FFCP PHASE1:Hg19::chr1:101875843..101875867,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C36|description=CAGE_peak_at_chr1:101875843..101875867,-|id=chr1:101875843..101875867,-|ontology_enrichment_celltype=CL:0002139!1.78e-83!24;CL:0000115!3.63e-68!35;CL:0000071!1.88e-62!18;CL:0002546!1.88e-62!18;CL:0002078!3.09e-53!44;CL:1000413!5.41e-45!9;CL:0000213!5.45e-40!57;CL:0000215!5.45e-40!57;CL:0002544!1.11e-30!6;CL:0002543!1.76e-22!6;CL:0005020!3.14e-22!6;CL:0002138!3.14e-22!6;CL:0005022!3.14e-22!6;CL:0000945!4.85e-21!24;CL:0000826!4.85e-21!24;CL:0002618!1.17e-16!3;CL:0000222!1.25e-16!119;CL:0000076!7.53e-16!62;CL:0002545!1.80e-11!2;CL:0000838!1.04e-08!52;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0000817!3.82e-08!3;CL:0000946!6.08e-07!1;CL:0000786!6.08e-07!1;CL:0000980!6.08e-07!1|ontology_enrichment_celltype_v019=CL:0000945;6.31e-25;24!CL:0002139;1.07e-24;24!CL:0000115;3.20e-22;36!CL:0002138;1.71e-19;6!CL:0002543;5.26e-19;6!CL:0000946;1.25e-13;1!CL:0000786;1.25e-13;1!CL:0002078;1.50e-13;45!CL:0000213;2.05e-11;58!CL:0000215;2.05e-11;58!CL:0000071;3.47e-11;18!CL:0002262;1.32e-07;2!CL:1000398;1.32e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,8.35e-27,36;CL:0000945,5.99e-25,24;CL:0000826,5.99e-25,24;CL:0002139,9.92e-25,24;CL:0002078,2.90e-21,45;CL:0005020,1.82e-19,6;CL:0002138,1.82e-19,6;CL:0005022,1.82e-19,6;CL:0002543,3.63e-19,6;CL:0000213,2.75e-16,58;CL:0000215,2.75e-16,58;CL:0000946,7.55e-14,1;CL:0000786,7.55e-14,1;CL:0000980,7.55e-14,1;CL:0000838,3.14e-11,52;CL:0000071,3.20e-11,18;CL:0002546,3.20e-11,18;CL:0000542,5.25e-11,53;CL:0000051,5.25e-11,53;CL:0002262,1.28e-07,2;CL:1000398,1.28e-07,2;CL:0000785,1.45e-07,2;CL:0000955,1.45e-07,2;CL:0000818,1.45e-07,2;CL:0000954,1.45e-07,2;CL:0000816,1.45e-07,2;CL:0000222,2.87e-07,121|ontology_enrichment_development_v019=CL:0005022;1.71e-19;6!CL:0002546;3.47e-11;18!CL:0000954;1.87e-07;2|ontology_enrichment_disease=DOID:630!5.75e-07!1;DOID:0050177!5.75e-07!1;DOID:0050427!5.75e-07!1|ontology_enrichment_disease_v019=DOID:630;6.23e-14;1!DOID:0050177;6.23e-14;1!DOID:0050427;6.23e-14;1|ontology_enrichment_disease_v019_2=DOID:630,6.65e-14,1;DOID:0050177,6.65e-14,1;DOID:0050427,6.65e-14,1|ontology_enrichment_uberon=UBERON:0001986!1.88e-62!18;UBERON:0004638!1.88e-62!18;UBERON:0004852!1.88e-62!18;UBERON:0000487!1.62e-50!22;UBERON:0003915!5.41e-45!9;UBERON:0004700!5.41e-45!9;UBERON:0001917!5.41e-45!9;UBERON:0006914!4.54e-44!25;UBERON:0000055!3.56e-29!69;UBERON:0002049!6.82e-25!79;UBERON:0007798!6.82e-25!79;UBERON:0001981!4.99e-19!60;UBERON:0007500!4.99e-19!60;UBERON:0004537!4.99e-19!60;UBERON:0006965!4.99e-19!60;UBERON:0001473!1.25e-16!8;UBERON:0004536!1.25e-16!8;UBERON:0006558!1.25e-16!8;UBERON:0004535!1.43e-16!110;UBERON:0004872!2.80e-16!84;UBERON:0001009!5.22e-16!113;UBERON:0001638!6.38e-15!9;UBERON:0003920!6.38e-15