FFCP PHASE1:Hg19::chr12:72233530..72233563,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64786|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25694|TSSclassifier=S|UniProt=Q8TC07,A8K8E1,F8WCB5,F8WDJ1,F8WF35,C9JA93,F8WAX5|association_with_transcript=0bp_to_ENST00000319106,ENST00000393309,ENST00000462788,ENST00000468049,ENST00000472611,ENST00000474468,ENST00000485960,ENST00000491063,ENST00000498482,ENST00000546932,ENST00000549402_5end|coexpression_cluster_id=C181|description=CAGE_peak_1_at_TBC1D15_5end|id=chr12:72233530..72233563,+|ontology_enrichment_celltype=CL:0000738!5.08e-26!140;CL:0000037!1.96e-24!172;CL:0000566!1.96e-24!172;CL:0002032!2.84e-22!165;CL:0000837!2.84e-22!165;CL:0002031!1.24e-21!124;CL:0000988!4.26e-21!182;CL:0000766!1.02e-19!76;CL:0000860!1.15e-19!45;CL:0002057!1.30e-19!42;CL:0002087!7.85e-19!119;CL:0000763!3.20e-18!112;CL:0000049!3.20e-18!112;CL:0000839!1.55e-17!70;CL:0000557!1.54e-16!71;CL:0002009!1.25e-15!65;CL:0002194!1.07e-14!63;CL:0000576!1.07e-14!63;CL:0000040!1.07e-14!63;CL:0000559!1.07e-14!63;CL:0000134!2.04e-08!358;CL:0002320!7.40e-08!365;CL:0000791!1.12e-07!18;CL:0000789!1.12e-07!18;CL:0002420!1.12e-07!18;CL:0002419!1.12e-07!18;CL:0000790!1.12e-07!18|ontology_enrichment_celltype_v019=CL:0000860;4.78e-16;33!CL:0002057;4.78e-16;33!CL:0000576;7.47e-13;48!CL:0000473;5.40e-12;39!CL:0000234;5.40e-12;39!CL:0000766;3.68e-10;69!CL:0002087;9.94e-08;104!CL:0000791;1.05e-07;18!CL:0000789;1.05e-07;18!CL:0002419;1.05e-07;18|ontology_enrichment_celltype_v019_2=CL:0000738,4.04e-26,136;CL:0000037,2.03e-24,168;CL:0002032,2.96e-22,161;CL:0000837,2.96e-22,161;CL:0002031,9.93e-22,120;CL:0000988,1.13e-21,177;CL:0000766,4.61e-20,72;CL:0000860,1.30e-19,42;CL:0002057,1.30e-19,42;CL:0002087,6.71e-19,115;CL:0000763,2.64e-18,108;CL:0000049,2.64e-18,108;CL:0000839,7.29e-18,66;CL:0000473,7.85e-18,48;CL:0000234,7.85e-18,48;CL:0000557,8.05e-17,67;CL:0002009,6.17e-16,61;CL:0002194,5.54e-15,59;CL:0000576,5.54e-15,59;CL:0000040,5.54e-15,59;CL:0000559,5.54e-15,59;CL:0000134,2.23e-08,354;CL:0002320,8.11e-08,361;CL:0000791,1.12e-07,18;CL:0000789,1.12e-07,18;CL:0002420,1.12e-07,18;CL:0002419,1.12e-07,18;CL:0000790,1.12e-07,18|ontology_enrichment_development_v019=CL:0002057;1.96e-14;42!CL:0000790;1.05e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!5.76e-18!102;UBERON:0003061!5.76e-18!102;UBERON:0002193!3.88e-15!112;UBERON:0002371!6.02e-14!80;UBERON:0007023!1.99e-13!115;UBERON:0001474!6.90e-13!86;UBERON:0004765!8.83e-11!101;UBERON:0001434!8.83e-11!101;UBERON:0002405!1.65e-08!115;UBERON:0002384!8.11e-08!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.36e-18,98;UBERON:0003061,4.36e-18,98;UBERON:0002193,3.63e-15,108;UBERON:0002371,4.43e-14,76;UBERON:0007023,2.79e-13,114;UBERON:0001474,5.80e-13,82;UBERON:0004765,8.51e-12,90;UBERON:0002405,1.13e-11,93;UBERON:0001434,2.13e-10,100;UBERON:0002384,8.94e-08,371|phase1_expression=20.7113352368435,26.9766660102639,28.3318352232902,21.0153926541574,25.9237434767827,13.9574163856059,27.8629865985142,20.2150359496586,18.5441796021885,3.68600904752263,0,4.80571018686379,2.11013582582763,43.0706908300962,27.505982185417,29.5823064438781,29.5320318731749,31.403333886657,22.4449087443633,8.86471618152873,3.67201244239655,3.76145665773705,25.7612388417951,14.0980657825071,16.6971710661088,25.140010491076,26.6826915712324,27.4700626784741,33.4359635321568,76.7658796194425,37.4655018424904,8.27479102031034,3.0120591877825,5.54631015250181,21.5358817613239,8.81449241422014,38.7552579921998,45.9816189081458,69.7894677196093,57.073858998269,49.2614043327834,52.4707738950747,51.2575379592031,64.120623301788,88.8008467668702,66.7106168266495,59.9666915216666,69.0762051876667,80.2139500618318,67.6077121957054,69.1633907628572,103.342734461312,87.2206572263645,97.4681872211577,88.0272162863221,75.8616628356697,85.9654372682214,105.1705907203,78.663560339322,111.041443368328,107.408637134239,71.5777321405174,82.1790269401123,78.