FFCP PHASE1:Hg19::chr1:158327034..158327044,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C419|description=CAGE_peak_at_chr1:158327034..158327044,+|id=chr1:158327034..158327044,+|ontology_enrichment_celltype=CL:0000840!2.25e-42!5;CL:0001029!2.25e-42!5;CL:0000990!4.77e-40!8;CL:0000451!1.00e-32!10;CL:0001014!2.83e-21!2;CL:0001016!2.83e-21!2;CL:0000453!1.23e-18!5;CL:0000738!5.21e-07!140;CL:0002009!8.60e-07!65|ontology_enrichment_celltype_v019=CL:0000840;8.61e-91;5!CL:0000990;1.01e-60;8!CL:0000451;8.87e-50;10!CL:0001014;2.39e-44;2!CL:0001016;2.39e-44;2!CL:0000453;1.93e-18;5|ontology_enrichment_celltype_v019_2=CL:0000840,6.52e-91,5;CL:0001029,6.52e-91,5;CL:0000990,8.36e-61,8;CL:0000451,7.62e-50,10;CL:0001014,2.39e-44,2;CL:0001016,2.39e-44,2;CL:0000453,1.93e-18,5;CL:0000738,4.23e-10,136;CL:0002009,4.64e-09,61;CL:0002031,7.96e-09,120;CL:0000557,2.86e-08,67;CL:0000037,3.94e-08,168;CL:0000988,1.06e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001736!2.68e-11!1;UBERON:0006298!2.68e-11!1;UBERON:0002370!4.68e-11!4;UBERON:0005058!4.68e-11!4;UBERON:0009113!4.68e-11!4;UBERON:0003295!4.68e-11!4;UBERON:0005562!4.68e-11!4;UBERON:0003408!1.29e-09!10;UBERON:0000974!1.49e-09!10;UBERON:0002390!2.45e-08!102;UBERON:0003061!2.45e-08!102;UBERON:0003351!1.17e-07!6;UBERON:0002193!1.80e-07!112|ontology_enrichment_uberon_v019=UBERON:0002370;2.45e-12;2!UBERON:0005058;2.45e-12;2!UBERON:0009113;2.45e-12;2|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.03e-08,93;UBERON:0002390,5.44e-08,98;UBERON:0003061,5.44e-08,98;UBERON:0002371,2.58e-07,76;UBERON:0002193,3.01e-07,108;UBERON:0001474,8.61e-07,82;UBERON:0002370,9.11e-07,4;UBERON:0005058,9.11e-07,4;UBERON:0009113,9.11e-07,4;UBERON:0003295,9.11e-07,4;UBERON:0005562,9.11e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,2.92092654289215,2.43781632218974,3.0580330919339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,4.12622691420802,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,2.26061184426021,0.869046000142011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0|short_description=p@chr1:158327034..158327044,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C419 | |||
|description=CAGE_peak_at_chr1:158327034..158327044,+ | |||
|id=chr1:158327034..158327044,+ | |||
|ontology_enrichment_celltype=CL:0000840!2.25e-42!5;CL:0001029!2.25e-42!5;CL:0000990!4.77e-40!8;CL:0000451!1.00e-32!10;CL:0001014!2.83e-21!2;CL:0001016!2.83e-21!2;CL:0000453!1.23e-18!5;CL:0000738!5.21e-07!140;CL:0002009!8.60e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.61e-91;5!CL:0000990;1.01e-60;8!CL:0000451;8.87e-50;10!CL:0001014;2.39e-44;2!CL:0001016;2.39e-44;2!CL:0000453;1.93e-18;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,6.52e-91,5;CL:0001029,6.52e-91,5;CL:0000990,8.36e-61,8;CL:0000451,7.62e-50,10;CL:0001014,2.39e-44,2;CL:0001016,2.39e-44,2;CL:0000453,1.93e-18,5;CL:0000738,4.23e-10,136;CL:0002009,4.64e-09,61;CL:0002031,7.96e-09,120;CL:0000557,2.86e-08,67;CL:0000037,3.94e-08,168;CL:0000988,1.06e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001736!2.68e-11!1;UBERON:0006298!2.68e-11!1;UBERON:0002370!4.68e-11!4;UBERON:0005058!4.68e-11!4;UBERON:0009113!4.68e-11!4;UBERON:0003295!4.68e-11!4;UBERON:0005562!4.68e-11!4;UBERON:0003408!1.29e-09!10;UBERON:0000974!1.49e-09!10;UBERON:0002390!2.45e-08!102;UBERON:0003061!2.45e-08!102;UBERON:0003351!1.17e-07!6;UBERON:0002193!1.80e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.45e-12;2!UBERON:0005058;2.45e-12;2!UBERON:0009113;2.45e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002405,2.03e-08,93;UBERON:0002390,5.44e-08,98;UBERON:0003061,5.44e-08,98;UBERON:0002371,2.58e-07,76;UBERON:0002193,3.01e-07,108;UBERON:0001474,8.61e-07,82;UBERON:0002370,9.11e-07,4;UBERON:0005058,9.11e-07,4;UBERON:0009113,9.11e-07,4;UBERON:0003295,9.11e-07,4;UBERON:0005562,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,2.92092654289215,2.43781632218974,3.0580330919339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,4.12622691420802,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.349843349309,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,2.26061184426021,0.869046000142011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p@chr1:158327034..158327044,+ | |||
}} |
Revision as of 01:04, 12 September 2013
Short description: | p@chr1:158327034..158327044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:158327034..158327044, + |
Coexpression cluster: | C419_acute_chronic_thymus_xeroderma_Burkitt_Hodgkin_CD4 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 6.52e-91 | 5 |
common dendritic progenitor | 6.52e-91 | 5 |
conventional dendritic cell | 8.36e-61 | 8 |
dendritic cell | 7.62e-50 | 10 |
CD1a-positive Langerhans cell | 2.39e-44 | 2 |
immature CD1a-positive Langerhans cell | 2.39e-44 | 2 |
Langerhans cell | 1.93e-18 | 5 |
leukocyte | 4.23e-10 | 136 |
macrophage dendritic cell progenitor | 4.64e-09 | 61 |
hematopoietic lineage restricted progenitor cell | 7.96e-09 | 120 |
granulocyte monocyte progenitor cell | 2.86e-08 | 67 |
hematopoietic stem cell | 3.94e-08 | 168 |
hematopoietic cell | 1.06e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
immune system | 2.03e-08 | 93 |
hematopoietic system | 5.44e-08 | 98 |
blood island | 5.44e-08 | 98 |
bone marrow | 2.58e-07 | 76 |
hemolymphoid system | 3.01e-07 | 108 |
bone element | 8.61e-07 | 82 |
thymus | 9.11e-07 | 4 |
hemolymphoid system gland | 9.11e-07 | 4 |
thymic region | 9.11e-07 | 4 |
pharyngeal gland | 9.11e-07 | 4 |
thymus primordium | 9.11e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.