FFCP PHASE1:Mm9::chr2:152365839..152365850,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=75400|HGNC=|MCL_coexpression_id=9|UniProt=Q8BGW9|association_with_transcript=-5bp_to_ENSMUST00000060598_5end|description=CAGE_peak_3_at_Defb29_5end|id=chr2:152365839..152365850,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!6.27e-37!14;UBERON:0003918!6.27e-37!14;UBERON:0005095!6.27e-37!14;UBERON:0007687!6.27e-37!14;UBERON:0006554!3.65e-32!16;UBERON:0001008!3.35e-30!17;UBERON:0000489!3.26e-24!21;UBERON:0001301!5.76e-17!3;UBERON:0006555!5.76e-17!3;UBERON:0005103!5.76e-17!3;UBERON:0000083!5.76e-17!3;UBERON:0009201!5.76e-17!3;UBERON:0004819!5.76e-17!3;UBERON:0006553!5.76e-17!3;UBERON:0003074!5.76e-17!3;UBERON:0003060!5.76e-17!3;UBERON:0000080!7.23e-13!4;UBERON:0005904!7.23e-13!4;UBERON:0006947!7.23e-13!4;UBERON:0002120!7.23e-13!4;UBERON:0004054!7.23e-13!4;UBERON:0004875!7.23e-13!4;UBERON:0004876!7.23e-13!4;UBERON:0005721!7.23e-13!4;UBERON:0005754!7.23e-13!4;UBERON:0007297!7.23e-13!4;UBERON:0003135!3.22e-12!15;UBERON:0001343!1.16e-11!2;UBERON:0004910!1.16e-11!2;UBERON:0004909!1.16e-11!2;UBERON:0005154!1.16e-11!2;UBERON:0005295!1.16e-11!2;UBERON:0005297!1.16e-11!2;UBERON:0005294!1.16e-11!2;UBERON:0010141!1.16e-11!2;UBERON:0005891!1.16e-11!2;UBERON:0003101!1.97e-11!16;UBERON:0000079!1.97e-11!16;UBERON:0003103!3.80e-11!43;UBERON:0005172!1.30e-09!49;UBERON:0005173!1.30e-09!49;UBERON:0002417!1.30e-09!49;UBERON:0000916!1.30e-09!49;UBERON:0000473!3.84e-09!14;UBERON:0000058!9.55e-09!6;UBERON:0004871!4.62e-08!3;UBERON:0004176!1.67e-07!17;UBERON:0009196!1.67e-07!17;UBERON:0009117!1.67e-07!17;UBERON:0003133!1.76e-07!24;UBERON:0000991!4.44e-07!18;UBERON:0005564!4.44e-07!18;UBERON:0005156!7.19e-07!26;UBERON:0000990!7.19e-07!26;UBERON:0009569!9.03e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.36e-19,14;UBERON:0003918,1.36e-19,14;UBERON:0011143,1.36e-19,14;UBERON:0005095,1.36e-19,14;UBERON:0007687,1.36e-19,14;UBERON:0006554,1.68e-15,18;UBERON:0001008,9.58e-15,19;UBERON:0000489,1.90e-13,21;UBERON:0001301,4.56e-11,3;UBERON:0006555,4.56e-11,3;UBERON:0005103,4.56e-11,3;UBERON:0000083,4.56e-11,3;UBERON:0009201,4.56e-11,3;UBERON:0004819,4.56e-11,3;UBERON:0006553,4.56e-11,3;UBERON:0003074,4.56e-11,3;UBERON:0003060,4.56e-11,3;UBERON:0000080,1.23e-08,4;UBERON:0005904,1.23e-08,4;UBERON:0006947,1.23e-08,4;UBERON:0002120,1.23e-08,4;UBERON:0004054,1.23e-08,4;UBERON:0004875,1.23e-08,4;UBERON:0004876,1.23e-08,4;UBERON:0005721,1.23e-08,4;UBERON:0005754,1.23e-08,4;UBERON:0007297,1.23e-08,4;UBERON:0003103,4.30e-07,43|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.373220911830279,22.492325500597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.758838445491087,1.18088118383682,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Defb29}} | ||
|EntrezGene=75400 | |||
|HGNC= | |||
|MCL_coexpression_id=9 | |||
|UniProt=Q8BGW9 | |||
|association_with_transcript=-5bp_to_ENSMUST00000060598_5end | |||
|description=CAGE_peak_3_at_Defb29_5end | |||
