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FFCP PHASE1:Mm9::chr11:78312748..78312774,+: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=22370|HGNC=|MCL_coexpression_id=8|UniProt=|association_with_transcript=74bp_to_ENSMUST00000146997_5end|description=CAGE_peak_1_at_Vtn_5end|id=chr11:78312748..78312774,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!7.89e-15!22;UBERON:0007499!7.89e-15!22;UBERON:0006925!7.89e-15!22;UBERON:0009497!7.89e-15!22;UBERON:0000015!7.89e-15!22;UBERON:0002423!7.89e-15!22;UBERON:0006235!7.89e-15!22;UBERON:0008835!7.89e-15!22;UBERON:0003894!7.89e-15!22;UBERON:0004161!7.89e-15!22;UBERON:0008836!7.89e-15!22;UBERON:0009854!3.21e-14!23;UBERON:0009856!3.21e-14!23;UBERON:0002365!2.14e-13!25;UBERON:0002330!2.14e-13!25;UBERON:0000025!6.83e-11!114;UBERON:0004111!6.90e-10!122;UBERON:0000468!3.73e-08!333;UBERON:0001049!3.78e-08!52;UBERON:0005068!3.78e-08!52;UBERON:0006241!3.78e-08!52;UBERON:0007135!3.78e-08!52;UBERON:0000949!5.03e-08!72;UBERON:0000955!5.67e-08!50;UBERON:0006238!5.67e-08!50;UBERON:0005177!6.52e-08!85;UBERON:0002616!1.28e-07!49;UBERON:0000479!2.67e-07!349;UBERON:0002346!7.76e-07!71;UBERON:0003075!7.76e-07!71;UBERON:0007284!7.76e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.72e-15,22;UBERON:0007499,5.72e-15,22;UBERON:0006925,5.72e-15,22;UBERON:0009497,5.72e-15,22;UBERON:0000015,5.72e-15,22;UBERON:0002423,5.72e-15,22;UBERON:0006235,5.72e-15,22;UBERON:0008835,5.72e-15,22;UBERON:0003894,5.72e-15,22;UBERON:0004161,5.72e-15,22;UBERON:0008836,5.72e-15,22;UBERON:0009854,2.36e-14,23;UBERON:0009856,2.36e-14,23;UBERON:0002365,1.61e-13,25;UBERON:0002330,1.61e-13,25;UBERON:0000025,8.97e-11,114;UBERON:0004111,1.12e-09,122;UBERON:0000073,6.84e-09,54;UBERON:0001049,2.95e-08,52;UBERON:0005068,2.95e-08,52;UBERON:0006241,2.95e-08,52;UBERON:0007135,2.95e-08,52;UBERON:0000949,4.88e-08,72;UBERON:0000955,3.39e-07,47;UBERON:0006238,3.39e-07,47;UBERON:0002616,7.51e-07,46|phase1_expression=17.6163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,21.7710822786739,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,0,6.81027166476863,5.8328969722285,2.2397827460058,5.75010257459886,0,0,0,0,0,0.515672092277442,19.8270131642406,21.6886301501533,36.7622214033584,2.71075625655306,7.11435836888911,0,0,0,32.9560121570245,27.2794996778304,21.7748185847803,29.2962886179769,27.552569937031,59.1297537715873,84.3717826435164,9.18680994112155,11.8848384062613,10.1114066527102,110.115880999389,104.703617229854,87.2485108895463,15.6944682398931,27.4462930807229,28.129322010065,146.571074475725,153.634192538649,172.356423492242,68.3538318298909,60.0808492972214,64.6806077013793,0.530083353332288,0.453429360640713,57.3931687629322,3532.04001500859,3363.81818785224,5201.65936100528,4668.6435593615,3564.9499406335,691.267435888483,0,0,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0,0,0,1352.39387139255,17.3488382043605,14.398887489288,17.3485326766136,47.1921491383819,91.5543524106552,55.4659317233651,52.3269746753886,24.2536521266274,43.7535092889842,7.22996784599558,0.884610551949874,9.54424414689714,11.9254419968613,6.30337829075789,5.59175283654366,68.8034872977136,80.0086420027398,10.9846533739694,0,0,0,95.2668466614672,49.4100651044117,19.6020789296068,93.5174842634447,64.6960107045736,85.6086743585388,74.955463537304,3.36069900706044,6.59356944233493,2.0217820674694,14.5204880561667,1.56144531555244,1.60931473103431,2.88099407688559,40.8410056334788,1.63287597963187,5.50888997224854,5.15359485078509,21.4723797713383,0,0.189106080167819,0,0.657587197282725,0.278047249225598,2.089512999133,3.08673204611915,0.995171334092466,0,0,0,2.27838349789052,9.38104239924385,0,0,1.57411385397923,0.617068451549513,1.62773761325285,1.87791380979733,1.28441876603886,3.62031669809657,32.833492815819,46.4524278697753,44.5909961647264,46.5446244417027,51.8036776415035,89.16293819119,45.4838386716437,8.59088835757875,0.264450566663544,4.69234151177515,6.50262681209228,6.70110798874885,9.4791256572971,6.0042071838115,17.3105319762429,6.16887780007865,2.63518327558417,32.1709067264345,33.6236437749545,29.6345412421063,10.7858329038507,2.80979464837102,3.78368419183298,0.569003702859245,10.7393601853145,0,1.83286195060783,1.93952487167626,4.48869247298039,1.70738650235495,1.18088118383682,0.470996183524124