FFCP PHASE1:Mm9::chr8:69221163..69221172,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18166|HGNC=|MCL_coexpression_id=98|UniProt=Q04573,Q3V1K5|association_with_transcript=-148bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end|description=CAGE_peak_6_at_Npy1r_5end|id=chr8:69221163..69221172,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.33e-65,3;CL:0000359,1.33e-65,3;CL:0002539,1.33e-65,3;CL:0000514,1.33e-65,3;CL:0000680,2.03e-33,6;CL:0000187,2.03e-33,6;CL:0000056,2.03e-33,6;CL:0000222,8.27e-29,7;CL:0000355,1.19e-22,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!4.86e-10!122;UBERON:0001049!7.29e-10!52;UBERON:0005068!7.29e-10!52;UBERON:0006241!7.29e-10!52;UBERON:0007135!7.29e-10!52;UBERON:0002346!4.85e-09!71;UBERON:0003075!4.85e-09!71;UBERON:0007284!4.85e-09!71;UBERON:0000025!5.11e-09!114;UBERON:0002616!7.48e-09!49;UBERON:0002020!1.27e-08!34;UBERON:0003080!1.43e-08!40;UBERON:0000955!1.48e-08!50;UBERON:0006238!1.48e-08!50;UBERON:0000956!5.21e-08!21;UBERON:0001869!5.21e-08!21;UBERON:0000203!5.21e-08!21;UBERON:0002780!8.83e-08!39;UBERON:0001890!8.83e-08!39;UBERON:0006240!8.83e-08!39;UBERON:0000947!1.20e-07!4;UBERON:0001637!1.20e-07!4;UBERON:0003509!1.20e-07!4;UBERON:0004573!1.20e-07!4;UBERON:0004571!1.20e-07!4;UBERON:0010191!1.20e-07!4;UBERON:0004572!1.20e-07!4;UBERON:0002619!1.25e-07!17;UBERON:0003056!1.42e-07!49;UBERON:0002021!1.51e-07!10;UBERON:0000411!1.51e-07!10;UBERON:0001950!1.51e-07!10;UBERON:0002791!4.51e-07!29;UBERON:0003528!4.51e-07!29;UBERON:0001893!4.51e-07!29;UBERON:0000033!6.79e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.46e-86,4;UBERON:0001637,1.46e-86,4;UBERON:0004573,1.46e-86,4;UBERON:0003509,1.46e-86,4;UBERON:0004571,1.46e-86,4;UBERON:0010191,1.46e-86,4;UBERON:0004572,1.46e-86,4;UBERON:0000055,1.65e-69,5;UBERON:0007500,1.65e-69,5;UBERON:0001981,1.65e-69,5;UBERON:0002049,1.65e-69,5;UBERON:0007798,1.65e-69,5;UBERON:0004537,1.65e-69,5;UBERON:0006965,1.65e-69,5;UBERON:0001135,1.33e-65,3;UBERON:0004237,1.33e-65,3;UBERON:0004695,1.33e-65,3;UBERON:0002111,1.33e-65,3;UBERON:0004178,1.33e-65,3;UBERON:0001134,1.19e-22,9;UBERON:0002036,1.19e-22,9;UBERON:0002385,1.19e-22,9;UBERON:0000486,1.19e-22,9;UBERON:0007503,1.19e-22,9;UBERON:0001015,1.19e-22,9;UBERON:0002329,1.19e-22,9;UBERON:0003082,1.19e-22,9;UBERON:0003059,1.19e-22,9;UBERON:0007282,1.19e-22,9;UBERON:0004290,1.19e-22,9;UBERON:0009618,1.19e-22,9;UBERON:0000383,1.71e-20,10;UBERON:0007524,1.00e-18,11;UBERON:0003077,1.00e-18,11;UBERON:0007285,1.00e-18,11;UBERON:0004535,6.04e-16,23;UBERON:0001009,6.04e-16,23;UBERON:0004872,2.20e-11,33;UBERON:0003914,3.12e-08,47;UBERON:0002204,5.08e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.24406179902447,1.83546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p6@Npy1r}} | ||
|EntrezGene=18166 | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|UniProt=Q04573,Q3V1K5 | |||
|association_with_transcript=-148bp_to_ENSMUST00000039303,NM_010934,uc009lvt.2,uc012gej.1_5end | |||
|description=CAGE_peak_6_at_Npy1r_5end | |||
|id=chr8:69221163..69221172,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.33e-65,3;CL:0000359,1.33e-65,3;CL:0002539,1.33e-65,3;CL:0000514,1.33e-65,3;CL:0000680,2.03e-33,6;CL:0000187,2.03e-33,6;CL:0000056,2.03e-33,6;CL:0000222,8.27e-29,7;CL:0000355,1.19e-22,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!4.86e-10!122;UBERON:0001049!7.29e-10!52;UBERON:0005068!7.29e-10!52;UBERON:0006241!7.29e-10!52;UBERON:0007135!7.29e-10!52;UBERON:0002346!4.85e-09!71;UBERON:0003075!4.85e-09!71;UBERON:0007284!4.85e-09!71;UBERON:0000025!5