|id=chr2:152365839..152365850,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!6.27e-37!14;UBERON:0003918!6.27e-37!14;UBERON:0005095!6.27e-37!14;UBERON:0007687!6.27e-37!14;UBERON:0006554!3.65e-32!16;UBERON:0001008!3.35e-30!17;UBERON:0000489!3.26e-24!21;UBERON:0001301!5.76e-17!3;UBERON:0006555!5.76e-17!3;UBERON:0005103!5.76e-17!3;UBERON:0000083!5.76e-17!3;UBERON:0009201!5.76e-17!3;UBERON:0004819!5.76e-17!3;UBERON:0006553!5.76e-17!3;UBERON:0003074!5.76e-17!3;UBERON:0003060!5.76e-17!3;UBERON:0000080!7.23e-13!4;UBERON:0005904!7.23e-13!4;UBERON:0006947!7.23e-13!4;UBERON:0002120!7.23e-13!4;UBERON:0004054!7.23e-13!4;UBERON:0004875!7.23e-13!4;UBERON:0004876!7.23e-13!4;UBERON:0005721!7.23e-13!4;UBERON:0005754!7.23e-13!4;UBERON:0007297!7.23e-13!4;UBERON:0003135!3.22e-12!15;UBERON:0001343!1.16e-11!2;UBERON:0004910!1.16e-11!2;UBERON:0004909!1.16e-11!2;UBERON:0005154!1.16e-11!2;UBERON:0005295!1.16e-11!2;UBERON:0005297!1.16e-11!2;UBERON:0005294!1.16e-11!2;UBERON:0010141!1.16e-11!2;UBERON:0005891!1.16e-11!2;UBERON:0003101!1.97e-11!16;UBERON:0000079!1.97e-11!16;UBERON:0003103!3.80e-11!43;UBERON:0005172!1.30e-09!49;UBERON:0005173!1.30e-09!49;UBERON:0002417!1.30e-09!49;UBERON:0000916!1.30e-09!49;UBERON:0000473!3.84e-09!14;UBERON:0000058!9.55e-09!6;UBERON:0004871!4.62e-08!3;UBERON:0004176!1.67e-07!17;UBERON:0009196!1.67e-07!17;UBERON:0009117!1.67e-07!17;UBERON:0003133!1.76e-07!24;UBERON:0000991!4.44e-07!18;UBERON:0005564!4.44e-07!18;UBERON:0005156!7.19e-07!26;UBERON:0000990!7.19e-07!26;UBERON:0009569!9.03e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.36e-19,14;UBERON:0003918,1.36e-19,14;UBERON:0011143,1.36e-19,14;UBERON:0005095,1.36e-19,14;UBERON:0007687,1.36e-19,14;UBERON:0006554,1.68e-15,18;UBERON:0001008,9.58e-15,19;UBERON:0000489,1.90e-13,21;UBERON:0001301,4.56e-11,3;UBERON:0006555,4.56e-11,3;UBERON:0005103,4.56e-11,3;UBERON:0000083,4.56e-11,3;UBERON:0009201,4.56e-11,3;UBERON:0004819,4.56e-11,3;UBERON:0006553,4.56e-11,3;UBERON:0003074,4.56e-11,3;UBERON:0003060,4.56e-11,3;UBERON:0000080,1.23e-08,4;UBERON:0005904,1.23e-08,4;UBERON:0006947,1.23e-08,4;UBERON:0002120,1.23e-08,4;UBERON:0004054,1.23e-08,4;UBERON:0004875,1.23e-08,4;UBERON:0004876,1.23e-08,4;UBERON:0005721,1.23e-08,4;UBERON:0005754,1.23e-08,4;UBERON:0007297,1.23e-08,4;UBERON:0003103,4.30e-07,43 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81471491080253,0.373220911830279,22.492325500597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407302655690628,0.193952487167626,0.350679099451593,0.758838445491087,1.18088118383682,1.41298855057237,0.616985819609003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Defb29 | |||
}} |
Revision as of 22:26, 13 September 2013
Short description: | p3@Defb29 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Defb29_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | -5bp_to_ENSMUST00000060598_5end |
EntrezGene: | Defb29 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 1.36e-19 | 14 |
kidney mesenchyme | 1.36e-19 | 14 |
upper urinary tract | 1.36e-19 | 14 |
kidney rudiment | 1.36e-19 | 14 |
kidney field | 1.36e-19 | 14 |
urinary system structure | 1.68e-15 | 18 |
renal system | 9.58e-15 | 19 |
cavitated compound organ | 1.90e-13 | 21 |
epididymis | 4.56e-11 | 3 |
excretory tube | 4.56e-11 | 3 |
mesonephric epithelium | 4.56e-11 | 3 |
mesonephric tubule | 4.56e-11 | 3 |
nephric duct | 4.56e-11 | 3 |
kidney epithelium | 4.56e-11 | 3 |
renal duct | 4.56e-11 | 3 |
mesonephric duct | 4.56e-11 | 3 |
pronephric duct | 4.56e-11 | 3 |
mesonephros | 1.23e-08 | 4 |
duct of male reproductive system | 1.23e-08 | 4 |
male genital duct | 1.23e-08 | 4 |
pronephros | 1.23e-08 | 4 |
internal male genitalia | 1.23e-08 | 4 |
nephrogenic cord | 1.23e-08 | 4 |
urogenital ridge | 1.23e-08 | 4 |
pronephric mesoderm | 1.23e-08 | 4 |
rostral part of nephrogenic cord | 1.23e-08 | 4 |
presumptive pronephric mesoderm | 1.23e-08 | 4 |
compound organ | 4.30e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.