FFCP PHASE1:Mm9::chr18:43367179..43367192,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100047004,269019|HGNC=|UniProt=Q8BGW6|association_with_transcript=-158bp_to_ENSMUST00000045477,NM_178749,uc008eue.1,uc012bcj.1_5end|description=CAGE_peak_3_at_LOC100047004_5end,CAGE_peak_3_at_Stk32a_5end|id=chr18:43367179..43367192,+|ontology_enrichment_celltype=CL:0000107!4.69e-08!9|ontology_enrichment_celltype_v019_2=CL:0000107,4.83e-19,9;CL:0000540,4.14e-08,33;CL:0000047,4.14e-08,33;CL:0000031,4.14e-08,33;CL:0000404,4.14e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!2.16e-14!71;UBERON:0003075!2.16e-14!71;UBERON:0007284!2.16e-14!71;UBERON:0004121!4.51e-13!102;UBERON:0000924!4.51e-13!102;UBERON:0006601!4.51e-13!102;UBERON:0001017!3.80e-10!73;UBERON:0005743!3.80e-10!73;UBERON:0000073!7.17e-10!75;UBERON:0001016!7.17e-10!75;UBERON:0002410!4.69e-08!9;UBERON:0001894!4.85e-08!10;UBERON:0006222!4.85e-08!10;UBERON:0003056!1.72e-07!49;UBERON:0001049!2.51e-07!52;UBERON:0005068!2.51e-07!52;UBERON:0006241!2.51e-07!52;UBERON:0007135!2.51e-07!52;UBERON:0002342!7.19e-07!10;UBERON:0005062!7.19e-07!10;UBERON:0000007!8.23e-07!8;UBERON:0003296!8.23e-07!8;UBERON:0010133!8.23e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.83e-19,9;UBERON:0001894,3.07e-16,10;UBERON:0006222,3.07e-16,10;UBERON:0000010,3.27e-15,11;UBERON:0001017,2.04e-13,73;UBERON:0000007,5.89e-13,8;UBERON:0003296,5.89e-13,8;UBERON:0010133,5.89e-13,8;UBERON:0001016,6.99e-13,75;UBERON:0004121,8.87e-11,95;UBERON:0000924,8.87e-11,95;UBERON:0006601,8.87e-11,95;UBERON:0002346,4.16e-09,64;UBERON:0003075,4.16e-09,64;UBERON:0007284,4.16e-09,64;UBERON:0000011,1.35e-07,3;UBERON:0001049,2.02e-07,52;UBERON:0005068,2.02e-07,52;UBERON:0006241,2.02e-07,52;UBERON:0007135,2.02e-07,52;UBERON:0000013,2.20e-07,3;UBERON:0010371,2.27e-07,73;UBERON:0010313,3.07e-07,3;UBERON:0002342,3.07e-07,3;UBERON:0002005,3.07e-07,3;UBERON:0005428,3.07e-07,3;UBERON:0005062,3.07e-07,3;UBERON:0010314,4.56e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.479227355091182,0,0,0.510749352340751,0.614426133024974,0.263772575460388,0,0.52091337055676,0.837548997004143,2.8138130501584,1.68078072554491,1.17851434189467,0.711858403995515,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.7813056687779,2.25530924795977,0.913396434936424,0.691846491768175,0.753613202763113,1.52865319276416,0.753999547978053,20.0227923864843,0,0,0.161766849947409,0,0,0,1.17112318804619,0,0,0,0,0,1.04853447583376,8.23501085073528,0,0.347648640384553,1.27857728665165,1.45451631191692,1.78465389374533,0,0,0,0.210441855886474,0.520481771850815,1.14951052216736,0.540186389416048,0.90422890701429,0.748401490664606,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0.639864751605702,0.928946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,1.15289268306808,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.995706366271836,0.379335801906163,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,1.33258057791605,1.26473074248515,1.18088118383682,1.09899109488962,0.740382983530803,0,0.333690211432188,0.982794975566015,0.449724224769707,0.202860121388503,0.482354319504834,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0,0,0,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0,0,2.52406575533005,2.34263246577983,4.09304455692318,4.06246956519338,3.56477878531831,5.09537755419898,2.02405350837447,6.42962887404886,3.95287777946523,0,0.283880170416537,0,0,0,0,0.485561272309963,0.604647113929502,0.754420319023592,0.295301892880773,2.15204603560749,1.55056975900933,2.90826983582004,1.42598951353889,0.316036757935816,1.05418608574999,0,10.8940673841212,0.720244376125241,1.4229455216103,3.64372959553707,4.96552654198366,3.38900753443934,3.9491764944509,3.34911444026059,0,0,0.661585194164886,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.324016022465404,0,1.31017538247707,0.809186078308924,0.909188012978695,0,0.777689839750757,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.5015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| ||
