FFCP PHASE1:Hg19::chr1:145439323..145439355,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10628|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16952|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_uc010oys.1_5end|coexpression_cluster_id=C719|description=CAGE_peak_10_at_TXNIP_5end|id=chr1:145439323..145439355,+|ontology_enrichment_celltype=CL:0000738!4.76e-42!140;CL:0000766!1.56e-33!76;CL:0002031!1.71e-30!124;CL:0002057!2.94e-30!42;CL:0000037!7.49e-29!172;CL:0000566!7.49e-29!172;CL:0002087!1.30e-28!119;CL:0002032!2.77e-27!165;CL:0000837!2.77e-27!165;CL:0000860!3.32e-27!45;CL:0000557!7.14e-27!71;CL:0000988!1.62e-25!182;CL:0000839!9.65e-25!70;CL:0002009!3.46e-24!65;CL:0002194!1.06e-22!63;CL:0000576!1.06e-22!63;CL:0000040!1.06e-22!63;CL:0000559!1.06e-22!63;CL:0000763!2.56e-21!112;CL:0000049!2.56e-21!112;CL:0000094!6.19e-10!8;CL:0002393!3.99e-08!9;CL:0002397!3.99e-08!9;CL:0000791!3.09e-07!18;CL:0000789!3.09e-07!18;CL:0002420!3.09e-07!18;CL:0002419!3.09e-07!18;CL:0000790!3.09e-07!18|ontology_enrichment_celltype_v019=CL:0000094;1.30e-27;8!CL:0000081;1.07e-19;11!CL:0000875;2.52e-12;3!CL:0002396;2.52e-12;3!CL:0000766;6.02e-12;69!CL:0000775;6.04e-12;3!CL:0000767;1.20e-10;3!CL:0000738;2.61e-09;136!CL:0000576;7.36e-09;48!CL:0000771;1.68e-08;2|ontology_enrichment_celltype_v019_2=CL:0000766,4.01e-28,72;CL:0000738,1.20e-27,136;CL:0000094,1.96e-27,8;CL:0000037,1.23e-20,168;CL:0000081,1.44e-19,11;CL:0002032,3.92e-19,161;CL:0000837,3.92e-19,161;CL:0000988,4.03e-19,177;CL:0000763,4.96e-18,108;CL:0000049,4.96e-18,108;CL:0002087,2.18e-16,115;CL:0002009,1.83e-15,61;CL:0002031,1.85e-15,120;CL:0000860,1.90e-15,42;CL:0002057,1.90e-15,42;CL:0000557,1.97e-15,67;CL:0002393,6.39e-15,9;CL:0002397,6.39e-15,9;CL:0000473,6.83e-15,48;CL:0000234,6.83e-15,48;CL:0002194,2.54e-14,59;CL:0000576,2.54e-14,59;CL:0000040,2.54e-14,59;CL:0000559,2.54e-14,59;CL:0000839,4.93e-14,66;CL:0000875,2.54e-12,3;CL:0002396,2.54e-12,3;CL:0000775,5.88e-12,3;CL:0000767,1.91e-10,3;CL:0000771,1.60e-08,2|ontology_enrichment_development_v019=CL:0002057;2.32e-11;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!4.62e-30!102;UBERON:0003061!4.62e-30!102;UBERON:0002193!2.23e-29!112;UBERON:0002371!9.61e-22!80;UBERON:0001474!5.78e-19!86;UBERON:0002405!6.35e-19!115;UBERON:0004765!4.22e-15!101;UBERON:0001434!4.22e-15!101;UBERON:0007023!9.99e-09!115;UBERON:0003081!2.57e-08!216;UBERON:0000178!7.55e-08!15;UBERON:0000179!7.55e-08!15;UBERON:0000463!7.55e-08!15|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-17;15!UBERON:0000179;3.55e-17;15!UBERON:0000463;3.55e-17;15!UBERON:0002390;4.18e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.42e-22,98;UBERON:0003061,4.42e-22,98;UBERON:0002193,2.22e-19,108;UBERON:0000178,4.52e-17,15;UBERON:0000179,4.52e-17,15;UBERON:0000463,4.52e-17,15;UBERON:0002371,4.71e-13,76;UBERON:0001474,9.26e-12,82;UBERON:0004765,2.62e-10,90;UBERON:0002405,7.90e-10,93;UBERON:0001434,7.93e-09,100;UBERON:0003081,3.82e-07,203|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,1.23852898652861,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0.257575567634187,1.74477886535478,1.13362783106643,0.727752183563449,0.929716147622738,0.411167888021826,1.54853185447552,