FFCP PHASE1:Hg19::chr11:75310097..75310110,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4135|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6868|TSSclassifier=N|UniProt=|association_with_transcript=-16bp_to_ENST00000526689_5end|coexpression_cluster_id=C40|description=CAGE_peak_8_at_MAP6_5end|id=chr11:75310097..75310110,-|ontology_enrichment_celltype=CL:0000236!2.14e-16!14;CL:0000945!2.35e-13!24;CL:0000826!2.35e-13!24;CL:0000946!1.19e-10!1;CL:0000786!1.19e-10!1;CL:0000980!1.19e-10!1;CL:0000167!2.50e-10!1;CL:0000164!2.50e-10!1;CL:0000502!2.50e-10!1;CL:0000172!2.50e-10!1;CL:0000173!2.50e-10!1;CL:0002351!2.50e-10!1|ontology_enrichment_celltype_v019=CL:0000946;3.16e-29;1!CL:0000786;3.16e-29;1|ontology_enrichment_celltype_v019_2=CL:0000946,4.20e-29,1;CL:0000786,4.20e-29,1;CL:0000980,4.20e-29,1;CL:0000785,2.74e-15,2;CL:0000955,2.74e-15,2;CL:0000818,2.74e-15,2;CL:0000954,2.74e-15,2;CL:0000816,2.74e-15,2;CL:0000817,1.20e-10,3;CL:0000236,5.15e-09,14|ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!UBERON:0003056;7.42e-11;3|ontology_enrichment_disease=DOID:4430!2.50e-10!1|ontology_enrichment_disease_v019=DOID:5409;2.43e-08;4|ontology_enrichment_disease_v019_2=DOID:5409,2.43e-08,4|ontology_enrichment_uberon=UBERON:0001905!1.36e-19!2;UBERON:0002757!1.36e-19!2;UBERON:0010134!1.36e-19!2;UBERON:0002784!1.36e-19!2;UBERON:0005408!1.36e-19!2;UBERON:0001899!1.36e-19!2;UBERON:0002106!4.56e-13!3;UBERON:0004854!4.56e-13!3;UBERON:0009034!4.56e-13!3;UBERON:0002095!4.56e-13!3;UBERON:0004782!4.56e-13!3;UBERON:0003281!4.56e-13!3;UBERON:0009664!4.56e-13!3;UBERON:0002296!4.56e-13!3;UBERON:0005602!4.56e-13!3;UBERON:0001179!4.56e-13!3;UBERON:0006293!4.56e-13!3;UBERON:0001154!2.08e-10!1;UBERON:0001153!2.08e-10!1;UBERON:0003296!2.88e-10!4;UBERON:0010133!2.88e-10!4;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0002780!8.96e-10!41;UBERON:0001890!8.96e-10!41;UBERON:0006240!8.96e-10!41;UBERON:0003080!1.57e-09!42;UBERON:0003056!2.43e-08!61;UBERON:0003075!3.80e-07!86;UBERON:0007284!3.80e-07!86;UBERON:0005743!4.73e-07!86;UBERON:0001049!7.10e-07!57;UBERON:0005068!7.10e-07!57;UBERON:0006241!7.10e-07!57;UBERON:0007135!7.10e-07!57;UBERON:0002346!8.89e-07!90|ontology_enrichment_uberon_v019=UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0002106;8.99e-11;3!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000966;5.08e-07;5!UBERON:0005388;5.08e-07;5!UBERON:0001802;5.08e-07;5!UBERON:0004177;5.70e-07;5!UBERON:0005057;5.70e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9309377841047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,10.7610791110024,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,25.9459855361263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4135 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6868 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-16bp_to_ENST00000526689_5end | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_8_at_MAP6_5end | |||
|id=chr11:75310097..75310110,- | |||
|ontology_enrichment_celltype=CL:0000236!2.14e-16!14;CL:0000945!2.35e-13!24;CL:0000826!2.35e-13!24;CL:0000946!1.19e-10!1;CL:0000786!1.19e-10!1;CL:0000980!1.19e-10!1;CL:0000167!2.50e-10!1;CL:0000164!2.50e-10!1;CL:0000502!2.50e-10!1;CL:0000172!2.50e-10!1;CL:0000173!2.50e-10!1;CL:0002351!2.50e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000946;3.16e-29;1!CL:0000786;3.16e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,4.20e-29,1;CL:0000786,4.20e-29,1;CL:0000980,4.20e-29,1;CL:0000785,2.74e-15,2;CL:0000955,2.74e-15,2;CL:0000818,2.74e-15,2;CL:0000954,2.74e-15,2;CL:0000816,2.74e-15,2;CL:0000817,1.20e-10,3;CL:0000236,5.15e-09,14 | |||
|ontology_enrichment_development_v019=CL:0000954;2.37e-15;2!UBERON:0003056;7.42e-11;3 | |||
