FFCP PHASE1:Mm9::chr17:34256262..34256285,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=434|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:34256262..34256285,-|id=chr17:34256262..34256285,-|ontology_enrichment_celltype=CL:0000548!2.24e-29!115;CL:0000004!2.24e-29!115;CL:0000255!2.24e-29!115;CL:0000144!1.07e-28!121;CL:0000012!1.07e-28!121;CL:0002371!3.85e-27!118;CL:0000063!6.22e-20!66;CL:0000034!3.94e-18!97;CL:0000219!8.24e-16!54;CL:0000723!3.07e-15!91;CL:0000048!3.07e-15!91;CL:0002320!2.67e-13!46;CL:0000134!2.67e-13!46;CL:0002321!1.01e-12!70;CL:0000220!1.01e-12!70;CL:0000988!5.61e-10!32;CL:0002032!5.61e-10!32;CL:0000037!5.61e-10!32;CL:0000566!5.61e-10!32;CL:0000837!5.61e-10!32;CL:0002031!1.30e-09!25;CL:0000066!1.41e-07!25;CL:0000738!1.92e-07!17;CL:0002087!1.92e-07!17;CL:0000223!6.55e-07!20;CL:0000055!6.89e-07!50|ontology_enrichment_celltype_v019_2=CL:0000034,3.94e-18,97;CL:0000219,8.24e-16,54;CL:0000723,3.07e-15,91;CL:0000048,3.07e-15,91;CL:0002320,2.67e-13,46;CL:0000134,2.67e-13,46;CL:0002321,1.01e-12,70;CL:0000988,5.61e-10,32;CL:0002032,5.61e-10,32;CL:0000037,5.61e-10,32;CL:0000837,5.61e-10,32;CL:0002031,1.30e-09,25;CL:0000066,1.41e-07,25;CL:0000738,1.92e-07,17;CL:0002087,1.92e-07,17;CL:0000223,6.55e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.67e-13!46;UBERON:0002193!8.84e-11!48;UBERON:0002390!1.10e-10!45;UBERON:0003061!1.10e-10!45;UBERON:0000072!5.34e-08!27;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0003408!2.23e-07!24;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.67e-13,46;UBERON:0002193,8.84e-11,48;UBERON:0002405,8.84e-11,48;UBERON:0002390,1.10e-10,45;UBERON:0003061,1.10e-10,45;UBERON:0000077,4.08e-08,35;UBERON:0000072,5.34e-08,27;UBERON:0002370,1.28e-07,23;UBERON:0000974,1.28e-07,23;UBERON:0004807,1.28e-07,23;UBERON:0005058,1.28e-07,23;UBERON:0003351,1.28e-07,23;UBERON:0009113,1.28e-07,23;UBERON:0003295,1.28e-07,23;UBERON:0009722,1.28e-07,23;UBERON:0005562,1.28e-07,23;UBERON:0007690,1.28e-07,23;UBERON:0003408,2.23e-07,24;UBERON:0006562,6.25e-07,24;UBERON:0001557,6.25e-07,24;UBERON:0001042,6.25e-07,24;UBERON:0008814,6.25e-07,24;UBERON:0009145,6.25e-07,24|phase1_expression=48.8453983669622,128.422950011285,128.764784747239,157.281389879552,178.819775590846,80.2462919738833,76.6249461153324,100.457945637546,520.35511707256,651.167512227786,77.9041755426048,90.8604890956882,98.6116204403745,99.484417952819,52.298232605059,42.5198061518634,53.1667027377391,86.7520954735154,80.7604013937801,87.8486579221923,60.6358658777128,49.9433484540453,39.4411681599792,48.9576813747824,49.5524047105087,99.9163617560135,84.4293512471787,72.8292766478305,34.58426234106,45.3654233567875,35.4768817048488,124.466011998088,100.255560376285,110.937176710807,75.9679759945852,42.2235999210571,106.780573325219,31.808403936005,33.5974198145234,34.0290433582969,51.7643709467293,40.2996836125483,40.2973593015858,67.606591252885,62.5495665624405,64.2413632565885,115.011527619162,56.4685155025357,77.3295363225341,64.7451563917364,66.4935502720472,80.5014360443841,222.983083450732,361.955708863661,324.330516172478,109.078000879242,85.6734985416883,108.291139378263,72.429292987736,94.1603943104219,66.5522973681488,102.669893216947,81.8151212422248,125.536010560755,127.56376077114,125.75498034546,117.143643212696,108.349562100678,71.6495221051581,82.488628320663,79.7131603521738,43.4189496293781,46.8241306817421,59.2855468200378,62.4912471038901,54.2339084099912,42.9451935897616,44.179818977475,37.0191745147547,74.6476388552897,76.8496206260241