0.28769239232215,0.768482119587302,0.47296445977717,0.344745680736619,0.645484683583826,0,1.50593871634084,0.818718450173537,1.34834090667051,0.306083892370903,0.641858054152187,0,1.31940520074686,0.598390972864896,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0.75374599577023,0.521482918420201,0.868755378820466,0.605399502633369,0.368277635987565,0.632924774881769,8.87272202510155,8.2915676986367,2.93522103711726,1.68492946719743,3.90459921387916,0.964353520182481,5.70025487482497,10.3436672143527,5.66258876670365,0,0.546138611262131,0.889509253863555,0,1.60158394814405,1.72425731986345,0.661044872784862,0,1.70763890732835,1.76171156811282,1.14681968437569,0,0,0,0.196709770113833,0.393010762749165,0.411202997999018,2.34061093546949,2.93330039970231,0.946895611469467,1.94826728407911,1.11410456885174,0.883817722424512,1.10766947291811,1.35401931882508,1.5370958367081,1.8208308658383,0.164437904603676,0.552700035571697,0.579606171470105,1.92772532110679,1.60524496853828,2.09071047609954,0.679856056185397,0.766440987203842,0.34362744548263,0.759059076058509,1.91139248594458,0,0.950452044448374,0.602300476311091,2.68771883424279,0,0.710331756132051,0,0.80642697289893,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,1.29818957461873,1.0447784237956,0.132957960518865,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0.10075209822764,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10628 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16952 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010oys.1_5end | |||
|coexpression_cluster_id=C719 | |||
|description=CAGE_peak_10_at_TXNIP_5end | |||
|id=chr1:145439323..145439355,+ | |||
|ontology_enrichment_celltype=CL:0000738!4.76e-42!140;CL:0000766!1.56e-33!76;CL:0002031!1.71e-30!124;CL:0002057!2.94e-30!42;CL:0000037!7.49e-29!172;CL:0000566!7.49e-29!172;CL:0002087!1.30e-28!119;CL:0002032!2.77e-27!165;CL:0000837!2.77e-27!165;CL:0000860!3.32e-27!45;CL:0000557!7.14e-27!71;CL:0000988!1.62e-25!182;CL:0000839!9.65e-25!70;CL:0002009!3.46e-24!65;CL:0002194!1.06e-22!63;CL:0000576!1.06e-22!63;CL:0000040!1.06e-22!63;CL:0000559!1.06e-22!63;CL:0000763!2.56e-21!112;CL:0000049!2.56e-21!112;CL:0000094!6.19e-10!8;CL:0002393!3.99e-08!9;CL:0002397!3.99e-08!9;CL:0000791!3.09e-07!18;CL:0000789!3.09e-07!18;CL:0002420!3.09e-07!18;CL:0002419!3.09e-07!18;CL:0000790!3.09e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.30e-27;8!CL:0000081;1.07e-19;11!CL:0000875;2.52e-12;3!CL:0002396;2.52e-12;3!CL:0000766;6.02e-12;69!CL:0000775;6.04e-12;3!CL:0000767;1.20e-10;3!CL:0000738;2.61e-09;136!CL:0000576;7.36e-09;48!CL:0000771;1.68e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,4.01e-28,72;CL:0000738,1.20e-27,136;CL:0000094,1.96e-27,8;CL:0000037,1.23e-20,168;CL:0000081,1.44e-19,11;CL:0002032,3.92e-19,161;CL:0000837,3.92e-19,161;CL:0000988,4.03e-19,177;CL:0000763,4.96e-18,108;CL:0000049,4.96e-18,108;CL:0002087,2.18e-16,115;CL:0002009,1.83e-15,61;CL:0002031,1.85e-15,120;CL:0000860,1.90e-15,42;CL:0002057,1.90e-15,42;CL:0000557,1.97e-15,67;CL:0002393,6.39e-15,9;CL:0002397,6.39e-15,9;CL:0000473,6.83e-15,48;CL:0000234,6.83e-15,48;CL:0002194,2.54e-14,59;CL:0000576,2.54e-14,59;CL:0000040,2.54e-14,59;CL:0000559