,1.35736880313981,3840.24733128693,117.959489741278,173.365033689845,272.308018098058,461.709636280233,777.072808722287,1285.35129979261,1842.98145650989,2160.28976155057,2964.43957819172,1416.11683429444,3857.61306353171,4571.0398734552,3076.91589115172,3468.82838785969,4539.79353602928,16.6277871149944,3.97931964718018,1.79261474086228,0.509235257325564,1.17345124144251,0.670025029767263,19.0434912708811,6.24427673144956,4.57141917907954,7.0868700687608,12.5969267239415,17.0417847304368,13.6421135674058,8.53429445630918,0,0,8.35999264132362,5.79467167239938,140.000114469355,106.310999739128,0,37.6181681534516,3.15508219416257,0,0,0,0.891194696329576,7.92614286208731,4.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|EntrezGene=22370
|HGNC=
|MCL_coexpression_id=8
|UniProt=
|association_with_transcript=74bp_to_ENSMUST00000146997_5end
|description=CAGE_peak_1_at_Vtn_5end
|id=chr11:78312748..78312774,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!7.89e-15!22;UBERON:0007499!7.89e-15!22;UBERON:0006925!7.89e-15!22;UBERON:0009497!7.89e-15!22;UBERON:0000015!7.89e-15!22;UBERON:0002423!7.89e-15!22;UBERON:0006235!7.89e-15!22;UBERON:0008835!7.89e-15!22;UBERON:0003894!7.89e-15!22;UBERON:0004161!7.89e-15!22;UBERON:0008836!7.89e-15!22;UBERON:0009854!3.21e-14!23;UBERON:0009856!3.21e-14!23;UBERON:0002365!2.14e-13!25;UBERON:0002330!2.14e-13!25;UBERON:0000025!6.83e-11!114;UBERON:0004111!6.90e-10!122;UBERON:0000468!3.73e-08!333;UBERON:0001049!3.78e-08!52;UBERON:0005068!3.78e-08!52;UBERON:0006241!3.78e-08!52;UBERON:0007135!3.78e-08!52;UBERON:0000949!5.03e-08!72;UBERON:0000955!5.67e-08!50;UBERON:0006238!5.67e-08!50;UBERON:0005177!6.52e-08!85;UBERON:0002616!1.28e-07!49;UBERON:0000479!2.67e-07!349;UBERON:0002346!7.76e-07!71;UBERON:0003075!7.76e-07!71;UBERON:0007284!7.76e-07!71
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.72e-15,22;UBERON:0007499,5.72e-15,22;UBERON:0006925,5.72e-15,22;UBERON:0009497,5.72e-15,22;UBERON:0000015,5.72e-15,22;UBERON:0002423,5.72e-15,22;UBERON:0006235,5.72e-15,22;UBERON:0008835,5.72e-15,22;UBERON:0003894,5.72e-15,22;UBERON:0004161,5.72e-15,22;UBERON:0008836,5.72e-15,22;UBERON:0009854,2.36e-14,23;UBERON:0009856,2.36e-14,23;UBERON:0002365,1.61e-13,25;UBERON:0002330,1.61e-13,25;UBERON:0000025,8.97e-11,114;UBERON:0004111,1.12e-09,122;UBERON:0000073,6.84e-09,54;UBERON:0001049,2.95e-08,52;UBERON:0005068,2.95e-08,52;UBERON:0006241,2.95e-08,52;UBERON:0007135,2.95e-08,52;UBERON:0000949,4.88e-08,72;UBERON:0000955,3.39e-07,47;UBERON:0006238,3.39e-07,47;UBERON:0002616,7.51e-07,46
|phase1_expression=17.6163731815273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.666219523631325,0,0,0,0,0,21.7710822786739,0,0,0,0,0,0,0,0,0,0,0,0,15.8481681015439,0,0,0,0,0,0,0,0,0,0,0,0,17.2126095756569,0,6.81027166476863,5.8328969722285,2.2397827460058,5.75010257459886,0,0,0,0,0,0.515672092277442,19.8270131642406,21.6886301501533,36.7622214033584,2.71075625655306,7.11435836888911,0,0,0,32.9560121570245,27.2794996778304,21.7748185847803,29.2962886179769,27.552569937031,59.1297537715873,84.3717826435164,9.18680994112155,11.8848384062613,10.1114066527102,110.115880999389,104.703617229854,87.2485108895463,15.6944682398931,27.4462930807229,28.129322010065,146.571074475725,153.634192538649,172.356423492242,68.3538318298909,60.0808492972214,64.6806077013793,0.530083353332288,0.453429360640713,57.3931687629322,3532.04001500859,3363.81818785224,5201.65936100528,4668.6435593615,3564.9499406335,691.267435888483,0,0,0,1.83096445709685,1.28326477414318,2.54805239706646,0,0,0,0,1352.39387139255,17.3488382043605,14.398887489288,17.3485326766136,47.1921491383819,91.5543524106552,55.4659317233651,52.3269746753886,24.2536521266274,43.7535092889842,7.22996784599558,0.884610551949874,9.54424414689714,11.9254419968613,6.30337829075789,5.59175283654366,68.8034872977136,80.0086420027398,10.9846533739694,0,0,0,95.2668466614672,49.4100651044117,19.6020789296068,93.5174842634447,64.6960107045736,85.6086743585388,74.955463537304,3.36069900706044,6.59356944233493,2.0217820674694,14.5204880561667,1.56144531555244,1.60931473103431,2.88099407688559,40.8410056334788,1.63287597963187,5.50888997224854,5.15359485078509,21.4723797713383,0,0.189106080167819,0,0.657587197282725,0.278047249225598,2.089512999133,3.08673204611915,0.995171334092466