FFCP PHASE1:Hg19::chr6:30525064..30525098,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80742 | |EntrezGene=80742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21149 | |HGNC=21149 | ||
|TSSclassifier=S | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000481741,ENST00000498336_5end | |association_with_transcript=0bp_to_ENST00000481741,ENST00000498336_5end |
Revision as of 04:53, 10 July 2013
Short description: | p1@PRR3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRR3_5end |
Coexpression cluster: | C4588_neuroblastoma_neuroectodermal_osteosarcoma_medulloblastoma_acute_mesothelioma_small |
Association with transcript: | 0bp_to_ENST00000481741, ENST00000498336_5end |
EntrezGene: | PRR3 |
HGNC: | 21149 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PRR3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 2.62e-14 | 89 |
central nervous system | 4.17e-12 | 81 |
neurectoderm | 1.57e-11 | 86 |
brain | 8.24e-11 | 68 |
future brain | 8.24e-11 | 68 |
neural plate | 9.34e-10 | 82 |
presumptive neural plate | 9.34e-10 | 82 |
pre-chordal neural plate | 1.42e-09 | 61 |
organ system subdivision | 2.25e-09 | 223 |
regional part of nervous system | 1.07e-08 | 53 |
Showing 1 to 10 of 26 entries
Ontology term | p-value | n |
---|---|---|
cancer | 2.31e-28 | 235 |
disease of cellular proliferation | 6.24e-28 | 239 |
hematologic cancer | 6.40e-14 | 51 |
immune system cancer | 6.40e-14 | 51 |
cell type cancer | 7.33e-14 | 143 |
organ system cancer | 3.88e-12 | 137 |
leukemia | 3.88e-12 | 39 |
myeloid leukemia | 3.46e-09 | 31 |
carcinoma | 2.93e-08 | 106 |
germ cell and embryonal cancer | 5.10e-07 | 22 |
Showing 1 to 10 of 11 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.