FFCP PHASE1:Mm9::chr2:165618836..165618862,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=34|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:165618836..165618862,-|id=chr2:165618836..165618862,-|ontology_enrichment_celltype=CL:0000838!1.72e-34!12;CL:0000084!6.86e-32!11;CL:0000827!6.86e-32!11;CL:0000542!1.18e-31!13;CL:0000051!1.18e-31!13;CL:0000791!2.14e-26!9;CL:0000789!2.14e-26!9;CL:0002420!2.14e-26!9;CL:0002419!2.14e-26!9;CL:0000790!2.14e-26!9;CL:0000988!1.26e-24!32;CL:0002032!1.26e-24!32;CL:0000037!1.26e-24!32;CL:0000566!1.26e-24!32;CL:0000837!1.26e-24!32;CL:0000738!1.21e-23!17;CL:0002087!1.21e-23!17;CL:0000624!1.56e-23!8;CL:0000893!9.50e-18!6;CL:0002489!9.50e-18!6;CL:0000898!9.50e-18!6;CL:0000809!9.50e-18!6;CL:0000810!9.50e-18!6;CL:0000895!9.50e-18!6;CL:0000808!9.50e-18!6;CL:0000894!9.50e-18!6;CL:0000806!9.50e-18!6;CL:0000807!9.50e-18!6;CL:0000805!9.50e-18!6;CL:0002425!9.50e-18!6;CL:0002436!9.50e-18!6;CL:0002427!9.50e-18!6;CL:0002428!9.50e-18!6;CL:0002429!9.50e-18!6;CL:0002433!9.50e-18!6;CL:0002431!9.50e-18!6;CL:0002432!9.50e-18!6;CL:0002320!5.05e-16!46;CL:0000134!5.05e-16!46;CL:0002031!2.62e-15!25;CL:0000219!4.12e-13!54;CL:0000063!4.52e-10!66;CL:0000034!7.04e-09!97|ontology_enrichment_celltype_v019_2=CL:0000791,1.28e-21,9;CL:0000789,1.28e-21,9;CL:0002420,1.28e-21,9;CL:0002419,1.28e-21,9;CL:0000790,1.28e-21,9;CL:0000084,1.01e-17,11;CL:0000827,1.01e-17,11;CL:0000838,2.93e-16,12;CL:0000624,5.96e-16,8;CL:0000988,2.73e-15,32;CL:0002032,2.73e-15,32;CL:0000037,2.73e-15,32;CL:0000837,2.73e-15,32;CL:0000542,5.09e-15,13;CL:0000051,5.09e-15,13;CL:0000738,1.64e-11,17;CL:0002087,1.64e-11,17;CL:0002320,1.74e-10,46;CL:0000134,1.74e-10,46;CL:0000034,2.81e-09,97;CL:0000815,5.27e-09,1;CL:0000792,5.27e-09,1;CL:0000625,6.33e-09,1;CL:0000219,7.51e-09,54;CL:0002031,7.70e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!5.05e-16!46;UBERON:0002370!5.92e-11!23;UBERON:0000974!5.92e-11!23;UBERON:0004807!5.92e-11!23;UBERON:0005058!5.92e-11!23;UBERON:0003351!5.92e-11!23;UBERON:0009113!5.92e-11!23;UBERON:0003295!5.92e-11!23;UBERON:0009722!5.92e-11!23;UBERON:0005562!5.92e-11!23;UBERON:0007690!5.92e-11!23;UBERON:0006562!2.01e-10!24;UBERON:0003408!2.01e-10!24;UBERON:0001557!2.01e-10!24;UBERON:0001042!2.01e-10!24;UBERON:0008814!2.01e-10!24;UBERON:0009145!2.01e-10!24;UBERON:0000072!4.52e-09!27;UBERON:0004177!2.52e-08!29;UBERON:0002193!8.75e-08!48;UBERON:0002390!3.99e-07!45;UBERON:0003061!3.99e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.74e-10,46|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,2.956563165185,3.04283884218592,0.171217968225505,0.0797721589953364,0.684802919724823,0.174840804837995,0,0,0,0,0,0,0,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.539109069169,4.19931911695385,5.59108999121485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4371527591889,24.0716497996692,13.5435974328335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:165618836..165618862,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=34 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:165618836..165618862,- | |||
|id=chr2:165618836..165618862,- | |||
|ontology_enrichment_celltype=CL:0000838!1.72e-34!12;CL:0000084!6.86e-32!11;CL:0000827!6.86e-32!11;CL:0000542!1.18e-31!13;CL:0000051!1.18e-31!13;CL:0000791!2.14e-26!9;CL:0000789!2.14e-26!9;CL:0002420!2.14e-26!9;CL:0002419!2.14e-26!9;CL:0000790!2.14e-26!9;CL:0000988!1.26e-24!32;CL:0002032!1.26e-24!32;CL:0000037!1.26e-24!32;CL:0000566!1.26e-24!32;CL:0000837!1.26e-24!32;CL:0000738!1.21e-23!17;CL:0002087!1.21e-23!17;CL:0000624!1.56e-23!8;CL:0000893!9.50e-18!6;CL:0002489!9.50e-18!6;CL:0000898!9.50e-18!6;CL:0000809!9.50e-18!6;CL:0000810!9.50e-18!6;CL:0000895!9.50e-18!6;CL:0000808!9.50e-18!6;CL:0000894!9.50e-18!6;CL:0000806!9.50e-18!6;CL:0000807!9.50e-18!6;CL:0000805!9.50e-18!6;CL:0002425!9.50e-18!6;CL:0002436!9.50e-18!6;CL:0002427!9.50e-18!6;CL:0002428!9.50e-18!6;CL:0002429!9.50e-18!6;CL:0002433!9.50e-18!6;CL:0002431!9.50e-18!6;CL:0002432!9.50e-18!6;CL:0002320!5.05e-16!46;CL:0000134!5.05e-16!46;CL:0002031!2.62e-15!25;CL:0000219!4.12e-13!54;CL:0000063!4.52e-10!66;CL:0000034!7.04e-09!