FFCP PHASE1:Hg19::chr1:248020481..248020496,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25893|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24150|TSSclassifier=S|UniProt=Q8NG06|association_with_transcript=-4bp_to_ENST00000366481,NM_015431,uc001ido.2_5end|coexpression_cluster_id=C14|description=CAGE_peak_1_at_TRIM58_5end|id=chr1:248020481..248020496,+|ontology_enrichment_celltype=CL:0000763!2.18e-10!112;CL:0000049!2.18e-10!112;CL:0000077!2.70e-09!19|ontology_enrichment_celltype_v019=CL:0000077;6.67e-14;19|ontology_enrichment_celltype_v019_2=CL:0000077,5.74e-14,19;CL:0000763,9.10e-09,108;CL:0000049,9.10e-09,108|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!8.83e-10!31;DOID:1240!3.59e-07!39|ontology_enrichment_disease_v019=DOID:8692;1.82e-14;31!DOID:1036;1.68e-09;8!DOID:1240;1.14e-08;39|ontology_enrichment_disease_v019_2=DOID:8692,4.69e-15,31;DOID:1240,9.36e-11,39;DOID:1036,1.75e-09,8;DOID:2531,9.88e-09,51;DOID:0060083,9.88e-09,51|ontology_enrichment_uberon=UBERON:0000178!1.64e-10!15;UBERON:0000179!1.64e-10!15;UBERON:0000463!1.64e-10!15;UBERON:0007023!4.74e-09!115;UBERON:0002390!1.80e-07!102;UBERON:0003061!1.80e-07!102|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-10;15!UBERON:0000179;1.29e-10;15!UBERON:0000463;1.29e-10;15!UBERON:0002390;3.77e-10;32|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.46e-10,15;UBERON:0000179,1.46e-10,15;UBERON:0000463,1.46e-10,15|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,2.63766978228454,0,0,0,0,0,0,0,0.612002073732759,0,0.286235987131057,0.410623275218653,0.502170558379211,0,0,0,3.54027849164014,0.767658796194425,1.08371286321253,0,0,0,0,0,3.81680571135301,0.553995408531877,0.200544447470142,0.434021741431704,2.01523926815932,0.647787332037959,0,1.01778767145695,0,0.727752183563449,0.464858073811369,0.411167888021826,0.309706370895104,1.1507695692886,0,0.47296445977717,1.37898272294647,0,0,1.31769637679823,0,0,2.14258724659632,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0,0.56738522469114,0.622822248995575,0.502497330513487,0,0.217188844705117,0,0.368277635987565,0.316462387440884,0.845021145247767,0,0,0.112328631146495,0,0.48217676009124,0.285012743741249,0,0.365328307529268,0,0.546138611262131,0,0.853460445133014,2.00197993518006,1.72425731986345,1.32208974556972,0,0,1.17447437874188,0.764546456250458,2.64342657158052,5.04457706683382,2.63384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,0,0.0945348171640679,0,0.087834785693126,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,5.60677600142307,1.06748995729705,0.74000264525148,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0.4115740113314,0,0,0,0,0,0,0,0.219500570817251,0,0.201057944823262,0,0,2.07986957055916,0,0,0.117408694235822,0,0,0,0,0,1.96973604869918,0,0,0,0,0,0.0895585227028483,0,0,0,0.968532774145487,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,1.50719688529793,1.74306691720059,3.59902768255405,0,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0.410952645100767,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0.335032530668698,0,1.49801404789436,0,2.48649308061621,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,0.862856803274467,0.533637789017222,0.606255142892519,3.32870879020994,0,0,0.767309866440312,1.12264037773229,0.128139149255701,0,1.12597744800525,0,0.154209693802656,0,0,0,0,0,0,0.0920809889358963,0.114814448164607,0,0,0,0,0.784349769176855,1.46139224653261,0.316654886678627,0,0,0.863663664408557,0,0.541892875087706,0.501689773854853,0,0,0.447749509444357,118.619593265451,127.841935551176,1.28225062558195,1.64007322849853,0.650756789328606,1.64865618636356,0.457847324091717,0.247528499761764,0,0,0,0,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.38126038784765,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,1.97701981631236,0,0,0,0,230.888662200637,229.391162142713,241.530407361845,83.8575849611417,60.0588918705844,169.251534221299,214.392480583532,320.422571222885,0,0.962479855263359,1.71528151186722,0,0,0.284567373393656,0.637705090915289,2.3949524571938,1.7235483311913,1.69338866179106,0.324621940274555,0.842391534340376,0,0,0,1.52362600021443,0.1605880751037,0,0,0,2.45792611446766,1.78940886313933,1.66849141711908,0.781552381608161,2.78406173895242,13.5396138842484,6.76139196189958,5.32915148796512,5.63948020351398,0,0.146508179271894,0.242721043499027,0,0,0.71623345421307,0.593929361665277,2.15012491469462,0,0.140669416410513,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,1.1837208676432,347.25048390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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25893 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |||
|TSSclassifier=S | |||
|UniProt=Q8NG06 | |||
|association_with_transcript=-4bp_to_ENST00000366481,NM_015431,uc001ido.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_TRIM58_5end | |||
|id=chr1:248020481..248020496,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.18e-10!112;CL:0000049!2.18e-10!112;CL:0000077!2.70e-09!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;6.67e-14;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,5.74e-14,19;CL:0000763,9.10e-09,108;CL:0000049,9.10e-09,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!8.83e-10!31;DOID:1240!3.59e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.82e-14;31!DOID:1036;1.68e-09;8!DOID:1240;1.14e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.69e-15,31;DOID:1240,9.36e-11,39;DOID:1036,1.75e-09,8;DOID:2531,9.88e-09,51;DOID:0060083,9.88e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.64e-10!15;UBERON:0000179!1.64e-10!15;UBERON:0000463!1.64e-10!15;UBERON:0007023!4.74e-09!115;UBERON:0002390!1.80e-07!102;UBERON:0003061!1.80e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-10;15!UBERON:0000179;1.29e-10;15!UBERON:0000463;1.29e-10;15!UBERON:0002390;3.77e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.46e-10,15;UBERON:0000179,1.46e-10,15;UBERON:0000463,1.46e-10,15 | |||
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| |||
|short_description=p1@TRIM58 | |||
}} |
Revision as of 04:48, 12 September 2013
Short description: | p1@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRIM58_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -4bp_to_ENST00000366481, NM_015431, uc001ido.2_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | Q8NG06 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 5.74e-14 | 19 |
myeloid cell | 9.10e-09 | 108 |
common myeloid progenitor | 9.10e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.46e-10 | 15 |
haemolymphatic fluid | 1.46e-10 | 15 |
organism substance | 1.46e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.69e-15 | 31 |
leukemia | 9.36e-11 | 39 |
chronic leukemia | 1.75e-09 | 8 |
hematologic cancer | 9.88e-09 | 51 |
immune system cancer | 9.88e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.