,69.2814782840491,41.5982668512058,30.3891809417107,37.1299742097649,41.8372591372608,41.9996458357354,47.5318586854516,93.5218487664823,90.8370152483562,244.935492952918,45.6024654800135,245.469651468498,52.8909127805061,42.8852435515462,58.691522209751,48.0319916850591,69.5355716118476,58.1920650310426,65.0144817099026,50.2811008602749,75.7126216744475,78.9896243090602,71.1066703153331,77.2873016410034,83.3553957413074,90.4888756576462,46.0161035267812,84.413750068978,59.0799713478003,45.1061849591953,38.3626502673298,31.8249386213361,30.4459733916298,34.4534911907615,48.3816376619251,82.3159242555465,67.8170983954386,53.9612436689423,38.9858108373256,57.4187947997023,56.730404616821,59.6453635897991,29.8636412951778,25.1336048176146,57.7332944771417,91.658570247029,67.1891058712617,72.9383103399391,31.1564529962031,37.5150494311274,62.8271760564322,30.2454317134561,30.174423964979,31.7915708176127,34.0706652442291,31.0610059743465,45.4085442726839,45.9955420349288,52.400022115732,54.910826930261,34.7152177694544,44.2952839321159,33.4564695595287,38.6447315179542,46.6333941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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=434 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:34256262..34256285,- | |||
|id=chr17:34256262..34256285,- | |||
|ontology_enrichment_celltype=CL:0000548!2.24e-29!115;CL:0000004!2.24e-29!115;CL:0000255!2.24e-29!115;CL:0000144!1.07e-28!121;CL:0000012!1.07e-28!121;CL:0002371!3.85e-27!118;CL:0000063!6.22e-20!66;CL:0000034!3.94e-18!97;CL:0000219!8.24e-16!54;CL:0000723!3.07e-15!91;CL:0000048!3.07e-15!91;CL:0002320!2.67e-13!46;CL:0000134!2.67e-13!46;CL:0002321!1.01e-12!70;CL:0000220!1.01e-12!70;CL:0000988!5.61e-10!32;CL:0002032!5.61e-10!32;CL:0000037!5.61e-10!32;CL:0000566!5.61e-10!32;CL:0000837!5.61e-10!32;CL:0002031!1.30e-09!25;CL:0000066!1.41e-07!25;CL:0000738!1.92e-07!17;CL:0002087!1.92e-07!17;CL:0000223!6.55e-07!20;CL:0000055!6.89e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.94e-18,97;CL:0000219,8.24e-16,54;CL:0000723,3.07e-15,91;CL:0000048,3.07e-15,91;CL:0002320,2.67e-13,46;CL:0000134,2.67e-13,46;CL:0002321,1.01e-12,70;CL:0000988,5.61e-10,32;CL:0002032,5.61e-10,32;CL:0000037,5.61e-10,32;CL:0000837,5.61e-10,32;CL:0002031,1.30e-09,25;CL:0000066,1.41e-07,25;CL:0000738,1.92e-07,17;CL:0002087,1.92e-07,17;CL:0000223,6.55e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.67e-13!46;UBERON:0002193!8.84e-11!48;UBERON:0002390!1.10e-10!45;UBERON:0003061!1.10e-10!45;UBERON:0000072!5.34e-08!27;UBERON:0002370!1.28e-07!23;UBERON:0000974!1.28e-07!23;UBERON:0004807!1.28e-07!23;UBERON:0005058!1.28e-07!23;UBERON:0003351!1.28e-07!23;UBERON:0009113!1.28e-07!23;UBERON:0003295!1.28e-07!23;UBERON:0009722!1.28e-07!23;UBERON:0005562!1.28e-07!23;UBERON:0007690!1.28e-07!23;UBERON:0003408!2.23e-07!24;UBERON:0006562!6.25e-07!24;UBERON:0001557!6.25e-07!24;UBERON:0001042!6.25e-07!24;UBERON:0008814!6.25e-07!24;UBERON:0009145!6.25e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.67e-13,46;UBERON:0002193,8.84e-11,48;UBERON:0002405,8.84e-11,48;UBERON:0002390,1.10e-10,45;UBERON:0003061,1.10e-10,45;UBERON:0000077,4.08e-08,35;UBERON:0000072,5.34e-08,27;UBERON:0002370,1.28e-07,23;UBERON:0000974,1.28e-07,23;UBERON:0004807,1.28e-07,23;UBERON:0005058,1.28e-07,23;UBERON:0003351,1.28e-07,23;UBERON:0009113,1.28e-07,23;UBERON:0003295,1.28e-07,23;UBERON:0009722,1.28e-07,23;UBERON:0005562,1.28e-07,23;UBERON:0007690,1.28e-07,23;UBERON:0003408,2.23e-07,24;UBERON:0006562,6.25e-07,24;UBERON:0001557,6.25e-07,24;UBERON:0001042,6.25e-07,24;UBERON:0008814,6.25e-07,24;UBERON:0009145,6.25e-07,24 | |||
