FFCP PHASE1:Hg19::chr1:47469854..47469863,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=260293|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=20244|TSSclassifier=W|UniProt=|association_with_transcript=-48bp_to_uc001cqs.2_5end|coexpression_cluster_id=C81|description=CAGE_peak_6_at_CYP4X1_5end|id=chr1:47469854..47469863,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;8.82e-14;2!UBERON:0008947;2.27e-08;29|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006562!4.10e-11!11;UBERON:0000065!1.79e-10!53;UBERON:0007023!4.63e-10!115;UBERON:0003127!3.64e-09!2;UBERON:0001042!8.81e-09!10;UBERON:0009145!8.81e-09!10;UBERON:0000341!9.89e-09!2;UBERON:0001004!4.96e-08!72;UBERON:0005178!1.71e-07!34;UBERON:0002224!1.71e-07!34;UBERON:0005181!3.12e-07!35|ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0002171;8.64e-26;1!UBERON:0006518;8.64e-26;1!UBERON:0008949;8.64e-26;1!UBERON:0000101;8.64e-26;1!UBERON:0002167;8.64e-26;1!UBERON:0003126;3.41e-15;7!UBERON:0001005;3.41e-15;7!UBERON:0000341;7.30e-14;2!UBERON:0001896;1.60e-09;3!UBERON:0005290;1.60e-09;3!UBERON:0007196;1.33e-07;15!UBERON:0001558;1.33e-07;15|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.88e-50,2;UBERON:0002171,7.62e-26,1;UBERON:0006518,7.62e-26,1;UBERON:0008949,7.62e-26,1;UBERON:0000101,7.62e-26,1;UBERON:0002167,7.62e-26,1;UBERON:0003126,3.06e-15,7;UBERON:0001005,3.06e-15,7;UBERON:0000341,7.30e-14,2;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0007023,6.48e-08,114;UBERON:0007196,1.27e-07,15;UBERON:0001558,1.27e-07,15;UBERON:0005178,3.02e-07,34;UBERON:0002224,3.02e-07,34;UBERON:0005181,4.68e-07,35|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0.219267951258557,0.164230914106418,0.484945082442097,0,0.677942222341597,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.640724475406168,0.471612915298998,1.65695622138878,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,1.33114861844223,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0.23806443146374,0.129177819672012,0.124149428591716,0.448527450322454,0,0,0.217716747896961,0.342233301085281,0.404112318087525,8.03288700397975,1.99596213927608,0,0,0,0,0,0,0,0,0,0|short_description=p6@CYP4X1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=260293 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20244 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-48bp_to_uc001cqs.2_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_6_at_CYP4X1_5end | |||
|id=chr1:47469854..47469863,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.82e-14;2!UBERON:0008947;2.27e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!4.10e-11!11;UBERON:0000065!1.79e-10!53;UBERON:0007023!4.63e-10!115;UBERON:0003127!3.64e-09!2;UBERON:0001042!8.81e-09!10;UBERON:0009145!8.81e-09!10;UBERON:0000341!9.89e-09!2;UBERON:0001004!4.96e-08!72;UBERON:0005178!1.71e-07!34;UBERON:0002224!1.71e-07!34;UBERON:0005181!3.12e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;2.74e-50;2!UBERON:0002171;8.64e-26;1!UBERON:0006518;8.64e-26;1!UBERON:0008949;8.64e-26;1!UBERON:0000101;8.64e-26;1!UBERON:0002167;8.64e-26;1!UBERON:0003126;3.41e-15;7!UBERON:0001005;3.41e-15;7!UBERON:0000341;7.30e-14;2!UBERON:0001896;1.60e-09;3!UBERON:0005290;1.60e-09;3!UBERON:0007196;1.33e-07;15!UBERON:0001558;1.33e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,1.88e-50,2;UBERON:0002171,7.62e-26,1;UBERON:0006518,7.62e-26,1;UBERON:0008949,7.62e-26,1;UBERON:0000101,7.62e-26,1;UBERON:0002167,7.62e-26,1;UBERON:0003126,3.06e-15,7;UBERON:0001005,3.06e-15,7;UBERON:0000341,7.30e-14,2;UBERON:0001896,1.67e-09,3;UBERON:0005290,1.67e-09,3;UBERON:0010096,1.67e-09,3;UBERON:0007023,6.48e-08,114;UBERON:0007196,1.27e-07,15;UBERON:0001558,1.27e-07,15;UBERON:0005178,3.02e-07,34;UBERON:0002224,3.02e-07,34;UBERON:0005181,4.68e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78608460693696,0,0,0,0,0,0,0,0,0,2.78947183551498,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0.341380344856499,0,0.945550727071745,0,0,0,0,0,0,0.110579259931225,0,0,0,0,1.00035336054936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0.219267951258557,0.164230914106418,0.484945082442097,0,0.677942222341597,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0.209205692624666,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.640724475406168,0.471612915298998,1.65695622138878,0,0.197611631897944,0,0,0,0,0,0,0.157054096250234,0,0,0,0,1.33114861844223,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0.23806443146374,0.129177819672012,0.124149428591716,0.448527450322454,0,0,0.217716747896961,0.342233301085281,0.404112318087525,8.03288700397975,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@CYP4X1 | |||
}} |
Revision as of 06:00, 12 September 2013
Short description: | p6@CYP4X1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_CYP4X1_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | -48bp_to_uc001cqs.2_5end |
EntrezGene: | CYP4X1 |
HGNC: | 20244 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 1.88e-50 | 2 |
lower lobe of right lung | 7.62e-26 | 1 |
right lung lobe | 7.62e-26 | 1 |
lower lobe of lung | 7.62e-26 | 1 |
lobe of lung | 7.62e-26 | 1 |
right lung | 7.62e-26 | 1 |
trachea | 3.06e-15 | 7 |
respiratory airway | 3.06e-15 | 7 |
throat | 7.30e-14 | 2 |
medulla oblongata | 1.67e-09 | 3 |
myelencephalon | 1.67e-09 | 3 |
future myelencephalon | 1.67e-09 | 3 |
adult organism | 6.48e-08 | 114 |
tracheobronchial tree | 1.27e-07 | 15 |
lower respiratory tract | 1.27e-07 | 15 |
thoracic cavity element | 3.02e-07 | 34 |
thoracic cavity | 3.02e-07 | 34 |
thoracic segment organ | 4.68e-07 | 35 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.