,2.54e-14,59;CL:0000839,4.93e-14,66;CL:0000875,2.54e-12,3;CL:0002396,2.54e-12,3;CL:0000775,5.88e-12,3;CL:0000767,1.91e-10,3;CL:0000771,1.60e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.62e-30!102;UBERON:0003061!4.62e-30!102;UBERON:0002193!2.23e-29!112;UBERON:0002371!9.61e-22!80;UBERON:0001474!5.78e-19!86;UBERON:0002405!6.35e-19!115;UBERON:0004765!4.22e-15!101;UBERON:0001434!4.22e-15!101;UBERON:0007023!9.99e-09!115;UBERON:0003081!2.57e-08!216;UBERON:0000178!7.55e-08!15;UBERON:0000179!7.55e-08!15;UBERON:0000463!7.55e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.55e-17;15!UBERON:0000179;3.55e-17;15!UBERON:0000463;3.55e-17;15!UBERON:0002390;4.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.42e-22,98;UBERON:0003061,4.42e-22,98;UBERON:0002193,2.22e-19,108;UBERON:0000178,4.52e-17,15;UBERON:0000179,4.52e-17,15;UBERON:0000463,4.52e-17,15;UBERON:0002371,4.71e-13,76;UBERON:0001474,9.26e-12,82;UBERON:0004765,2.62e-10,90;UBERON:0002405,7.90e-10,93;UBERON:0001434,7.93e-09,100;UBERON:0003081,3.82e-07,203 | |||
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| |||
|short_description=p10@TXNIP | |||
}} |
Revision as of 00:04, 12 September 2013
Short description: | p10@TXNIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_TXNIP_5end |
Coexpression cluster: | C719_Neutrophils_CD14CD16_CD14_blood_Eosinophils_Peripheral_Monocytederived |
Association with transcript: | 0bp_to_uc010oys.1_5end |
EntrezGene: | TXNIP |
HGNC: | 16952 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 4.01e-28 | 72 |
leukocyte | 1.20e-27 | 136 |
granulocyte | 1.96e-27 | 8 |
hematopoietic stem cell | 1.23e-20 | 168 |
blood cell | 1.44e-19 | 11 |
hematopoietic oligopotent progenitor cell | 3.92e-19 | 161 |
hematopoietic multipotent progenitor cell | 3.92e-19 | 161 |
hematopoietic cell | 4.03e-19 | 177 |
myeloid cell | 4.96e-18 | 108 |
common myeloid progenitor | 4.96e-18 | 108 |
nongranular leukocyte | 2.18e-16 | 115 |
macrophage dendritic cell progenitor | 1.83e-15 | 61 |
hematopoietic lineage restricted progenitor cell | 1.85e-15 | 120 |
classical monocyte | 1.90e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.90e-15 | 42 |
granulocyte monocyte progenitor cell | 1.97e-15 | 67 |
intermediate monocyte | 6.39e-15 | 9 |
CD14-positive, CD16-positive monocyte | 6.39e-15 | 9 |
defensive cell | 6.83e-15 | 48 |
phagocyte | 6.83e-15 | 48 |
monopoietic cell | 2.54e-14 | 59 |
monocyte | 2.54e-14 | 59 |
monoblast | 2.54e-14 | 59 |
promonocyte | 2.54e-14 | 59 |
myeloid lineage restricted progenitor cell | 4.93e-14 | 66 |
non-classical monocyte | 2.54e-12 | 3 |
CD14-low, CD16-positive monocyte | 2.54e-12 | 3 |
neutrophil | 5.88e-12 | 3 |
basophil | 1.91e-10 | 3 |
eosinophil | 1.60e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.42e-22 | 98 |
blood island | 4.42e-22 | 98 |
hemolymphoid system | 2.22e-19 | 108 |
blood | 4.52e-17 | 15 |
haemolymphatic fluid | 4.52e-17 | 15 |
organism substance | 4.52e-17 | 15 |
bone marrow | 4.71e-13 | 76 |
bone element | 9.26e-12 | 82 |
skeletal element | 2.62e-10 | 90 |
immune system | 7.90e-10 | 93 |
skeletal system | 7.93e-09 | 100 |
lateral plate mesoderm | 3.82e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.