FFCP PHASE1:Hg19::chr11:8704552..8704571,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6157|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10329|TSSclassifier=S|UniProt=E9PJD9|association_with_transcript=-176bp_to_ENST00000526562_5end|description=CAGE_peak_2_at_RPL27A_5end|id=chr11:8704552..8704571,+|ontology_enrichment_celltype=CL:0000548!6.58e-23!679;CL:0000004!6.58e-23!679;CL:0000255!6.58e-23!679;CL:0000012!2.34e-22!682;CL:0000220!2.16e-19!246;CL:0002321!3.47e-19!248;CL:0000055!4.09e-17!180;CL:0000144!2.41e-15!625;CL:0002371!8.99e-14!591;CL:0000222!1.30e-12!119;CL:0000680!1.61e-11!57;CL:0000056!1.61e-11!57;CL:0000355!1.61e-11!57;CL:0000003!4.04e-11!722;CL:0000187!1.35e-10!54;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0000066!2.78e-10!254;CL:0000183!4.55e-10!59;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000359!2.86e-07!32;CL:0000063!4.15e-07!578|ontology_enrichment_celltype_v019=CL:0000359;3.81e-08;32|ontology_enrichment_celltype_v019_2=CL:0000680,4.21e-12,58;CL:0000056,4.21e-12,58;CL:0000355,4.21e-12,58;CL:0000222,2.66e-11,121;CL:0002321,3.78e-11,250;CL:0000187,6.53e-11,55;CL:0000393,7.72e-10,61;CL:0000211,7.72e-10,61;CL:0000359,3.57e-08,32;CL:0000192,4.61e-08,43;CL:0000514,4.61e-08,43|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004290!3.33e-11!70;UBERON:0000914!3.12e-10!83;UBERON:0002329!3.12e-10!83;UBERON:0003077!3.12e-10!83;UBERON:0003059!3.12e-10!83;UBERON:0007282!3.12e-10!83;UBERON:0009618!3.12e-10!83;UBERON:0007285!3.12e-10!83;UBERON:0000486!3.13e-10!82;UBERON:0001134!2.53e-09!61;UBERON:0002036!2.53e-09!61;UBERON:0003082!2.53e-09!61;UBERON:0002385!1.84e-08!63;UBERON:0001015!1.84e-08!63;UBERON:0000383!1.84e-08!63;UBERON:0001637!2.13e-08!42;UBERON:0003509!2.13e-08!42;UBERON:0004572!2.13e-08!42;UBERON:0001737!1.29e-07!9;UBERON:0003104!2.05e-07!238;UBERON:0009142!2.05e-07!238;UBERON:0000490!2.30e-07!138|ontology_enrichment_uberon_v019=UBERON:0001737;3.71e-10;9!UBERON:0001557;3.71e-10;9|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.85e-13,78;UBERON:0002329,2.76e-13,71;UBERON:0003059,2.76e-13,71;UBERON:0007282,2.76e-13,71;UBERON:0004290,2.76e-13,71;UBERON:0009618,2.76e-13,71;UBERON:0003077,7.12e-13,72;UBERON:0007285,7.12e-13,72;UBERON:0007524,1.78e-12,73;UBERON:0000486,5.54e-11,83;UBERON:0001134,1.89e-10,62;UBERON:0002036,1.89e-10,62;UBERON:0003082,1.89e-10,62;UBERON:0001737,5.44e-10,9;UBERON:0002385,1.02e-09,64;UBERON:0001015,1.02e-09,64;UBERON:0000383,1.02e-09,64;UBERON:0000490,1.07e-08,148;UBERON:0001637,1.34e-08,42;UBERON:0003509,1.34e-08,42;UBERON:0004572,1.34e-08,42;UBERON:0005256,3.87e-08,122;UBERON:0002100,1.73e-07,199|phase1_expression=0.726713517082227,2.14100523890983,1.40954404095971,2.00146596706261,0.446961094427288,2.61701557230111,2.53299878168311,1.89515962028049,1.56711376919903,1.72013755551056,8.37361401566913,1.31064823278103,1.84636884759917,0.123766352960047,0.994192127183747,2.01697543935533,3.01347264011988,2.19093027116212,1.95173119516203,1.10808952269109,0,0.626909442956176,0.572471974262113,0.684372125364421,0.753255837568817,0.534893840235659,0.903106483949403,1.33808328233255,0.393364276848904,0,0,8.27479102031034,6.92773613189975,1.84877005083394,0.619737604642413,0.853015394924529,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.767175371061182,0.361439152384566,0.50133791063589,1.15877215168659,0.795285947051099,0.486634870302636,0.661743720148475,1