FFCP PHASE1:Hg19::chr10:3930415..3930424,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:3930415..3930424,+|id=chr10:3930415..3930424,+|ontology_enrichment_celltype=CL:0002057!2.24e-47!42;CL:0000860!9.87e-44!45;CL:0000738!1.48e-36!140;CL:0000557!4.93e-34!71;CL:0002009!1.22e-32!65;CL:0000839!1.63e-29!70;CL:0000766!8.53e-29!76;CL:0002194!1.31e-28!63;CL:0000576!1.31e-28!63;CL:0000040!1.31e-28!63;CL:0000559!1.31e-28!63;CL:0000037!1.02e-27!172;CL:0000566!1.02e-27!172;CL:0002031!3.27e-27!124;CL:0002087!1.05e-26!119;CL:0000988!1.36e-25!182;CL:0000763!5.15e-25!112;CL:0000049!5.15e-25!112;CL:0002032!2.57e-23!165;CL:0000837!2.57e-23!165;CL:0000134!5.56e-17!358;CL:0002320!2.07e-16!365;CL:0000453!1.06e-15!5;CL:0000048!2.86e-15!430;CL:0000723!7.05e-15!436;CL:0000219!2.11e-14!390;CL:0000034!2.26e-14!444;CL:0000623!1.69e-10!3;CL:0000825!1.69e-10!3;CL:0000451!7.01e-10!10;CL:0000842!8.00e-10!3;CL:0002371!2.56e-09!591;CL:0000990!1.39e-08!8;CL:0000144!4.51e-08!625;CL:0001014!5.41e-08!2;CL:0001016!5.41e-08!2;CL:0000063!6.66e-08!578;CL:0000224!1.80e-07!4|ontology_enrichment_celltype_v019=CL:0000860;2.28e-34;33!CL:0002057;2.28e-34;33!CL:0000473;1.01e-25;39!CL:0000234;1.01e-25;39!CL:0000576;4.13e-18;48!CL:0000766;1.33e-13;69!CL:0002087;7.04e-11;104!CL:0001014;1.17e-09;2!CL:0001016;1.17e-09;2!CL:0000763;6.04e-07;100|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-38,42;CL:0002057,1.68e-38,42;CL:0000473,1.28e-33,48;CL:0000234,1.28e-33,48;CL:0002009,2.05e-31,61;CL:0000557,1.39e-28,67;CL:0002194,8.98e-27,59;CL:0000576,8.98e-27,59;CL:0000040,8.98e-27,59;CL:0000559,8.98e-27,59;CL:0000839,6.58e-24,66;CL:0000766,6.89e-22,72;CL:0002031,8.13e-19,120;CL:0000763,1.50e-17,108;CL:0000049,1.50e-17,108;CL:0000738,1.60e-16,136;CL:0002087,2.12e-16,115;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0001014,1.12e-09,2;CL:0001016,1.12e-09,2|ontology_enrichment_development_v019=CL:0002057;1.15e-23;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!2.42e-29!80;UBERON:0001474!9.26e-27!86;UBERON:0002390!1.54e-26!102;UBERON:0003061!1.54e-26!102;UBERON:0002193!4.03e-25!112;UBERON:0004765!1.21e-21!101;UBERON:0001434!1.21e-21!101;UBERON:0002405!5.48e-21!115;UBERON:0002384!1.24e-15!375;UBERON:0002204!5.64e-13!167;UBERON:0003081!3.33e-12!216|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-25,76;UBERON:0001474,2.73e-23,82;UBERON:0004765,3.55e-21,90;UBERON:0002405,1.78e-20,93;UBERON:0002390,2.10e-19,98;UBERON:0003061,2.10e-19,98;UBERON:0001434,5.28e-19,100;UBERON:0002193,1.50e-17,108;UBERON:0002204,4.42e-11,167;UBERON:0003081,5.90e-09,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0.822335776043652,0.929119112685311,0.863077176966451,0.256160706529101,0.709446689665756,2.06847408441971,3.87290810150296,0,0,0.272906150057846,0.449446968890169,7.95818120164347,6.73950956859797,15.344091019177,0,0.199463657621632,0.426224750532694,1.16083695451434,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0,0,1.47311054395026,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:3930415..3930424,+ | |||
|id=chr10:3930415..3930424,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.24e-47!42;CL:0000860!9.87e-44!45;CL:0000738!1.48e-36!140;CL:0000557!4.93e-34!71;CL:0002009!1.22e-32!65;CL:0000839!1.63e-29!70;CL:0000766!8.53e-29!76;CL:0002194!1.31e-28!63;CL:0000576!1.31e-28!63;CL:0000040!1.31e-28!63;CL:0000559!1.31e-28!63;CL:0000037!1.02e-27!172;CL:0000566!1.02e-27!172;CL:0002031!3.27e-27!124;CL:0002087!1.05e-26!119;CL:0000988!1.36e-25!182;CL:0000763!5.15e-25!112;CL:0000049!5.15e-25!112;CL:0002032!2.57e-23!165;CL:0000837!2.57e-23!165;CL:0000134!5.56e-17!358;CL:0002320!2.07e-16!365;CL:0000453!1.06e-15!5;CL:0000048!2.86e-15!430;CL:0000723!7.05e-15!436;CL:0000219!2.11e-14!390;CL:0000034!2.26e-14!444;CL:0000623!1.69e-10!3;CL:0000825!1.69e-10!3;CL:0000451!7.01e-10!10;CL:0000842!8.00e-10!3;CL:0002371!2.56e-09!591;CL:0000990!1.39e-08!8;CL:0000144!4.51e-08!625;CL:0001014!5.41e-08!2;CL:0001016!5.41e-08!2;CL:0000063!6.66e-08!578;CL:0000224!1.80e