FFCP PHASE1:Mm9::chrX:132619745..132619789,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=245610|HGNC=|MCL_coexpression_id=2079|UniProt=B1AUS0|association_with_transcript=0bp_to_ENSMUST00000138878_5end|description=CAGE_peak_1_at_Nxf3_5end|id=chrX:132619745..132619789,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003135!1.08e-29!15;UBERON:0004176!2.24e-29!17;UBERON:0009196!2.24e-29!17;UBERON:0009117!2.24e-29!17;UBERON:0003101!1.28e-27!16;UBERON:0000079!1.28e-27!16;UBERON:0000991!1.55e-27!18;UBERON:0005564!1.55e-27!18;UBERON:0000473!2.98e-27!14;UBERON:0003133!7.67e-23!24;UBERON:0005156!8.94e-21!26;UBERON:0000990!8.94e-21!26;UBERON:0003886!5.81e-13!38;UBERON:0002553!1.57e-12!39;UBERON:0002323!1.65e-11!37;UBERON:0004458!1.65e-11!37;UBERON:0001301!3.65e-08!3;UBERON:0006555!3.65e-08!3;UBERON:0005103!3.65e-08!3;UBERON:0000083!3.65e-08!3;UBERON:0009201!3.65e-08!3;UBERON:0004819!3.65e-08!3;UBERON:0006553!3.65e-08!3;UBERON:0003074!3.65e-08!3;UBERON:0003060!3.65e-08!3;UBERON:0004871!1.06e-07!3;UBERON:0000464!2.21e-07!57|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.41e-41,15;UBERON:0003101,1.84e-38,16;UBERON:0000079,1.84e-38,16;UBERON:0004176,7.53e-36,17;UBERON:0009196,7.53e-36,17;UBERON:0009117,7.53e-36,17;UBERON:0000473,1.79e-35,14;UBERON:0000991,8.26e-34,18;UBERON:0005564,8.26e-34,18;UBERON:0003133,1.17e-30,24;UBERON:0005156,3.22e-28,26;UBERON:0000990,3.22e-28,26;UBERON:0003886,5.82e-19,38;UBERON:0002553,1.91e-18,39;UBERON:0002323,6.00e-16,37;UBERON:0004458,6.00e-16,37;UBERON:0001301,1.21e-09,3;UBERON:0006555,1.21e-09,3;UBERON:0005103,1.21e-09,3;UBERON:0000083,1.21e-09,3;UBERON:0009201,1.21e-09,3;UBERON:0004819,1.21e-09,3;UBERON:0006553,1.21e-09,3;UBERON:0003074,1.21e-09,3;UBERON:0003060,1.21e-09,3;UBERON:0000080,1.92e-07,4;UBERON:0005904,1.92e-07,4;UBERON:0006947,1.92e-07,4;UBERON:0002120,1.92e-07,4;UBERON:0004054,1.92e-07,4;UBERON:0004875,1.92e-07,4;UBERON:0004876,1.92e-07,4;UBERON:0005721,1.92e-07,4;UBERON:0005754,1.92e-07,4;UBERON:0007297,1.92e-07,4|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3839394286445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,8.9573018839267,115.494300604189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,1.98716119291576,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,69.3342314581554,0.149516546043979,0.165458490457098,1.55560950675238,0.258319646955462,1.35164900392623,1.29092962510329,1.0416350787516,44.1457840032243,160.653440349294,99.6583821652215,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Nxf3}} | ||
|EntrezGene=245610 | |||
|HGNC= | |||
|MCL_coexpression_id=2079 | |||
|UniProt=B1AUS0 | |||
|association_with_transcript=0bp_to_ENSMUST00000138878_5end | |||
|description=CAGE_peak_1_at_Nxf3_5end | |||
|id=chrX:132619745..132619789,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.08e-29!15;UBERON:0004176!2.24e-29!17;UBERON:0009196!2.24e-29!17;UBERON:0009117!2.24e-29!17;UBERON:0003101!1.28e-27!16;UBERON:0000079!1.28e-27!16;UBERON:0000991!1.55e-27!18;UBERON:0005564!1.55e-27!18;UBERON:0000473!2.98e-27!14;UBERON:0003133!7.67e-23!24;UBERON:0005156!8.94e-21!26;UBERON:0000990!8.94e-21!26;UBERON:0003886!5.81e-13!38;UBERON:0002553!1.57e-12!39;UBERON:0002323!1.65e-11!37;UBERON:0004458!1.65e-11!37;UBERON:0001301!3.65e-08!3;UBERON:0006555!3.65e-08!3;UBERON:0005103!3.65e-08!3;UBERON:0000083!3.65e-08!3;UBERON:0009201!3.65e-08!3;UBERON:0004819!3.65e-08!3;UBERON:0006553!3.65e-08!3;UBERON:0003074!3.65e-08!3;UBERON