.10864698731282,0.43917392846563,0.261958150995425,2.18577172975525,4.07862887062872,0,0,0.132957960518865,0,0,0,0.993812036833525,2.58070378531837,0.694281003215189,1.69592382577203,2.09749718104953,0.275118041940067,1.67195973229448,0.258416759169329,0,0.66944122552934,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,0.267899184852239,0.44905874525234,0.788280363383256,0,0,2.38162267109529,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.662045904066094,0.286836620748814,1.06400514659507,1.12135520028461,2.1349799145941,2.71334303258876,0.622422070799533,0.67355336034844,1.47115712802113,0.756787138224657,1.15235184896,1.64025002283658,4.05808099879417,2.2818872861778,2.83952493048422,1.05691048779388,2.10434827678571,1.40450806702248,1.02077085627447,1.10550885580591,0.413303124703062,0,0.494533858557114,0.910161361938026,0.718618141816238,0.505008341862199,0.500474079487857,0.831192346452549,0,0.919463387397059,0.300476117813194,1.58805056424029,0.17938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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6157 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10329 | |||
|TSSclassifier=S | |||
|UniProt=E9PJD9 | |||
|association_with_transcript=-176bp_to_ENST00000526562_5end | |||
|description=CAGE_peak_2_at_RPL27A_5end | |||
|id=chr11:8704552..8704571,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.58e-23!679;CL:0000004!6.58e-23!679;CL:0000255!6.58e-23!679;CL:0000012!2.34e-22!682;CL:0000220!2.16e-19!246;CL:0002321!3.47e-19!248;CL:0000055!4.09e-17!180;CL:0000144!2.41e-15!625;CL:0002371!8.99e-14!591;CL:0000222!1.30e-12!119;CL:0000680!1.61e-11!57;CL:0000056!1.61e-11!57;CL:0000355!1.61e-11!57;CL:0000003!4.04e-11!722;CL:0000187!1.35e-10!54;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0000066!2.78e-10!254;CL:0000183!4.55e-10!59;CL:0000192!6.40e-08!42;CL:0000514!6.40e-08!42;CL:0000359!2.86e-07!32;CL:0000063!4.15e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.81e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.21e-12,58;CL:0000056,4.21e-12,58;CL:0000355,4.21e-12,58;CL:0000222,2.66e-11,121;CL:0002321,3.78e-11,250;CL:0000187,6.53e-11,55;CL:0000393,7.72e-10,61;CL:0000211,7.72e-10,61;CL:0000359,3.57e-08,32;CL:0000192,4.61e-08,43;CL:0000514,4.61e-08,43 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!3.33e-11!70;UBERON:0000914!3.12e-10!83;UBERON:0002329!3.12e-10!83;UBERON:0003077!3.12e-10!83;UBERON:0003059!3.12e-10!83;UBERON:0007282!3.12e-10!83;UBERON:0009618!3.12e-10!83;UBERON:0007285!3.12e-10!83;UBERON:0000486!3.13e-10!82;UBERON:0001134!2.53e-09!61;UBERON:0002036!2.53e-09!61;UBERON:0003082!2.53e-09!61;UBERON:0002385!1.84e-08!63;UBERON:0001015!1.84e-08!63;UBERON:0000383!1.84e-08!63;UBERON:0001637!2.13e-08!42;UBERON:0003509!2.13e-08!42;UBERON:0004572!2.13e-08!42;UBERON:0001737!1.29e-07!9;UBERON:0003104!2.05e-07!238;UBERON:0009142!2.05e-07!238;UBERON:0000490!2.30e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.71e-10;9!UBERON:0001557;3.71e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.85e-13,78;UBERON:0002329,2.76e-13,71;UBERON:0003059,2.76e-13,71;UBERON:0007282,2.76e-13,71;UBERON:0004290,2.76e-13,71;UBERON:0009618,2.76e-13,71;UBERON:0003077,7.12e-13,72;UBERON:0007285,7.12e-13,72;UBERON:0007524,1.78e-12,73;UBERON:0000486,5.54e-11,83;UBERON:0001134,1.89e-10,62;UBERON:0002036,1.89e-10,62;UBERON:0003082,1.89e-10,62;UBERON:0001737,5.44e-10,9;UBERON:0002385,1.02e-09,64;UBERON:0001015,1.02e-09,64;UBERON:0000383,1.02e-09,64;UBERON:0000490,1.07e-08,148;UBERON:0001637,1.34e-08,42;UBERON:0003509,1.34e-08,42;UBERON:0004572,1.34e-08,42;UBERON:0005256,3.87e-08,122;UBERON:0002100,1.73e-07,199 | |||