|ontology_enrichment_disease=DOID:4430!2.50e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.43e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001905!1.36e-19!2;UBERON:0002757!1.36e-19!2;UBERON:0010134!1.36e-19!2;UBERON:0002784!1.36e-19!2;UBERON:0005408!1.36e-19!2;UBERON:0001899!1.36e-19!2;UBERON:0002106!4.56e-13!3;UBERON:0004854!4.56e-13!3;UBERON:0009034!4.56e-13!3;UBERON:0002095!4.56e-13!3;UBERON:0004782!4.56e-13!3;UBERON:0003281!4.56e-13!3;UBERON:0009664!4.56e-13!3;UBERON:0002296!4.56e-13!3;UBERON:0005602!4.56e-13!3;UBERON:0001179!4.56e-13!3;UBERON:0006293!4.56e-13!3;UBERON:0001154!2.08e-10!1;UBERON:0001153!2.08e-10!1;UBERON:0003296!2.88e-10!4;UBERON:0010133!2.88e-10!4;UBERON:0001882!4.75e-10!1;UBERON:0005403!4.75e-10!1;UBERON:0002780!8.96e-10!41;UBERON:0001890!8.96e-10!41;UBERON:0006240!8.96e-10!41;UBERON:0003080!1.57e-09!42;UBERON:0003056!2.43e-08!61;UBERON:0003075!3.80e-07!86;UBERON:0007284!3.80e-07!86;UBERON:0005743!4.73e-07!86;UBERON:0001049!7.10e-07!57;UBERON:0005068!7.10e-07!57;UBERON:0006241!7.10e-07!57;UBERON:0007135!7.10e-07!57;UBERON:0002346!8.89e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.54e-15;2!UBERON:0002757;1.54e-15;2!UBERON:0010134;1.54e-15;2!UBERON:0005408;1.54e-15;2!UBERON:0001899;1.54e-15;2!UBERON:0002106;8.99e-11;3!UBERON:0003296;1.96e-08;4!UBERON:0010133;1.96e-08;4!UBERON:0002784;1.96e-08;4!UBERON:0000966;5.08e-07;5!UBERON:0005388;5.08e-07;5!UBERON:0001802;5.08e-07;5!UBERON:0004177;5.70e-07;5!UBERON:0005057;5.70e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.54e-15,2;UBERON:0002757,1.54e-15,2;UBERON:0010134,1.54e-15,2;UBERON:0005408,1.54e-15,2;UBERON:0001899,1.54e-15,2;UBERON:0002106,8.99e-11,3;UBERON:0004854,8.99e-11,3;UBERON:0009034,8.99e-11,3;UBERON:0002095,8.99e-11,3;UBERON:0004782,8.99e-11,3;UBERON:0003281,8.99e-11,3;UBERON:0009664,8.99e-11,3;UBERON:0002296,8.99e-11,3;UBERON:0005602,8.99e-11,3;UBERON:0001179,8.99e-11,3;UBERON:0006293,8.99e-11,3;UBERON:0003296,1.96e-08,4;UBERON:0010133,1.96e-08,4;UBERON:0002784,1.96e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0.400395987036012,0.574752439954483,1.32208974556972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.9309377841047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,10.7610791110024,0,0,0,1.03710588800201,0,0,0,0,0,0,0,0,0,0,0,25.9459855361263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31928620094515,0,0,0,0,0,0.235676547101626,0,0,0,0,2.53756578545605,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@MAP6 | |||
}} |
Revision as of 19:43, 10 September 2013
Short description: | p8@MAP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_MAP6_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -16bp_to_ENST00000526689_5end |
EntrezGene: | MAP6 |
HGNC: | 6868 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 4.20e-29 | 1 |
plasma cell | 4.20e-29 | 1 |
plasmablast | 4.20e-29 | 1 |
mature B cell | 2.74e-15 | 2 |
pre-B-II cell | 2.74e-15 | 2 |
transitional stage B cell | 2.74e-15 | 2 |
small pre-B-II cell | 2.74e-15 | 2 |
immature B cell | 2.74e-15 | 2 |
precursor B cell | 1.20e-10 | 3 |
B cell | 5.15e-09 | 14 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.54e-15 | 2 |
regional part of epithalamus | 1.54e-15 | 2 |
secretory circumventricular organ | 1.54e-15 | 2 |
circumventricular organ | 1.54e-15 | 2 |
epithalamus | 1.54e-15 | 2 |
spleen | 8.99e-11 | 3 |
gastrointestinal system mesentery | 8.99e-11 | 3 |
stomach region | 8.99e-11 | 3 |
mesentery | 8.99e-11 | 3 |
gastrointestinal system serosa | 8.99e-11 | 3 |
mesentery of stomach | 8.99e-11 | 3 |
gut mesentery | 8.99e-11 | 3 |
dorsal mesentery | 8.99e-11 | 3 |
dorsal mesogastrium | 8.99e-11 | 3 |
peritoneal cavity | 8.99e-11 | 3 |
spleen primordium | 8.99e-11 | 3 |
gland of diencephalon | 1.96e-08 | 4 |
neuroendocrine gland | 1.96e-08 | 4 |
regional part of diencephalon | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.43e-08 | 4 |
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