:0008814!7.28e-08!24;UBERON:0009145!7.28e-08!24;UBERON:0005911!9.50e-08!69|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.41e-14,48;UBERON:0002405,1.41e-14,48;UBERON:0001041,3.75e-13,80;UBERON:0002390,3.99e-13,45;UBERON:0003061,3.99e-13,45;UBERON:0004177,4.24e-11,29;UBERON:0005057,4.24e-11,29;UBERON:0003081,7.16e-11,87;UBERON:0001004,3.64e-10,42;UBERON:0004119,4.12e-10,118;UBERON:0000925,4.12e-10,118;UBERON:0006595,4.12e-10,118;UBERON:0000077,5.93e-10,35;UBERON:0001007,7.71e-10,116;UBERON:0001555,7.71e-10,116;UBERON:0007026,7.71e-10,116;UBERON:0000065,8.95e-10,41;UBERON:0004921,3.41e-09,114;UBERON:0003408,4.44e-09,24;UBERON:0002370,1.12e-08,23;UBERON:0000974,1.12e-08,23;UBERON:0004807,1.12e-08,23;UBERON:0005058,1.12e-08,23;UBERON:0003351,1.12e-08,23;UBERON:0009113,1.12e-08,23;UBERON:0003295,1.12e-08,23;UBERON:0009722,1.12e-08,23;UBERON:0005562,1.12e-08,23;UBERON:0007690,1.12e-08,23;UBERON:0000926,1.73e-08,120;UBERON:0004120,1.73e-08,120;UBERON:0006603,1.73e-08,120;UBERON:0006562,7.28e-08,24;UBERON:0001557,7.28e-08,24;UBERON:0001042,7.28e-08,24;UBERON:0008814,7.28e-08,24;UBERON:0009145,7.28e-08,24;UBERON:0005911,9.38e-08,69;UBERON:0001048,3.14e-07,134|phase1_expression=8.16759120234449,4.88565570695105,4.54999239389536,6.35174843744343,4.50806156951712,2.01455126294268,3.27057696833736,25.4372947179905,16.3314917695933,19.8954847373694,6.33506482434368,4.54701306273417,55.6402372276419,61.2817020957172,10.9926221399169,13.5658429151183,10.4934281719222,24.4483178152634,25.2290557834559,20.3707032863054,2.72138528483423,22.0425911665965,23.5079810225042,11.1994695955385,10.3234176480227,6.89078356938024,3.87685796543167,4.30942465371778,11.7814520062952,4.03248207615889,5.09980174507201,0.635030673459631,1.23012957516914,0,2.59966457776147,3.98963148860382,2.6542016314108,15.4856703372656,14.0640362014284,13.6116173433188,12.3528612486513,12.294818729252,14.0798002379035,6.6725313527056,7.40051597902456,5.32285581268876,3.12956537739216,1.74420125104357,1.97717564461025,2.13872888981712,1.67983705950435,1.43752564364972,24.9996083026027,56.5782470768849,45.3726628842326,5.40244815675489,5.73066879877513,12.3761302146586,1.01158230429799,0.528990979272033,0.633831403506179,1.35537812827653,0.889294796111139,5.84934816232909,4.94433181283487,4.2628806896766,2.99600110518405,2.30530983192933,2.38486108309499,1.4850653216486,1.47227472945967,1.14260393761521,1.54607978666129,1.5923803897944,1.62937300731002,2.75765635983006,5.50579404996943,3.70293280447044,3.84016333140609,1.05509030184155,1.37231465403614,2.08365348222704,3.35019598801657,3.93933827022176,5.34793867218835,1.47314292736834,2.70506193518296,2.23679334990361,3.10477392666055,3.77857800533928,11.0148505706638,6.0229671388697,0,3.77792234146472,2.59910566979068,1.79210754838934,7.5839986871146,3.57903677413921,2.59786004602869,2.47337702157238,4.64783285263046,1.28326477414318,5.09610479413291,7.11066703153331,4.11332977921307,3.29367825117628,4.54972000513305,6.73684890342454,29.2599808521304,3.85949561568544,3.99016251562112,3.95805121805784,5.07354093963329,4.22023393547343,4.58595957829249,6.1576629751541,9.39340877390621,3.7595832799177,9.73071607144862,5.50007289821191,6.18356251689102,11.6370060752453,0,1.46390398505774,1.67557365450764,4.85368404896324,9.4653948359677,10.7982491578813,9.53026703047985,2.99581278809645,6.40500843946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| ||
|EntrezGene=27784 | |||
|HGNC= | |||