|phase1_expression=0.726713517082227,2.14100523890983,1.40954404095971,2.00146596706261,0.446961094427288,2.61701557230111,2.53299878168311,1.89515962028049,1.56711376919903,1.72013755551056,8.37361401566913,1.31064823278103,1.84636884759917,0.123766352960047,0.994192127183747,2.01697543935533,3.01347264011988,2.19093027116212,1.95173119516203,1.10808952269109,0,0.626909442956176,0.572471974262113,0.684372125364421,0.753255837568817,0.534893840235659,0.903106483949403,1.33808328233255,0.393364276848904,0,0,8.27479102031034,6.92773613189975,1.84877005083394,0.619737604642413,0.853015394924529,0,0,0,0.217010870715852,0,0,0,0,0,0.485168122375632,0,0,0.309706370895104,0,0.256160706529101,0.236482229888585,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0,1.0429658368404,0,0,0,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0.128091319725675,0.390178042679635,0,0,0,0.14828656316206,0,0,0.566546713487831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.767175371061182,0.361439152384566,0.50133791063589,1.15877215168659,0.795285947051099,0.486634870302636,0.661743720148475,1.10864698731282,0.43917392846563,0.261958150995425,2.18577172975525,4.07862887062872,0,0,0.132957960518865,0,0,0,0.993812036833525,2.58070378531837,0.694281003215189,1.69592382577203,2.09749718104953,0.275118041940067,1.67195973229448,0.258416759169329,0,0.66944122552934,0.805658634218294,0,0.24406205754817,1.10298924103761,0.81014194788176,0.267899184852239,0.44905874525234,0.788280363383256,0,0,2.38162267109529,0,0,0.436094052142534,0.993943903390637,0.759783069987479,0.662045904066094,0.286836620748814,1.06400514659507,1.12135520028461,2.1349799145941,2.71334303258876,0.622422070799533,0.67355336034844,1.47115712802113,0.756787138224657,1.15235184896,1.64025002283658,4.05808099879417,2.2818872861778,2.83952493048422,1.05691048779388,2.10434827678571,1.40450806702248,1.02077085627447,1.10550885580591,0.413303124703062,0,0.494533858557114,0.910161361938026,0.718618141816238,0.505008341862199,0.500474079487857,0.831192346452549,0,0.919463387397059,0.300476117813194,1.58805056424029,0.179389635688862,0.640672166455702,1.05965950579781,0.900273288253207,0.412210116953756,0,0.930584281657949,0.168776332241266,0.0974370051611986,0.757301322732344,1.19664868234989,0.161646056818812,1.42003837006646,0.503760491138201,1.18692414617341,1.15956511897978,1.90922284413584,0.573609190778008,0.609868530647977,0.265059536642971,0.232387885739037,0.829288440122964,1.7662459561294,1.82488679537915,1.56449532329816,1.28648187638577,0,0.464367928031979,2.16563844500876,6.27026040211173,5.56329477257736,6.7483088367375,5.18381671842252,6.31850387867978,5.45722423955522,5.79774625088707,6.47530834913642,7.69494313892781,0,2.80483547606892,1.6462960453256,1.47008711385542,1.26755034821831,0,1.18157981336281,0.441463099414651,0.737930631258681,0.857839051492628,1.09750285408626,1.1240175325762,1.00528972411631,0.277765335475589,0.325808305310325,2.07986957055916,1.44331342025273,0.34779121492523,0.70445216541493,0.577465791044295,0.925971025153221,0.380508304469197,0,0.858486162094873,0,0.468008530278475,0.297262324577456,4.68669169933885,1.