.11e-09!114;UBERON:0002616!7.48e-09!49;UBERON:0002020!1.27e-08!34;UBERON:0003080!1.43e-08!40;UBERON:0000955!1.48e-08!50;UBERON:0006238!1.48e-08!50;UBERON:0000956!5.21e-08!21;UBERON:0001869!5.21e-08!21;UBERON:0000203!5.21e-08!21;UBERON:0002780!8.83e-08!39;UBERON:0001890!8.83e-08!39;UBERON:0006240!8.83e-08!39;UBERON:0000947!1.20e-07!4;UBERON:0001637!1.20e-07!4;UBERON:0003509!1.20e-07!4;UBERON:0004573!1.20e-07!4;UBERON:0004571!1.20e-07!4;UBERON:0010191!1.20e-07!4;UBERON:0004572!1.20e-07!4;UBERON:0002619!1.25e-07!17;UBERON:0003056!1.42e-07!49;UBERON:0002021!1.51e-07!10;UBERON:0000411!1.51e-07!10;UBERON:0001950!1.51e-07!10;UBERON:0002791!4.51e-07!29;UBERON:0003528!4.51e-07!29;UBERON:0001893!4.51e-07!29;UBERON:0000033!6.79e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000947,1.46e-86,4;UBERON:0001637,1.46e-86,4;UBERON:0004573,1.46e-86,4;UBERON:0003509,1.46e-86,4;UBERON:0004571,1.46e-86,4;UBERON:0010191,1.46e-86,4;UBERON:0004572,1.46e-86,4;UBERON:0000055,1.65e-69,5;UBERON:0007500,1.65e-69,5;UBERON:0001981,1.65e-69,5;UBERON:0002049,1.65e-69,5;UBERON:0007798,1.65e-69,5;UBERON:0004537,1.65e-69,5;UBERON:0006965,1.65e-69,5;UBERON:0001135,1.33e-65,3;UBERON:0004237,1.33e-65,3;UBERON:0004695,1.33e-65,3;UBERON:0002111,1.33e-65,3;UBERON:0004178,1.33e-65,3;UBERON:0001134,1.19e-22,9;UBERON:0002036,1.19e-22,9;UBERON:0002385,1.19e-22,9;UBERON:0000486,1.19e-22,9;UBERON:0007503,1.19e-22,9;UBERON:0001015,1.19e-22,9;UBERON:0002329,1.19e-22,9;UBERON:0003082,1.19e-22,9;UBERON:0003059,1.19e-22,9;UBERON:0007282,1.19e-22,9;UBERON:0004290,1.19e-22,9;UBERON:0009618,1.19e-22,9;UBERON:0000383,1.71e-20,10;UBERON:0007524,1.00e-18,11;UBERON:0003077,1.00e-18,11;UBERON:0007285,1.00e-18,11;UBERON:0004535,6.04e-16,23;UBERON:0001009,6.04e-16,23;UBERON:0004872,2.20e-11,33;UBERON:0003914,3.12e-08,47;UBERON:0002204,5.08e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02869817521847,3.24406179902447,1.83546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0.571301968807607,0,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,0,1.01219549843938,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0,0.162241263067758,0.101839363850316,0.124406970610093,0.252722758433675,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0.180062061461015,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0,0,0,0.134206418760372,0.420579897128254,0.514523061896422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0.304464949114599,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579568782096571,0,0,0.214368379079066,0,0,0.460325236507177,0,0.68741272937475,0.685082519770642,0.755393897389701,0.675022500231806,0.45032120322422,0.906284817968409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.0846146078916765,0.365855945745545,0.263069711437843,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@Npy1r | |||
}} |
Revision as of 15:53, 14 September 2013
Short description: | p6@Npy1r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Npy1r_5end |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | -148bp_to_ENSMUST00000039303, NM_010934, uc009lvt.2, uc012gej.1_5end |
EntrezGene: | Npy1r |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.33e-65 | 3 |
vascular associated smooth muscle cell | 1.33e-65 | 3 |
aortic smooth muscle cell | 1.33e-65 | 3 |
smooth muscle myoblast | 1.33e-65 | 3 |
muscle precursor cell | 2.03e-33 | 6 |
muscle cell | 2.03e-33 | 6 |
myoblast | 2.03e-33 | 6 |
mesodermal cell | 8.27e-29 | 7 |
multi-potent skeletal muscle stem cell | 1.19e-22 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.