|MCL_coexpression_id=122 | |||
|UniProt= | |||
|association_with_transcript=44bp_to_uc008xrf.1_5end | |||
|description=CAGE_peak_2_at_Commd8_5end | |||
|id=chr5:72559357..72559377,- | |||
|ontology_enrichment_celltype=CL:0000988!2.16e-07!32;CL:0002032!2.16e-07!32;CL:0000037!2.16e-07!32;CL:0000566!2.16e-07!32;CL:0000837!2.16e-07!32;CL:0000838!7.53e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.16e-07,32;CL:0002032,2.16e-07,32;CL:0000037,2.16e-07,32;CL:0000837,2.16e-07,32;CL:0000838,7.53e-07,12 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.41e-14!48;UBERON:0002405!3.54e-14!70;UBERON:0002390!3.99e-13!45;UBERON:0003061!3.99e-13!45;UBERON:0000926!7.73e-13!193;UBERON:0004120!7.73e-13!193;UBERON:0006603!7.73e-13!193;UBERON:0003081!2.18e-11!88;UBERON:0004177!4.24e-11!29;UBERON:0001041!4.99e-11!92;UBERON:0000077!1.62e-10!97;UBERON:0005057!3.61e-10!51;UBERON:0001004!3.64e-10!42;UBERON:0000065!8.95e-10!41;UBERON:0003104!1.63e-09!131;UBERON:0009142!1.63e-09!131;UBERON:0003408!4.44e-09!24;UBERON:0004119!7.37e-09!130;UBERON:0000925!7.37e-09!130;UBERON:0006595!7.37e-09!130;UBERON:0002370!1.12e-08!23;UBERON:0000974!1.12e-08!23;UBERON:0004807!1.12e-08!23;UBERON:0005058!1.12e-08!23;UBERON:0003351!1.12e-08!23;UBERON:0009113!1.12e-08!23;UBERON:0003295!1.12e-08!23;UBERON:0009722!1.12e-08!23;UBERON:0005562!1.12e-08!23;UBERON:0007690!1.12e-08!23;UBERON:0001007!1.35e-08!128;UBERON:0001555!1.35e-08!128;UBERON:0007026!1.35e-08!128;UBERON:0004921!5.34e-08!126;UBERON:0004185!5.34e-08!126;UBERON:0006562!7.28e-08!24;UBERON:0001557!7.28e-08!24;UBERON:0001042!7.28e-08!24;UBERON:0008814!7.28e-08!24;UBERON:0009145!7.28e-08!24;UBERON:0005911!9.50e-08!69 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.41e-14,48;UBERON:0002405,1.41e-14,48;UBERON:0001041,3.75e-13,80;UBERON:0002390,3.99e-13,45;UBERON:0003061,3.99e-13,45;UBERON:0004177,4.24e-11,29;UBERON:0005057,4.24e-11,29;UBERON:0003081,7.16e-11,87;UBERON:0001004,3.64e-10,42;UBERON:0004119,4.12e-10,118;UBERON:0000925,4.12e-10,118;UBERON:0006595,4.12e-10,118;UBERON:0000077,5.93e-10,35;UBERON:0001007,7.71e-10,116;UBERON:0001555,7.71e-10,116;UBERON:0007026,7.71e-10,116;UBERON:0000065,8.95e-10,41;UBERON:0004921,3.41e-09,114;UBERON:0003408,4.44e-09,24;UBERON:0002370,1.12e-08,23;UBERON:0000974,1.12e-08,23;UBERON:0004807,1.12e-08,23;UBERON:0005058,1.12e-08,23;UBERON:0003351,1.12e-08,23;UBERON:0009113,1.12e-08,23;UBERON:0003295,1.12e-08,23;UBERON:0009722,1.12e-08,23;UBERON:0005562,1.12e-08,23;UBERON:0007690,1.12e-08,23;UBERON:0000926,1.73e-08,120;UBERON:0004120,1.73e-08,120;UBERON:0006603,1.73e-08,120;UBERON:0006562,7.28e-08,24;UBERON:0001557,7.28e-08,24;UBERON:0001042,7.28e-08,24;UBERON:0008814,7.28e-08,24;UBERON:0009145,7.28e-08,24;UBERON:0005911,9.38e-08,69;UBERON:0001048,3.14e-07,134 | |||
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| |||
|short_description=p2@Commd8 | |||
}} |
Revision as of 07:57, 14 September 2013
Short description: | p2@Commd8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Commd8_5end |
Coexpression cluster: | MCL_coexpression_mm9:122 |
Association with transcript: | 44bp_to_uc008xrf.1_5end |
EntrezGene: | Commd8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.16e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.16e-07 | 32 |
hematopoietic stem cell | 2.16e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.16e-07 | 32 |
lymphoid lineage restricted progenitor cell | 7.53e-07 | 12 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.