17587489739202,2.1266264586358,1.97028749946266,1.45316969256981,0,0,0,0.207328115540772,0,0,0.952468414382536,0.381988425558278,0,1.71072446022705,0.925447434329912,3.00343057843917,0.571652865261156,1.12131084345361,0.43596006883328,0.7333828582095,1.42198887333556,3.57656445851882,5.917119267892,0.797814349754612,2.08014873822732,1.54324424557285,0,2.66422179016099,0.714889968290738,2.17048642156577,0.823240336780769,0.65147236858747,0.355391948742546,3.16780749173372,1.20575750823834,0.871533458600294,0.899756920638513,0,0,2.10833939483032,0.958499421966331,0,1.42636905040718,1.30303176000821,1.64381058040307,2.32779252211864,1.56919201590938,0.197030760201927,0.215627574859517,0.385029108839245,1.27047312111232,1.30139853857622,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0.36807447515742,1.50051156317903,0.813795071099207,0.415941723061614,1.96271887676878,0.946214490203608,0.35142424497814,1.20378439891088,4.5481500811197,2.0694614258501,0.664225598535437,2.39679919104214,0.60818530127658,0.391602314925481,0.686286847621712,0.413536052245775,0.215714200818617,0,4.24378600024763,3.32870879020994,1.81434175997808,1.73675465473144,0.460385919864187,1.40330047216537,1.02511319404561,1.02341449813341,1.12597744800525,4.45254199334973,2.31314540703983,2.30830242907065,1.39616165223476,1.55776328755086,2.44041794765914,0.362578348774867,2.00506470303285,1.19705285616665,1.26295892981067,1.27463817604702,0.524497659837696,0,0.15403067420883,0,1.46139224653261,0.211103257785751,1.13733384070897,0.850468526382578,1.72732732881711,0,0.270946437543853,1.00337954770971,0.764628819135115,2.49322802678617,1.1193737736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| |||
|short_description=p2@RPL27A | |||
}} |
Revision as of 20:05, 10 September 2013
Short description: | p2@RPL27A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RPL27A_5end |
Coexpression cluster: | NA |
Association with transcript: | -176bp_to_ENST00000526562_5end |
EntrezGene: | RPL27A |
HGNC: | 10329 |
UniProt: | E9PJD9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.21e-12 | 58 |
myoblast | 4.21e-12 | 58 |
multi-potent skeletal muscle stem cell | 4.21e-12 | 58 |
mesodermal cell | 2.66e-11 | 121 |
embryonic cell | 3.78e-11 | 250 |
muscle cell | 6.53e-11 | 55 |
electrically responsive cell | 7.72e-10 | 61 |
electrically active cell | 7.72e-10 | 61 |
vascular associated smooth muscle cell | 3.57e-08 | 32 |
smooth muscle cell | 4.61e-08 | 43 |
smooth muscle myoblast | 4.61e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 1.85e-13 | 78 |
somite | 2.76e-13 | 71 |
presomitic mesoderm | 2.76e-13 | 71 |
presumptive segmental plate | 2.76e-13 | 71 |
dermomyotome | 2.76e-13 | 71 |
trunk paraxial mesoderm | 2.76e-13 | 71 |
paraxial mesoderm | 7.12e-13 | 72 |
presumptive paraxial mesoderm | 7.12e-13 | 72 |
dense mesenchyme tissue | 1.78e-12 | 73 |
multilaminar epithelium | 5.54e-11 | 83 |
skeletal muscle tissue | 1.89e-10 | 62 |
striated muscle tissue | 1.89e-10 | 62 |
myotome | 1.89e-10 | 62 |
larynx | 5.44e-10 | 9 |
muscle tissue | 1.02e-09 | 64 |
musculature | 1.02e-09 | 64 |
musculature of body | 1.02e-09 | 64 |
unilaminar epithelium | 1.07e-08 | 148 |
artery | 1.34e-08 | 42 |
arterial blood vessel | 1.34e-08 | 42 |
arterial system | 1.34e-08 | 42 |
trunk mesenchyme | 3.87e-08 | 122 |
trunk | 1.73e-07 | 199 |
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