!9;UBERON:0004582!6.38e-15!9;UBERON:0002465!2.93e-13!10;UBERON:0005800!1.80e-11!2;UBERON:0001515!1.80e-11!2;UBERON:0003914!1.60e-10!118;UBERON:0002066!3.37e-10!5;UBERON:0001637!1.73e-08!42;UBERON:0003509!1.73e-08!42;UBERON:0004572!1.73e-08!42;UBERON:0000947!2.17e-08!21;UBERON:0010191!2.17e-08!21;UBERON:0002106!1.09e-07!3;UBERON:0004854!1.09e-07!3;UBERON:0009034!1.09e-07!3;UBERON:0002095!1.09e-07!3;UBERON:0004782!1.09e-07!3;UBERON:0003281!1.09e-07!3;UBERON:0009664!1.09e-07!3;UBERON:0002296!1.09e-07!3;UBERON:0005602!1.09e-07!3;UBERON:0001179!1.09e-07!3;UBERON:0006293!1.09e-07!3;UBERON:0004111!2.10e-07!241;UBERON:0000477!7.05e-07!286|ontology_enrichment_uberon_v019=UBERON:0001473;8.79e-15;8!UBERON:0004536;8.79e-15;8!UBERON:0006558;8.79e-15;8!UBERON:0001638;6.93e-13;9!UBERON:0003920;6.93e-13;9!UBERON:0004582;6.93e-13;9!UBERON:0002465;6.03e-12;10!UBERON:0004638;3.47e-11;18!UBERON:0001986;3.47e-11;18!UBERON:0004852;3.47e-11;18!UBERON:0000487;3.39e-09;22!UBERON:0006914;4.06e-08;25!UBERON:0001281;1.32e-07;2!UBERON:0003497;1.32e-07;2!UBERON:0003909;1.32e-07;2!UBERON:0003835;1.32e-07;2!UBERON:0000055;1.33e-07;65|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.21e-15,8;UBERON:0004536,9.21e-15,8;UBERON:0006558,9.21e-15,8;UBERON:0001638,5.42e-13,9;UBERON:0003920,5.42e-13,9;UBERON:0004582,5.42e-13,9;UBERON:0002465,6.26e-12,10;UBERON:0004638,3.20e-11,18;UBERON:0001986,3.20e-11,18;UBERON:0004852,3.20e-11,18;UBERON:0000055,6.70e-11,68;UBERON:0002049,2.14e-09,78;UBERON:0007798,2.14e-09,78;UBERON:0000487,3.18e-09,22;UBERON:0006914,3.84e-08,25;UBERON:0001281,1.28e-07,2;UBERON:0003497,1.28e-07,2;UBERON:0003909,1.28e-07,2;UBERON:0003835,1.28e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.64134057479513,6.15754420874593,8.02849969399528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr1:101875843..101875867,- | |||
|id=chr1:101875843..101875867,- | |||
|ontology_enrichment_celltype=CL:0002139!1.78e-83!24;CL:0000115!3.63e-68!35;CL:0000071!1.88e-62!18;CL:0002546!1.88e-62!18;CL:0002078!3.09e-53!44;CL:1000413!5.41e-45!9;CL:0000213!5.45e-40!57;CL:0000215!5.45e-40!57;CL:0002544!1.11e-30!6;CL:0002543!1.76e-22!6;CL:0005020!3.14e-22!6;CL:0002138!3.14e-22!6;CL:0005022!3.14e-22!6;CL:0000945!4.85e-21!24;CL:0000826!4.85e-21!24;CL:0002618!1.17e-16!3;CL:0000222!1.25e-16!119;CL:0000076!7.53e-16!62;CL:0002545!1.80e-11!2;CL:0000838!1.04e-08!52;CL:0000542!1.64e-08!53;CL:0000051!1.64e-08!53;CL:0000817!3.82e-08!3;CL:0000946!6.08e-07!1;CL:0000786!6.08e-07!1;CL:0000980!6.08e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.31e-25;24!CL:0002139;1.07e-24;24!CL:0000115;3.20e-22;36!CL:0002138;1.71e-19;6!CL:0002543;5.26e-19;6!CL:0000946;1.25e-13;1!CL:0000786;1.25e-13;1!CL:0002078;1.50e-13;45!CL:0000213;2.05e-11;58!CL:0000215;2.05e-11;58!CL:0000071;3.47e-11;18!CL:0002262;1.32e-07;2!CL:1000398;1.32e