|phase1_expression=48.8453983669622,128.422950011285,128.764784747239,157.281389879552,178.819775590846,80.2462919738833,76.6249461153324,100.457945637546,520.35511707256,651.167512227786,77.9041755426048,90.8604890956882,98.6116204403745,99.484417952819,52.298232605059,42.5198061518634,53.1667027377391,86.7520954735154,80.7604013937801,87.8486579221923,60.6358658777128,49.9433484540453,39.4411681599792,48.9576813747824,49.5524047105087,99.9163617560135,84.4293512471787,72.8292766478305,34.58426234106,45.3654233567875,35.4768817048488,124.466011998088,100.255560376285,110.937176710807,75.9679759945852,42.2235999210571,106.780573325219,31.808403936005,33.5974198145234,34.0290433582969,51.7643709467293,40.2996836125483,40.2973593015858,67.606591252885,62.5495665624405,64.2413632565885,115.011527619162,56.4685155025357,77.3295363225341,64.7451563917364,66.4935502720472,80.5014360443841,222.983083450732,361.955708863661,324.330516172478,109.078000879242,85.6734985416883,108.291139378263,72.429292987736,94.1603943104219,66.5522973681488,102.669893216947,81.8151212422248,125.536010560755,127.56376077114,125.75498034546,117.143643212696,108.349562100678,71.6495221051581,82.488628320663,79.7131603521738,43.4189496293781,46.8241306817421,59.2855468200378,62.4912471038901,54.2339084099912,42.9451935897616,44.179818977475,37.0191745147547,74.6476388552897,76.8496206260241,69.2814782840491,41.5982668512058,30.3891809417107,37.1299742097649,41.8372591372608,41.9996458357354,47.5318586854516,93.5218487664823,90.8370152483562,244.935492952918,45.6024654800135,245.469651468498,52.8909127805061,42.8852435515462,58.691522209751,48.0319916850591,69.5355716118476,58.1920650310426,65.0144817099026,50.2811008602749,75.7126216744475,78.9896243090602,71.1066703153331,77.2873016410034,83.3553957413074,90.4888756576462,46.0161035267812,84.413750068978,59.0799713478003,45.1061849591953,38.3626502673298,31.8249386213361,30.4459733916298,34.4534911907615,48.3816376619251,82.3159242555465,67.8170983954386,53.9612436689423,38.9858108373256,57.4187947997023,56.730404616821,59.6453635897991,29.8636412951778,25.1336048176146,57.7332944771417,91.658570247029,67.1891058712617,72.9383103399391,31.1564529962031,37.5150494311274,62.8271760564322,30.2454317134561,30.174423964979,31.7915708176127,34.0706652442291,31.0610059743465,45.4085442726839,45.9955420349288,52.400022115732,54.910826930261,34.7152177694544,44.2952839321159,33.4564695595287,38.6447315179542,46.6333941836853,41.7909691536391,58.4669617870175,81.2691333356815,69.4019314215897,53.1372394975126,42.9623635558047,47.2680323683516,50.4965641457142,49.1819306014985,47.7682240364384,49.8571362992397,54.0430604940902,65.0734413615907,36.2470101937128,36.3515392970699,30.9706745712946,32.4340287751738,24.5955289684255,24.3742038362058,23.2533944750408,29.5100741539581,22.4189457344965,27.1523752357243,27.4159665012089,29.5901154842373,34.5031970323784,31.8347667172023,25.7676324019914,36.8007409987223,61.0224351409157,55.8407743242619,45.2210468994661,48.8430093725686,47.144044387669,44.201539233478,36.7064014814483,32.6895724451959,36.3330945874988,52.1981967698963,30.963403488114,30.6628954736329,36.2100779114894,38.0179969882284,66.5126362404124,46.0374046233099,46.9973404880307,76.625831985045,45.2424109934526,69.8787961173099,48.4690160271848,46.5485969202302,38.8552442192365,42.8111356331222,46.6448067615543,44.1166425234263,36.7723548486