,0,0,0,2.27838349789052,9.38104239924385,0,0,1.57411385397923,0.617068451549513,1.62773761325285,1.87791380979733,1.28441876603886,3.62031669809657,32.833492815819,46.4524278697753,44.5909961647264,46.5446244417027,51.8036776415035,89.16293819119,45.4838386716437,8.59088835757875,0.264450566663544,4.69234151177515,6.50262681209228,6.70110798874885,9.4791256572971,6.0042071838115,17.3105319762429,6.16887780007865,2.63518327558417,32.1709067264345,33.6236437749545,29.6345412421063,10.7858329038507,2.80979464837102,3.78368419183298,0.569003702859245,10.7393601853145,0,1.83286195060783,1.93952487167626,4.48869247298039,1.70738650235495,1.18088118383682,0.470996183524124,1.35736880313981,3840.24733128693,117.959489741278,173.365033689845,272.308018098058,461.709636280233,777.072808722287,1285.35129979261,1842.98145650989,2160.28976155057,2964.43957819172,1416.11683429444,3857.61306353171,4571.0398734552,3076.91589115172,3468.82838785969,4539.79353602928,16.6277871149944,3.97931964718018,1.79261474086228,0.509235257325564,1.17345124144251,0.670025029767263,19.0434912708811,6.24427673144956,4.57141917907954,7.0868700687608,12.5969267239415,17.0417847304368,13.6421135674058,8.53429445630918,0,0,8.35999264132362,5.79467167239938,140.000114469355,106.310999739128,0,37.6181681534516,3.15508219416257,0,0,0,0.891194696329576,7.92614286208731,4.04810701674894,2.04579100537918,0,121.459457607443,2.41298144854057,55.2003371368491,2.76907830901079,5.93892442701128,261.507922529727,108.280163725122,103.394656481945,218.781892516842,181.610664121675,144.494519533646,41.3485269069154,70.5255435186361,115.861647975034,259.466178265305,160.236285033998,225.866839713529,7.83011093233712,26.4689808226026,57.3058969157602,45.0107773566344,29.2611385509751,53.5106452806212,42.6181963359493,66.3733589069826,1.87737366450968,2.96564899209348,2.20528398054962,5.7710188529518,2.26050197374268,3.07595917133595,2.98430860007841,2.1338316966858,14.2825609948627,86.7790413409185,0.170870880797853,11.5576646059405,4.62986318424279,1.31857919903284,0.683471138605126,0.457556346413045,0,0,0,28.6401185404534,2.84702394223022,23.7883776538413,9.72048067396211,6.89991376847747,33.191109689419,90.6288407705995,379.544668690743,13.8730649251536,1.55537967950151,7.45607175704311,0,0.598066184175915,1.15820943319968,1.36115831840833,2.45403664607689,4.39285926276023,4.5769323071844,63.2793310341598,1.46803082195995,1.93267296660805,4.89651010638371,1.89606672376907,1.62180172232131,0.821687657318618,2.20865399062252,1.43221356533985,1.19208812868759,1.44234539423963,1.62458479892035,2.42319479875554,1.143102099825,1.31074040677893,1.94915761479505,0.962118416403295,1.8700304349051,15.8711268530648,0,0,0,2.31827512838629,4.129014459926,3.6630324853453,1.71494703263253,0.501572104035363,48.0039066224507,40.0482955761244,31.5092532391668,82.48952752497,40.4198686664679,35.5035131773159,45.226507515531,41.8798718998525,43.5016712624836,43.4918661871529,4.67043064128795,8.37952234142165,32.2686514875314,109.398022680732,44.2283773145043,56.2561135857043,127.791868485929,112.083071137958,94.3502476199937,114.724534140764,105.193909454449,112.609925807487,142.522374369161,124.528921427471,150.423493194751,116.691954364353,107.88830745466,116.517169160078,92.7193276807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|short_description=p1@Vtn
}}

Revision as of 21:03, 12 September 2013

Short description:p1@Vtn
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Vtn_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 74bp_to_ENSMUST00000146997_5end
EntrezGene:Vtn
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Vtn

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G717.62
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B717.21
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.81
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.24
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C319.83
Mouse Granule cells, donor2.CNhs12357.11731-123E321.69
Mouse Granule cells, donor3.CNhs12108.11636-122C736.76
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C832.96
Mouse Microglia, donor2.CNhs12634.11736-123E827.28
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.77
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F529.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.55