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.35e-27,36;CL:0000945,5.99e-25,24;CL:0000826,5.99e-25,24;CL:0002139,9.92e-25,24;CL:0002078,2.90e-21,45;CL:0005020,1.82e-19,6;CL:0002138,1.82e-19,6;CL:0005022,1.82e-19,6;CL:0002543,3.63e-19,6;CL:0000213,2.75e-16,58;CL:0000215,2.75e-16,58;CL:0000946,7.55e-14,1;CL:0000786,7.55e-14,1;CL:0000980,7.55e-14,1;CL:0000838,3.14e-11,52;CL:0000071,3.20e-11,18;CL:0002546,3.20e-11,18;CL:0000542,5.25e-11,53;CL:0000051,5.25e-11,53;CL:0002262,1.28e-07,2;CL:1000398,1.28e-07,2;CL:0000785,1.45e-07,2;CL:0000955,1.45e-07,2;CL:0000818,1.45e-07,2;CL:0000954,1.45e-07,2;CL:0000816,1.45e-07,2;CL:0000222,2.87e-07,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.71e-19;6!CL:0002546;3.47e-11;18!CL:0000954;1.87e-07;2 | |||
|ontology_enrichment_disease=DOID:630!5.75e-07!1;DOID:0050177!5.75e-07!1;DOID:0050427!5.75e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;6.23e-14;1!DOID:0050177;6.23e-14;1!DOID:0050427;6.23e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.65e-14,1;DOID:0050177,6.65e-14,1;DOID:0050427,6.65e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.88e-62!18;UBERON:0004638!1.88e-62!18;UBERON:0004852!1.88e-62!18;UBERON:0000487!1.62e-50!22;UBERON:0003915!5.41e-45!9;UBERON:0004700!5.41e-45!9;UBERON:0001917!5.41e-45!9;UBERON:0006914!4.54e-44!25;UBERON:0000055!3.56e-29!69;UBERON:0002049!6.82e-25!79;UBERON:0007798!6.82e-25!79;UBERON:0001981!4.99e-19!60;UBERON:0007500!4.99e-19!60;UBERON:0004537!4.99e-19!60;UBERON:0006965!4.99e-19!60;UBERON:0001473!1.25e-16!8;UBERON:0004536!1.25e-16!8;UBERON:0006558!1.25e-16!8;UBERON:0004535!1.43e-16!110;UBERON:0004872!2.80e-16!84;UBERON:0001009!5.22e-16!113;UBERON:0001638!6.38e-15!9;UBERON:0003920!6.38e-15!9;UBERON:0004582!6.38e-15!9;UBERON:0002465!2.93e-13!10;UBERON:0005800!1.80e-11!2;UBERON:0001515!1.80e-11!2;UBERON:0003914!1.60e-10!118;UBERON:0002066!3.37e-10!5;UBERON:0001637!1.73e-08!42;UBERON:0003509!1.73e-08!42;UBERON:0004572!1.73e-08!42;UBERON:0000947!2.17e-08!21;UBERON:0010191!2.17e-08!21;UBERON:0002106!1.09e-07!3;UBERON:0004854!1.09e-07!3;UBERON:0009034!1.09e-07!3;UBERON:0002095!1.09e-07!3;UBERON:0004782!1.09e-07!3;UBERON:0003281!1.09e-07!3;UBERON:0009664!1.09e-07!3;UBERON:0002296!1.09e-07!3;UBERON:0005602!1.09e-07!3;UBERON:0001179!1.09e-07!3;UBERON:0006293!1.09e-07!3;UBERON:0004111!2.10e-07!241;UBERON:0000477!7.05e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.79e-15;8!UBERON:0004536;8.79e-15;8!UBERON:0006558;8.79e-15;8!UBERON:0001638;6.93e-13;9!UBERON:0003920;6.93e-13;9!UBERON:0004582;6.93e-13;9!UBERON:0002465;6.03e-12;10!UBERON:0004638;3.47e-11;18!UBERON:0001986;3.47e-11;18!UBERON:0004852;3.47e-11;18!UBERON:0000487;3.39e-09;22!UBERON:0006914;4.06e-08;25!UBERON:0001281;1.32e-07;2!UBERON:0003497;1.32e-07;2!UBERON:0003909;1.32e-07;2!UBERON:0003835;1.32e-07;2!UBERON:0000055;1.33e