:0003060!3.65e-08!3;UBERON:0004871!1.06e-07!3;UBERON:0000464!2.21e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.41e-41,15;UBERON:0003101,1.84e-38,16;UBERON:0000079,1.84e-38,16;UBERON:0004176,7.53e-36,17;UBERON:0009196,7.53e-36,17;UBERON:0009117,7.53e-36,17;UBERON:0000473,1.79e-35,14;UBERON:0000991,8.26e-34,18;UBERON:0005564,8.26e-34,18;UBERON:0003133,1.17e-30,24;UBERON:0005156,3.22e-28,26;UBERON:0000990,3.22e-28,26;UBERON:0003886,5.82e-19,38;UBERON:0002553,1.91e-18,39;UBERON:0002323,6.00e-16,37;UBERON:0004458,6.00e-16,37;UBERON:0001301,1.21e-09,3;UBERON:0006555,1.21e-09,3;UBERON:0005103,1.21e-09,3;UBERON:0000083,1.21e-09,3;UBERON:0009201,1.21e-09,3;UBERON:0004819,1.21e-09,3;UBERON:0006553,1.21e-09,3;UBERON:0003074,1.21e-09,3;UBERON:0003060,1.21e-09,3;UBERON:0000080,1.92e-07,4;UBERON:0005904,1.92e-07,4;UBERON:0006947,1.92e-07,4;UBERON:0002120,1.92e-07,4;UBERON:0004054,1.92e-07,4;UBERON:0004875,1.92e-07,4;UBERON:0004876,1.92e-07,4;UBERON:0005721,1.92e-07,4;UBERON:0005754,1.92e-07,4;UBERON:0007297,1.92e-07,4 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.3839394286445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0.30559649555362,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,2.38755514223978,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0.23517741427141,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.203678727700633,8.9573018839267,115.494300604189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0.315508219416257,0,0,0.238968797952552,0,0,0,0,0,0,1.98716119291576,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,69.3342314581554,0.149516546043979,0.165458490457098,1.55560950675238,0.258319646955462,1.35164900392623,1.29092962510329,1.0416350787516,44.1457840032243,160.653440349294,99.6583821652215,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Nxf3 | |||
}} |
Revision as of 19:19, 14 September 2013
Short description: | p1@Nxf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nxf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:2079 |
Association with transcript: | 0bp_to_ENSMUST00000138878_5end |
EntrezGene: | Nxf3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 4.41e-41 | 15 |
male organism | 1.84e-38 | 16 |
male reproductive system | 1.84e-38 | 16 |
external genitalia | 7.53e-36 | 17 |
indifferent external genitalia | 7.53e-36 | 17 |
indifferent gonad | 7.53e-36 | 17 |
testis | 1.79e-35 | 14 |
gonad | 8.26e-34 | 18 |
gonad primordium | 8.26e-34 | 18 |
reproductive organ | 1.17e-30 | 24 |
reproductive structure | 3.22e-28 | 26 |
reproductive system | 3.22e-28 | 26 |
body cavity precursor | 5.82e-19 | 38 |
anatomical cavity | 1.91e-18 | 39 |
body cavity | 6.00e-16 | 37 |
body cavity or lining | 6.00e-16 | 37 |
epididymis | 1.21e-09 | 3 |
excretory tube | 1.21e-09 | 3 |
mesonephric epithelium | 1.21e-09 | 3 |
mesonephric tubule | 1.21e-09 | 3 |
nephric duct | 1.21e-09 | 3 |
kidney epithelium | 1.21e-09 | 3 |
renal duct | 1.21e-09 | 3 |
mesonephric duct | 1.21e-09 | 3 |
pronephric duct | 1.21e-09 | 3 |
mesonephros | 1.92e-07 | 4 |
duct of male reproductive system | 1.92e-07 | 4 |
male genital duct | 1.92e-07 | 4 |
pronephros | 1.92e-07 | 4 |
internal male genitalia | 1.92e-07 | 4 |
nephrogenic cord | 1.92e-07 | 4 |
urogenital ridge | 1.92e-07 | 4 |
pronephric mesoderm | 1.92e-07 | 4 |
rostral part of nephrogenic cord | 1.92e-07 | 4 |
presumptive pronephric mesoderm | 1.92e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.