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F159.13
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D584.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D29.19
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F211.88
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3110.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3104.70
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D787.25
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D415.69
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F427.45
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4146.57
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5153.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6172.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D668.35
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F660.08
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E164.68
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G357.39
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73532.04
Mouse hepatocyte, donor1.CNhs13078.11714-123C43363.82
Mouse hepatocyte, donor3.CNhs12615.11637-122C85201.66
Mouse hepatocyte, donor6.CNhs13090.11822-124F44668.64
Mouse hepatocyte, donor8.CNhs13091.11824-124F63564.95
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A7691.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.83
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61352.39
accessory axillary lymph node, adult.CNhs10475.1063-29H917.35
adrenal gland, adult.CNhs10508.49-24D714.40
adrenal gland, embryo E14.CNhs11038.406-44C517.35
adrenal gland, embryo E16.CNhs11004.1254-43D647.19
adrenal gland, embryo E17.CNhs11043.1263-45I191.55
adrenal gland, embryo E18.CNhs11026.1262-18F555.47
adrenal gland, neonate N00.CNhs11191.1311-23C152.33
adrenal gland, neonate N25.CNhs11223.1377-27I324.25
amnion, adult pregnant day17.5.CNhs10488.583-22A843.75
aorta, adult.CNhs10498.46-23H17.23
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A611.93
bone (os femoris), neonate N20.CNhs11195.1350-25C36.30
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B268.80
cerebellum, neonate N30.CNhs11135.1395-42I280.01
colon, adult.CNhs10468.36-18H710.98
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A495.27
corpus striatum, adult.CNhs10487.19-21D849.41
corpus striatum, neonate N00.CNhs11226.630-43F119.60
cortex, adult.CNhs10473.12-14D593.52
cortex, neonate N30.CNhs11107.1392-42F264.70
diencephalon, adult.CNhs10482.20-12F285.61
diencephalon, neonate N30.CNhs11201.1388-42B274.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.36
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.59
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G414.52
eyeball, embryo E12.CNhs11016.345-16C61.56
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D440.84
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E75.51
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A221.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.66
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B53.09
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F59.38
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C81.57
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I23.62
heart, neonate N10.CNhs11118.749-24G132.83
heart, neonate N16.CNhs11209.782-15G146.45
heart, neonate N20.CNhs11127.821-26I644.59
heart, neonate N25.CNhs11196.1351-25D346.54
heart, neonate N30.CNhs11202.1390-42D251.80
hippocampus, adult.CNhs10478.13-16E889.16
hippocampus, neonate N00.CNhs11228.627-43G145.48
intestinal mucosa, adult.CNhs10506.860-29I38.59
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I54.69
intestine, embryo E13.CNhs11010.381-16D56.50
intestine, embryo E15.CNhs10602.976-16D86.70
intestine, embryo E16.CNhs10585.463-22H49.48
intestine, embryo E17.CNhs10582.482-18D36.00
intestine, embryo E18.CNhs10526.1289-20F717.31
intestine, neonate N00.CNhs11126.644-26D16.17
intestine, neonate N01.CNhs11192.1322-23E92.64
intestine, neonate N06.CNhs11102.688-20B832.17
intestine, neonate N07.CNhs11095.720-20F233.62
intestine, neonate N10.CNhs11098.755-23A529.63
intestine, neonate N20.CNhs11187.827-18D110.79
intestine, neonate N25.CNhs11121.1352-25E32.81
intestine, neonate N30.CNhs11131.1384-42G13.78