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.28e-34;33!CL:0002057;2.28e-34;33!CL:0000473;1.01e-25;39!CL:0000234;1.01e-25;39!CL:0000576;4.13e-18;48!CL:0000766;1.33e-13;69!CL:0002087;7.04e-11;104!CL:0001014;1.17e-09;2!CL:0001016;1.17e-09;2!CL:0000763;6.04e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.68e-38,42;CL:0002057,1.68e-38,42;CL:0000473,1.28e-33,48;CL:0000234,1.28e-33,48;CL:0002009,2.05e-31,61;CL:0000557,1.39e-28,67;CL:0002194,8.98e-27,59;CL:0000576,8.98e-27,59;CL:0000040,8.98e-27,59;CL:0000559,8.98e-27,59;CL:0000839,6.58e-24,66;CL:0000766,6.89e-22,72;CL:0002031,8.13e-19,120;CL:0000763,1.50e-17,108;CL:0000049,1.50e-17,108;CL:0000738,1.60e-16,136;CL:0002087,2.12e-16,115;CL:0002032,7.73e-14,161;CL:0000837,7.73e-14,161;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0001014,1.12e-09,2;CL:0001016,1.12e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.42e-29!80;UBERON:0001474!9.26e-27!86;UBERON:0002390!1.54e-26!102;UBERON:0003061!1.54e-26!102;UBERON:0002193!4.03e-25!112;UBERON:0004765!1.21e-21!101;UBERON:0001434!1.21e-21!101;UBERON:0002405!5.48e-21!115;UBERON:0002384!1.24e-15!375;UBERON:0002204!5.64e-13!167;UBERON:0003081!3.33e-12!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-25,76;UBERON:0001474,2.73e-23,82;UBERON:0004765,3.55e-21,90;UBERON:0002405,1.78e-20,93;UBERON:0002390,2.10e-19,98;UBERON:0003061,2.10e-19,98;UBERON:0001434,5.28e-19,100;UBERON:0002193,1.50e-17,108;UBERON:0002204,4.42e-11,167;UBERON:0003081,5.90e-09,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,1.66198622559563,0.802177789880567,0.217010870715852,0,0,0,0.145398238779565,0,0,0.464858073811369,0.822335776043652,0.929119112685311,0.863077176966451,0.256160706529101,0.709446689665756,2.06847408441971,3.87290810150296,0,0,0.272906150057846,0.449446968890169,7.95818120164347,6.73950956859797,15.344091019177,0,0.199463657621632,0.426224750532694,1.16083695451434,0.56738522469114,1.86846674698672,0.251248665256743,0.521482918420201,0,0,1.47311054395026,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,1.44824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.215627574859517,0.898401253958239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.674921674654501,2.32140586367385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0.450772826991655,0.380805212168795,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:3930415..3930424,+ | |||
}} |
Revision as of 13:23, 10 September 2013
Short description: | p@chr10:3930415..3930424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:3930415..3930424, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.68e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.68e-38 | 42 |
defensive cell | 1.28e-33 | 48 |
phagocyte | 1.28e-33 | 48 |
macrophage dendritic cell progenitor | 2.05e-31 | 61 |
granulocyte monocyte progenitor cell | 1.39e-28 | 67 |
monopoietic cell | 8.98e-27 | 59 |
monocyte | 8.98e-27 | 59 |
monoblast | 8.98e-27 | 59 |
promonocyte | 8.98e-27 | 59 |
myeloid lineage restricted progenitor cell | 6.58e-24 | 66 |
myeloid leukocyte | 6.89e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 8.13e-19 | 120 |
myeloid cell | 1.50e-17 | 108 |
common myeloid progenitor | 1.50e-17 | 108 |
leukocyte | 1.60e-16 | 136 |
nongranular leukocyte | 2.12e-16 | 115 |
hematopoietic oligopotent progenitor cell | 7.73e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.73e-14 | 161 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
CD1a-positive Langerhans cell | 1.12e-09 | 2 |
immature CD1a-positive Langerhans cell | 1.12e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-25 | 76 |
bone element | 2.73e-23 | 82 |
skeletal element | 3.55e-21 | 90 |
immune system | 1.78e-20 | 93 |
hematopoietic system | 2.10e-19 | 98 |
blood island | 2.10e-19 | 98 |
skeletal system | 5.28e-19 | 100 |
hemolymphoid system | 1.50e-17 | 108 |
musculoskeletal system | 4.42e-11 | 167 |
lateral plate mesoderm | 5.90e-09 | 203 |
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