966,49.804041350641,50.5540670319765,43.0464199297915,51.0436995113618,47.4692684049097,39.7942313591488,29.7912246584261,29.0573098825319,31.1299635408068,30.7508782770651,50.3188722845741,29.7712758134803,37.1324831006327,44.4538825186917,43.4141740723027,39.0779252304327,65.5873825091447,41.1196363541952,57.6896016604772,43.1152517868978,40.3667227056224,40.3690080434776,48.3228590998608,72.9799842988168,42.5614889086716,44.5144026194038,60.9117216271601,53.9110305414778,44.8980952851329,50.9164686206921,147.775458260487,77.7785127860755,43.2752560256752,42.7701956772335,30.3440615076927,29.3029216480508,68.5248071674503,34.3360460997947,70.6738411492415,77.3068713707344,75.6136126042124,82.683204091583,72.6323677508605,83.5075765827056,80.1525189316291,75.1097554832072,81.8245700349304,56.8738730066598,59.3309556170563,59.295846021196,36.8124528139082,61.6988259917283,50.4431525691859,49.5272497756162,35.9765032788054,35.2691499143529,41.637566896189,37.8145231971031,35.1462478708781,32.354501923498,25.3113138653152,35.0800801308756,43.2216295157495,41.2542172992747,54.4703369206061,42.8545403794518,55.2361579752362,51.2265513725506,53.7340907936089,43.3436226773031,42.9472943771536,56.0215506370863,114.754465243154,90.0286301171236,59.3221390767848,33.1421368412375,32.7772786192688,40.4096597018644,39.5122458650382,35.7827161444234,47.8028572072955,35.9725085900389,50.7486515969622,52.2158775946953,47.2246044792765,42.1945343690508,59.598683286367,52.3902016642937,74.9604876272902,107.342763932246,82.0907844398277,47.7335309007557,52.986278924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| |||
|short_description=p@chr17:34256262..34256285,- | |||
}} |
Revision as of 14:11, 13 September 2013
Short description: | p@chr17:34256262..34256285, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:34256262..34256285, - |
Coexpression cluster: | MCL_coexpression_mm9:434 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.94e-18 | 97 |
motile cell | 8.24e-16 | 54 |
somatic stem cell | 3.07e-15 | 91 |
multi fate stem cell | 3.07e-15 | 91 |
connective tissue cell | 2.67e-13 | 46 |
mesenchymal cell | 2.67e-13 | 46 |
embryonic cell | 1.01e-12 | 70 |
hematopoietic cell | 5.61e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.61e-10 | 32 |
hematopoietic stem cell | 5.61e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.61e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 1.30e-09 | 25 |
epithelial cell | 1.41e-07 | 25 |
leukocyte | 1.92e-07 | 17 |
nongranular leukocyte | 1.92e-07 | 17 |
endodermal cell | 6.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.67e-13 | 46 |
hemolymphoid system | 8.84e-11 | 48 |
immune system | 8.84e-11 | 48 |
hematopoietic system | 1.10e-10 | 45 |
blood island | 1.10e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 4.08e-08 | 35 |
segment of respiratory tract | 5.34e-08 | 27 |
thymus | 1.28e-07 | 23 |
neck | 1.28e-07 | 23 |
respiratory system epithelium | 1.28e-07 | 23 |
hemolymphoid system gland | 1.28e-07 | 23 |
pharyngeal epithelium | 1.28e-07 | 23 |
thymic region | 1.28e-07 | 23 |
pharyngeal gland | 1.28e-07 | 23 |
entire pharyngeal arch endoderm | 1.28e-07 | 23 |
thymus primordium | 1.28e-07 | 23 |
early pharyngeal endoderm | 1.28e-07 | 23 |
gland of gut | 2.23e-07 | 24 |
pharynx | 6.25e-07 | 24 |
upper respiratory tract | 6.25e-07 | 24 |
chordate pharynx | 6.25e-07 | 24 |
pharyngeal arch system | 6.25e-07 | 24 |
pharyngeal region of foregut | 6.25e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.