|EntrezGene=100047004,269019 | |||
|HGNC= | |||
|UniProt=Q8BGW6 | |||
|association_with_transcript=-158bp_to_ENSMUST00000045477,NM_178749,uc008eue.1,uc012bcj.1_5end | |||
|description=CAGE_peak_3_at_LOC100047004_5end,CAGE_peak_3_at_Stk32a_5end | |||
|id=chr18:43367179..43367192,+ | |||
|ontology_enrichment_celltype=CL:0000107!4.69e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,4.83e-19,9;CL:0000540,4.14e-08,33;CL:0000047,4.14e-08,33;CL:0000031,4.14e-08,33;CL:0000404,4.14e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!2.16e-14!71;UBERON:0003075!2.16e-14!71;UBERON:0007284!2.16e-14!71;UBERON:0004121!4.51e-13!102;UBERON:0000924!4.51e-13!102;UBERON:0006601!4.51e-13!102;UBERON:0001017!3.80e-10!73;UBERON:0005743!3.80e-10!73;UBERON:0000073!7.17e-10!75;UBERON:0001016!7.17e-10!75;UBERON:0002410!4.69e-08!9;UBERON:0001894!4.85e-08!10;UBERON:0006222!4.85e-08!10;UBERON:0003056!1.72e-07!49;UBERON:0001049!2.51e-07!52;UBERON:0005068!2.51e-07!52;UBERON:0006241!2.51e-07!52;UBERON:0007135!2.51e-07!52;UBERON:0002342!7.19e-07!10;UBERON:0005062!7.19e-07!10;UBERON:0000007!8.23e-07!8;UBERON:0003296!8.23e-07!8;UBERON:0010133!8.23e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,4.83e-19,9;UBERON:0001894,3.07e-16,10;UBERON:0006222,3.07e-16,10;UBERON:0000010,3.27e-15,11;UBERON:0001017,2.04e-13,73;UBERON:0000007,5.89e-13,8;UBERON:0003296,5.89e-13,8;UBERON:0010133,5.89e-13,8;UBERON:0001016,6.99e-13,75;UBERON:0004121,8.87e-11,95;UBERON:0000924,8.87e-11,95;UBERON:0006601,8.87e-11,95;UBERON:0002346,4.16e-09,64;UBERON:0003075,4.16e-09,64;UBERON:0007284,4.16e-09,64;UBERON:0000011,1.35e-07,3;UBERON:0001049,2.02e-07,52;UBERON:0005068,2.02e-07,52;UBERON:0006241,2.02e-07,52;UBERON:0007135,2.02e-07,52;UBERON:0000013,2.20e-07,3;UBERON:0010371,2.27e-07,73;UBERON:0010313,3.07e-07,3;UBERON:0002342,3.07e-07,3;UBERON:0002005,3.07e-07,3;UBERON:0005428,3.07e-07,3;UBERON:0005062,3.07e-07,3;UBERON:0010314,4.56e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,1.90509202037889,1.23012957516914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0.299600110518405,0,0,0,0,0.571301968807607,0.441737081903227,0.122490799214954,0.479227355091182,0,0,0.510749352340751,0.614426133024974,0.263772575460388,0,0.52091337055676,0.837548997004143,2.8138130501584,1.68078072554491,1.17851434189467,0.711858403995515,1.3047961207771,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,1.7813056687779,2.25530924795977,0.913396434936424,0.691846491768175,0.753613202763113,1.52865319276416,0.753999547978053,20.0227923864843,0,0,0.161766849947409,0,0,0,1.17112318804619,0,0,0,0,0,1.04853447583376,8.23501085073528,0,0.347648640384553,1.27857728665165,1.45451631191692,1.78465389374533,0,0,0,0.210441855886474,0.520481771850815,1.14951052216736,0.540186389416048,0.90422890701429,0.748401490664606,0.384341160854549,0.562210347358373,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0.199034266818493,0,0,0,0.414251545071004,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0.162137619091711,0,0.219550115291051,0.134206418760372,0.841159794256509,0.205809224758569,0,0,0.639864751605702,0.928946687441754,0.257734922644187,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,1.15289268