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,9.21e-15,8;UBERON:0004536,9.21e-15,8;UBERON:0006558,9.21e-15,8;UBERON:0001638,5.42e-13,9;UBERON:0003920,5.42e-13,9;UBERON:0004582,5.42e-13,9;UBERON:0002465,6.26e-12,10;UBERON:0004638,3.20e-11,18;UBERON:0001986,3.20e-11,18;UBERON:0004852,3.20e-11,18;UBERON:0000055,6.70e-11,68;UBERON:0002049,2.14e-09,78;UBERON:0007798,2.14e-09,78;UBERON:0000487,3.18e-09,22;UBERON:0006914,3.84e-08,25;UBERON:0001281,1.28e-07,2;UBERON:0003497,1.28e-07,2;UBERON:0003909,1.28e-07,2;UBERON:0003835,1.28e-07,2 | |||
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|short_description=p@chr1:101875843..101875867,- | |||
}} |
Revision as of 23:11, 11 September 2013
Short description: | p@chr1:101875843..101875867, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:101875843..101875867, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.35e-27 | 36 |
lymphocyte of B lineage | 5.99e-25 | 24 |
pro-B cell | 5.99e-25 | 24 |
endothelial cell of vascular tree | 9.92e-25 | 24 |
meso-epithelial cell | 2.90e-21 | 45 |
lymphangioblast | 1.82e-19 | 6 |
endothelial cell of lymphatic vessel | 1.82e-19 | 6 |
vascular lymphangioblast | 1.82e-19 | 6 |
vein endothelial cell | 3.63e-19 | 6 |
lining cell | 2.75e-16 | 58 |
barrier cell | 2.75e-16 | 58 |
antibody secreting cell | 7.55e-14 | 1 |
plasma cell | 7.55e-14 | 1 |
plasmablast | 7.55e-14 | 1 |
lymphoid lineage restricted progenitor cell | 3.14e-11 | 52 |
blood vessel endothelial cell | 3.20e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.20e-11 | 18 |
lymphocyte | 5.25e-11 | 53 |
common lymphoid progenitor | 5.25e-11 | 53 |
endothelial cell of sinusoid | 1.28e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.28e-07 | 2 |
mature B cell | 1.45e-07 | 2 |
pre-B-II cell | 1.45e-07 | 2 |
transitional stage B cell | 1.45e-07 | 2 |
small pre-B-II cell | 1.45e-07 | 2 |
immature B cell | 1.45e-07 | 2 |
mesodermal cell | 2.87e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 9.21e-15 | 8 |
lymph vasculature | 9.21e-15 | 8 |
lymphatic part of lymphoid system | 9.21e-15 | 8 |
vein | 5.42e-13 | 9 |
venous blood vessel | 5.42e-13 | 9 |
venous system | 5.42e-13 | 9 |
lymphoid system | 6.26e-12 | 10 |
blood vessel endothelium | 3.20e-11 | 18 |
endothelium | 3.20e-11 | 18 |
cardiovascular system endothelium | 3.20e-11 | 18 |
vessel | 6.70e-11 | 68 |
vasculature | 2.14e-09 | 78 |
vascular system | 2.14e-09 | 78 |
simple squamous epithelium | 3.18e-09 | 22 |
squamous epithelium | 3.84e-08 | 25 |
hepatic sinusoid | 1.28e-07 | 2 |
abdomen blood vessel | 1.28e-07 | 2 |
sinusoid | 1.28e-07 | 2 |
abdominal segment blood vessel | 1.28e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.65e-14 | 1 |
monogenic disease | 6.65e-14 | 1 |
xeroderma pigmentosum | 6.65e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.