FFCP PHASE1:Mm9::chr18:34051128..34051166,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:34051128..34051166,-|id=chr18:34051128..34051166,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000068,1.50e-13,3;CL:0002202,1.50e-13,3;CL:0000069,1.50e-13,3;CL:0002632,1.50e-13,3;CL:0002368,1.50e-13,3;CL:0000307,1.50e-13,3;CL:0000377,1.50e-13,3;CL:0002605,7.47e-09,2;CL:0002604,7.47e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.29e-13!17;UBERON:0005181!2.29e-13!17;UBERON:0002224!2.29e-13!17;UBERON:0000915!2.29e-13!17;UBERON:0008947!2.29e-13!17;UBERON:0003258!2.29e-13!17;UBERON:0002048!1.64e-09!14;UBERON:0000117!1.64e-09!14;UBERON:0000171!1.64e-09!14;UBERON:0000170!1.64e-09!14;UBERON:0005597!1.64e-09!14;UBERON:0000118!1.64e-09!14;UBERON:0005153!2.34e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.48e-28,17;UBERON:0005181,3.48e-28,17;UBERON:0002224,3.48e-28,17;UBERON:0000915,3.48e-28,17;UBERON:0008947,3.48e-28,17;UBERON:0003258,3.48e-28,17;UBERON:0002048,4.56e-18,14;UBERON:0000117,4.56e-18,14;UBERON:0000171,4.56e-18,14;UBERON:0000170,4.56e-18,14;UBERON:0005597,4.56e-18,14;UBERON:0000118,4.56e-18,14;UBERON:0005153,1.09e-14,17;UBERON:0003126,1.50e-13,3;UBERON:0001005,1.50e-13,3;UBERON:0007196,1.50e-13,3;UBERON:0001558,1.50e-13,3;UBERON:0005157,2.53e-12,20;UBERON:0000065,1.32e-10,41;UBERON:0001004,2.61e-10,42|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,3.07560655828261,3.4997381833371,0.699932108126813,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.45839474333043,0,0,0,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0,8.35108580632483,3.89679006904303,3.5333957451034,0,0,0,0,9.52560580449342,9.88103475352884,8.08839112023653,1.1418387971906,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2582807346612,0,0.162964976442026,0,0,0,0.952174563544055,3.12213836572478,4.88668946729192,5.3151525515706,2.87018583583477,9.99566219766002,3.62638461918381,9.54683786637976,0,0,0,0,0,0,23.1148272981112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.704015124191131,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0|short_description=p@chr18:34051128..34051166,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:34051128..34051166,- | |||
|id=chr18:34051128..34051166,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.50e-13,3;CL:0002202,1.50e-13,3;CL:0000069,1.50e-13,3;CL:0002632,1.50e-13,3;CL:0002368,1.50e-13,3;CL:0000307,1.50e-13,3;CL:0000377,1.50e-13,3;CL:0002605,7.47e-09,2;CL:0002604,7.47e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.29e-13!17;UBERON:0005181!2.29e-13!17;UBERON:0002224!2.29e-13!17;UBERON:0000915!2.29e-13!17;UBERON:0008947!2.29e-13!17;UBERON:0003258!2.29e-13!17;UBERON:0002048!1.64e-09!14;UBERON:0000117!1.64e-09!14;UBERON:0000171!1.64e-09!14;UBERON:0000170!1.64e-09!14;UBERON:0005597!1.64e-09!14;UBERON:0000118!1.64e-09!14;UBERON:0005153!2.34e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,3.48e-28,17;UBERON:0005181,3.48e-28,17;UBERON:0002224,3.48e-28,17;UBERON:0000915,3.48e-28,17;UBERON:0008947,3.48e-28,17;UBERON:0003258,3.48e-28,17;UBERON:0002048,4.56e-18,14;UBERON:0000117,4.56e-18,14;UBERON:0000171,4.56e-18,14;UBERON:0000170,4.56e-18,14;UBERON:0005597,4.56e-18,14;UBERON:0000118,4.56e-18,14;UBERON:0005153,1.09e-14,17;UBERON:0003126,1.50e-13,3;UBERON:0001005,1.50e-13,3;UBERON:0007196,1.50e-13,3;UBERON:0001558,1.50e-13,3;UBERON:0005157,2.53e-12,20;UBERON:0000065,1.32e-10,41;UBERON:0001004,2.61e-10,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89147186513637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,3.07560655828261,3.4997381833371,0.699932108126813,0,0,0,0,0,0.286533439938757,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.255374676170375,0,0.131886287730194,0,0,0.279182999001381,1.12552522006336,0.45839474333043,0,0,0,0.681535739998656,0.453429360640713,0,0,0,0,0,0,0,8.35108580632483,3.89679006904303,3.5333957451034,0,0,0,0,9.52560580449342,9.88103475352884,8.08839112023653,1.1418387971906,0,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.2582807346612,0,0.162964976442026,0,0,0,0.952174563544055,3.12213836572478,4.88668946729192,5.3151525515706,2.87018583583477,9.99566219766002,3.62638461918381,9.54683786637976,0,0,0,0,0,0,23.1148272981112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0.704015124191131,0.21183207086382,0,0.16488625294148,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0.179427713218951,0.167884616364078,0,0.187682475451182,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0.320919209591815,0,0.50695859978048,0,0,0.128050304809739,0.0574354689556133,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0.145346416632329,0.188218760830661,0.0846146078916765,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr18:34051128..34051166,- | |||
}} |
Revision as of 15:56, 13 September 2013
Short description: | p@chr18:34051128..34051166, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:34051128..34051166, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.50e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.50e-13 | 3 |
branched duct epithelial cell | 1.50e-13 | 3 |
epithelial cell of lower respiratory tract | 1.50e-13 | 3 |
respiratory epithelial cell | 1.50e-13 | 3 |
tracheal epithelial cell | 1.50e-13 | 3 |
tracheoblast | 1.50e-13 | 3 |
astrocyte of the cerebral cortex | 7.47e-09 | 2 |
astrocyte of the hippocampus | 7.47e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 3.48e-28 | 17 |
thoracic segment organ | 3.48e-28 | 17 |
thoracic cavity | 3.48e-28 | 17 |
thoracic segment of trunk | 3.48e-28 | 17 |
respiratory primordium | 3.48e-28 | 17 |
endoderm of foregut | 3.48e-28 | 17 |
lung | 4.56e-18 | 14 |
respiratory tube | 4.56e-18 | 14 |
respiration organ | 4.56e-18 | 14 |
pair of lungs | 4.56e-18 | 14 |
lung primordium | 4.56e-18 | 14 |
lung bud | 4.56e-18 | 14 |
epithelial bud | 1.09e-14 | 17 |
trachea | 1.50e-13 | 3 |
respiratory airway | 1.50e-13 | 3 |
tracheobronchial tree | 1.50e-13 | 3 |
lower respiratory tract | 1.50e-13 | 3 |
epithelial fold | 2.53e-12 | 20 |
respiratory tract | 1.32e-10 | 41 |
respiratory system | 2.61e-10 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.