306808,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.995706366271836,0.379335801906163,0.913988100877831,1.1270773567308,0.610953983535943,0.775809948670503,1.33258057791605,1.26473074248515,1.18088118383682,1.09899109488962,0.740382983530803,0,0.333690211432188,0.982794975566015,0.449724224769707,0.202860121388503,0.482354319504834,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0.195133647857799,0,0,0,0,0,0.867894351489069,0,0,0,0.275936746304732,0.80275294993896,0.820481806145422,0,0,2.52406575533005,2.34263246577983,4.09304455692318,4.06246956519338,3.56477878531831,5.09537755419898,2.02405350837447,6.42962887404886,3.95287777946523,0,0.283880170416537,0,0,0,0,0.485561272309963,0.604647113929502,0.754420319023592,0.295301892880773,2.15204603560749,1.55056975900933,2.90826983582004,1.42598951353889,0.316036757935816,1.05418608574999,0,10.8940673841212,0.720244376125241,1.4229455216103,3.64372959553707,4.96552654198366,3.38900753443934,3.9491764944509,3.34911444026059,0,0,0.661585194164886,0,0.161464426695906,0.0603129249281559,0,0,0.291480836629851,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0.203319467126849,0.324016022465404,0,1.31017538247707,0.809186078308924,0.909188012978695,0,0.777689839750757,0,0,0.149516546043979,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0.501572104035363,0,0.920650473014354,0,0,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0.51776031175182,0.415149390336707,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.206035057238894,0.962757628775446,0,0,0,0.280924522409647,0.320125762024346,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.436039249896986,0.282328141245992,0.25384382367503,0.365855945745545,0.263069711437843,0.271608227691724,0,0.474540072496697,0.886540341380071,0,0.309873682371932,0.192906610981141,0,0,0,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@LOC100047004,p3@Stk32a | |||
}} |
Revision as of 16:12, 13 September 2013
Short description: | p3@LOC100047004, p3@Stk32a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC100047004_5end, CAGE_peak_3_at_Stk32a_5end |
Coexpression cluster: | NA |
Association with transcript: | -158bp_to_ENSMUST00000045477, NM_178749, uc008eue.1, uc012bcj.1_5end |
EntrezGene: | 100047004,269019 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 4.83e-19 | 9 |
neuron | 4.14e-08 | 33 |
neuronal stem cell | 4.14e-08 | 33 |
neuroblast | 4.14e-08 | 33 |
electrically signaling cell | 4.14e-08 | 33 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 4.83e-19 | 9 |
diencephalon | 3.07e-16 | 10 |
future diencephalon | 3.07e-16 | 10 |
peripheral nervous system | 3.27e-15 | 11 |
central nervous system | 2.04e-13 | 73 |
pituitary gland | 5.89e-13 | 8 |
gland of diencephalon | 5.89e-13 | 8 |
neuroendocrine gland | 5.89e-13 | 8 |
nervous system | 6.99e-13 | 75 |
ectoderm-derived structure | 8.87e-11 | 95 |
ectoderm | 8.87e-11 | 95 |
presumptive ectoderm | 8.87e-11 | 95 |
neurectoderm | 4.16e-09 | 64 |
neural plate | 4.16e-09 | 64 |
presumptive neural plate | 4.16e-09 | 64 |
parasympathetic nervous system | 1.35e-07 | 3 |
neural tube | 2.02e-07 | 52 |
neural rod | 2.02e-07 | 52 |
future spinal cord | 2.02e-07 | 52 |
neural keel | 2.02e-07 | 52 |
sympathetic nervous system | 2.20e-07 | 3 |
ecto-epithelium | 2.27e-07 | 73 |
neural crest-derived structure | 3.07e-07 | 3 |
neural crest | 3.07e-07 | 3 |
enteric nervous system | 3.07e-07 | 3 |
vagal neural crest | 3.07e-07 | 3 |
neural fold | 3.07e-07 | 3 |
structure with developmental contribution from neural crest | 4.56e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.