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.28e-21,9;CL:0000789,1.28e-21,9;CL:0002420,1.28e-21,9;CL:0002419,1.28e-21,9;CL:0000790,1.28e-21,9;CL:0000084,1.01e-17,11;CL:0000827,1.01e-17,11;CL:0000838,2.93e-16,12;CL:0000624,5.96e-16,8;CL:0000988,2.73e-15,32;CL:0002032,2.73e-15,32;CL:0000037,2.73e-15,32;CL:0000837,2.73e-15,32;CL:0000542,5.09e-15,13;CL:0000051,5.09e-15,13;CL:0000738,1.64e-11,17;CL:0002087,1.64e-11,17;CL:0002320,1.74e-10,46;CL:0000134,1.74e-10,46;CL:0000034,2.81e-09,97;CL:0000815,5.27e-09,1;CL:0000792,5.27e-09,1;CL:0000625,6.33e-09,1;CL:0000219,7.51e-09,54;CL:0002031,7.70e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!5.05e-16!46;UBERON:0002370!5.92e-11!23;UBERON:0000974!5.92e-11!23;UBERON:0004807!5.92e-11!23;UBERON:0005058!5.92e-11!23;UBERON:0003351!5.92e-11!23;UBERON:0009113!5.92e-11!23;UBERON:0003295!5.92e-11!23;UBERON:0009722!5.92e-11!23;UBERON:0005562!5.92e-11!23;UBERON:0007690!5.92e-11!23;UBERON:0006562!2.01e-10!24;UBERON:0003408!2.01e-10!24;UBERON:0001557!2.01e-10!24;UBERON:0001042!2.01e-10!24;UBERON:0008814!2.01e-10!24;UBERON:0009145!2.01e-10!24;UBERON:0000072!4.52e-09!27;UBERON:0004177!2.52e-08!29;UBERON:0002193!8.75e-08!48;UBERON:0002390!3.99e-07!45;UBERON:0003061!3.99e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.74e-10,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.80772652818207,2.956563165185,3.04283884218592,0.171217968225505,0.0797721589953364,0.684802919724823,0.174840804837995,0,0,0,0,0,0,0,0.198581902401771,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.539109069169,4.19931911695385,5.59108999121485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.4371527591889,24.0716497996692,13.5435974328335,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0.147689527174577,0.100966449948148,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:165618836..165618862,- | |||
}} |
Revision as of 22:56, 13 September 2013
Short description: | p@chr2:165618836..165618862, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:165618836..165618862, - |
Coexpression cluster: | MCL_coexpression_mm9:34 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.28e-21 | 9 |
alpha-beta T cell | 1.28e-21 | 9 |
immature T cell | 1.28e-21 | 9 |
mature T cell | 1.28e-21 | 9 |
immature alpha-beta T cell | 1.28e-21 | 9 |
T cell | 1.01e-17 | 11 |
pro-T cell | 1.01e-17 | 11 |
lymphoid lineage restricted progenitor cell | 2.93e-16 | 12 |
CD4-positive, alpha-beta T cell | 5.96e-16 | 8 |
hematopoietic cell | 2.73e-15 | 32 |
hematopoietic oligopotent progenitor cell | 2.73e-15 | 32 |
hematopoietic stem cell | 2.73e-15 | 32 |
hematopoietic multipotent progenitor cell | 2.73e-15 | 32 |
lymphocyte | 5.09e-15 | 13 |
common lymphoid progenitor | 5.09e-15 | 13 |
leukocyte | 1.64e-11 | 17 |
nongranular leukocyte | 1.64e-11 | 17 |
connective tissue cell | 1.74e-10 | 46 |
mesenchymal cell | 1.74e-10 | 46 |
stem cell | 2.81e-09 | 97 |
regulatory T cell | 5.27e-09 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.27e-09 | 1 |
CD8-positive, alpha-beta T cell | 6.33e-09 | 1 |
motile cell | 7.51e-09 | 54 |
hematopoietic lineage restricted progenitor cell | 7.70e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.74e-10 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.