kidney, embryo E14.CNhs10606.411-4I90.57
kidney, embryo E15.CNhs10997.434-16F810.74
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.83
kidney, embryo E18.CNhs11001.1288-20C71.94
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D51.71
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B23840.25
liver, embryo E12.CNhs10601.355-15F8117.96
liver, embryo E13.CNhs10524.378-3H6173.37
liver, embryo E14.CNhs10594.409-16E1272.31
liver, embryo E15.CNhs10520.433-16D7461.71
liver, embryo E16.CNhs10523.462-17F5777.07
liver, embryo E17.CNhs10510.481-18A31285.35
liver, embryo E18.CNhs10579.499-43G41842.98
liver, neonate N00.CNhs11117.641-24F42160.29
liver, neonate N03.CNhs11123.1345-25G22964.44
liver, neonate N06.CNhs11101.684-20A81416.12
liver, neonate N07.CNhs11103.716-20H23857.61
liver, neonate N10.CNhs11115.751-24B94571.04
liver, neonate N20.CNhs11220.823-25A33076.92
liver, neonate N25.CNhs11198.1368-26H13468.83
liver, neonate N30.CNhs11106.1382-42D14539.79
lung, adult.CNhs10474.28-22B116.63
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.17
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I619.04
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E54.57
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E612.60
lung, neonate N20.CNhs11109.822-18A417.04
lung, neonate N25.CNhs11119.1359-25C713.64
lung, neonate N30.CNhs11133.1394-42H28.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B68.36
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C2140.00
medulla oblongata, neonate N30.CNhs11200.1396-42A3106.31
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C237.62
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.16
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D97.93
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.05
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.05
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I9121.46
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H755.20
ovary, neonate N00.CNhs11217.1299-22I42.77
oviduct, adult pregnant day01.CNhs10500.988-6G65.94
pancreas, adult.CNhs10486.34-16E4261.51
pancreas, embryo E14.CNhs11012.405-44F4108.28
pancreas, embryo E15.CNhs11042.1556-45F2103.39
pancreas, embryo E16.CNhs11003.460-26E5218.78
pancreas, embryo E17.CNhs10599.1558-45G3181.61
pancreas, embryo E18.CNhs10580.1535-43I7144.49
pancreas, neonate N00.CNhs11105.645-26G941.35
pancreas, neonate N01.CNhs11138.1531-43D770.53
pancreas, neonate N02.CNhs11139.1539-43D8115.86
pancreas, neonate N16.CNhs11136.787-43B6259.47
pancreas, neonate N25.CNhs11094.1555-45E2160.24
pancreas, neonate N30.CNhs11182.1548-44H5225.87
pituitary gland, adult.CNhs10493.21-1G87.83
pituitary gland, embryo E12.CNhs11018.346-16E626.47
pituitary gland, embryo E13.CNhs11009.370-44C757.31
pituitary gland, embryo E14.CNhs11037.398-44A545.01
pituitary gland, embryo E15.CNhs10592.427-16B929.26
pituitary gland, embryo E16.CNhs11036.449-43F653.51
pituitary gland, embryo E17.CNhs11039.1265-44F542.62
pituitary gland, neonate N00.CNhs11190.1308-22E966.37
placenta, adult pregnant day10.CNhs10472.539-13I71.88
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.21
skin, adult.CNhs10492.30-1C35.77
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.98
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I114.28
spinal cord, adult.CNhs10505.24-13C986.78
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C111.56
spleen, embryo E18.CNhs11011.1271-21F24.63
spleen, neonate N10.CNhs11116.752-24D11.32
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H628.64
stomach, embryo E12.CNhs10588.356-43E32.85
stomach, embryo E15.CNhs10603.1252-16G823.79
stomach, embryo E16.CNhs11022.459-17D49.72
stomach, embryo E17.CNhs11006.1035-18D56.90
stomach, embryo E18.CNhs10999.1286-20C633.19
stomach, neonate N03.CNhs11193.1340-24B890.63
stomach, neonate N07.CNhs11210.718-18A9379.54
stomach, neonate N25.CNhs11104.1355-25E413.87
stomach, neonate N30.CNhs11134.1386-42I11.56
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.36
testis, embryo E17.CNhs11029.486-18I52.45
testis, embryo E18.CNhs11027.503-18G54.39
testis, neonate N00.CNhs11189.1300-22B74.58
testis, neonate N07.CNhs11222.726-26I463.28
testis, neonate N10.CNhs11204.763-44D91.47
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I20.82
thymus, embryo E16.CNhs11002.456-26C52.21
thymus, embryo E17.CNhs10581.478-18C11.43
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.44
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C42.42
thymus, neonate N07.CNhs11211.713-19D31.14
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.95
thymus, neonate N25.CNhs11125.1362-25G70.96
thymus, neonate N30.CNhs11132.1393-42G21.87
tongue, adult.CNhs10499.32-1B415.87
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.32
uterus, adult pregnant day19.CNhs10497.590-15F54.13
uterus, adult.CNhs10509.92-27E53.66
vagina, adult.CNhs10502.89-27D51.71
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A148.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A240.05
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A331.51
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D782.49
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A440.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A645.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A741.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A843.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A943.49
whole body, embryo E11.CNhs11014.324-5I84.67
whole body, embryo E12.CNhs10587.857-27C98.38
whole body, embryo E13.CNhs10512.372-23H232.27
whole body, embryo E14.5.CNhs10578.420-27D2109.40
whole body, embryo E14.CNhs10519.395-14B144.23
whole body, embryo E16.CNhs10514.453-14F256.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G5127.79
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5112.08
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G594.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G5114.72
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G5105.19
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5112.61
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5142.52
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5124.53
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5150.42
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5116.69
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5107.89
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5116.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G592.72
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5111.87
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G5126.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5134.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5134.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5122.53
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5121.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5130.31
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5111.40
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5111.54
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5145.04
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G581.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5116.74
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5130.03
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G568.75
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5130.15
whole body, embryo E17.5.CNhs10513.490-9F9142.75
whole body, embryo E17.CNhs10517.475-3I525.23
whole body, embryo E18.CNhs10516.493-3B3163.52
whole body, neonate N00.CNhs10525.657-19C2187.80
whole body, neonate N01.CNhs10576.659-23C613.96
whole body, neonate N06.CNhs10515.692-21D150.96
whole body, neonate N10.CNhs10518.761-6B432.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
liver5.72e-1522
epithelial sac5.72e-1522
digestive gland5.72e-1522
epithelium of foregut-midgut junction5.72e-1522
anatomical boundary5.72e-1522
hepatobiliary system5.72e-1522
foregut-midgut junction5.72e-1522
hepatic diverticulum5.72e-1522
liver primordium5.72e-1522
septum transversum5.72e-1522
liver bud5.72e-1522
digestive tract diverticulum2.36e-1423
sac2.36e-1423
exocrine gland1.61e-1325
exocrine system1.61e-1325
tube8.97e-11114
anatomical conduit1.12e-09122
regional part of nervous system6.84e-0954
neural tube2.95e-0852
neural rod2.95e-0852
future spinal cord2.95e-0852
neural keel2.95e-0852
endocrine system4.88e-0872
brain3.39e-0747
future brain3.39e-0747
regional part of brain7.51e-0746







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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