4253540980157,59.2026846802311,43.1212770765266,56.0540024096018,67.3346422888072,67.271296476206,101.427190477289,49.0373597133029,85.8086891851026,86.7106941588023,55.1376297274168,47.8359674921348,55.1402237687029,48.1889827618464,54.9647427799913,77.3090072012955,33.0614782739848,49.3313359453743,44.5700535185707,45.7590235599439,36.5912869545628,23.1272406004524,43.5264827017837,51.2506863406096,43.1064329965862,38.340602621522,38.1621501814146,64.8902784784771,74.5791230501092,82.9532905031747,58.1553845747714,117.706798226123,37.663924122836,119.009410918869,84.1043032283213,88.408644569789,63.5308682484577,91.5841569240389,100.370934815763,109.10296790843,66.1778113897931,90.444013594775,96.5887780384588,108.592349369771,31.6385559722418,32.9050149326492,29.9276986378691,29.2931018852999,75.6386053768487,97.7208451237978,134.305495701036,100.354102852778,54.6151031802269,70.1293503291516,73.1926458878002,132.835338310239,48.1033775629386,39.71609068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074539889327,20.1895837165842,26.3889167658006,28.73517324424,24.5334634447299,26.7512992104481,19.4478878432021,33.0394551083731,18.4461506313932,13.2784622279218,22.3669730570281,29.8604656648539,30.2875040085336,43.7560921291458,23.830461228679,18.9986687952159,35.5516148727537,45.3487670577677,54.9506070927075,30.1603187511334,51.0324030078234,22.9326894192489,20.6449243353124,16.6936577453315,20.9986765647676,22.725338424852,15.843778128795,9.64777121063621,51.5496660705154,19.0236130498444,20.5285495810881,27.4972898302851,26.2014291693937,19.1864449064194,50.6732721210945,17.3127180553106,85.4551178808765,80.4343110040924,16.2007026212241,14.6282001300573,104.255226891657,27.219405441706,21.5132325651317,28.4808293938476,32.4999878988085,72.2652539260483,46.453452985631,29.331640086428,17.897090431742,12.6557772009519,42.1451435099131,42.8308260777463,22.0832366627308,32.6776133673241,34.301147923554,46.2102664601353,20.594633155227,26.2336771902838,29.2406846510924,42.8698871590766,20.170506870352,35.9496445167223,44.000324672879,38.4864006148727,37.2597337266954,32.350503032211,63.2673259877216,47.12458960227,22.3857809984491,24.0668915968017,49.8914567840036,43.1703725198686,122.406386074296,18.6533144353809,53.0344817519504,66.2478932771083,95.9005654693878,82.8690376518723,50.1168391418909,45.6326590720886,44.243906434854,52.0648154602531,17.2324666734665,26.002644994473,19.35426392922,40.9733944679683,45.7206366655566,24.1034060449859,21.0026505717184,26.5590937198904,80.2622835650244,28.6620942148392,62.7314038578925,19.7610423125813,30.9467724698591,12.0256704709538,47.6597177574985,42.8503377505814,29.7241654580059,46.0343273937697,41.7711962578896,46.4413055937409,31.3306417141287,31.845854727623,31.020638566432,33.4438628642102,21.9236646323673,48.5843656395453,42.9151095937588,38.8457302312737,66.9361500702731,17.397216470073,37.3997464655537,32.0497064943085,21.8845852677505,42.5733924983695,43.5971876670386,50.9024592531337,65.3669112643696,43.217528540449,30.598338470554,36.6847491161988,40.2043247676405,139.520515884163,62.6224010096675,67.4295328742485,27.0499665653376,21.4108164506649,44.5483771224506,23.4626712223821,36.6784042244489,28.2115222996939,28.2315897372553,30.0102711417489,23.3707644238886,38.0745305225769,63.3560957529415,58.6910211358647,15.2980852929558,26.1810414204226,48.1414424869014,29.0156114170066,35.1253477759878,32.4469921592842,27.125781339542,14.3137899272441,26.099891208356,35.4921127502096,52.909046242581,90.7002658408919,51.1443380156445,57.1371384565525,34.8353369203032,63.0168773988672,61.6460655336896,37.3159468326717,28.5677317756488,39.4638239097997,48.1699782935857,33.7516906367646,48.9446647159088,28.0942892651925,30.4803447055746,26.0097308824814,23.1691062370181,45.9739336567055,35.5946581504234,19.7809942724668,42.1573016216976,11.5843369372164,29.7321418972803,28.1569130884145,52.6860624428154,26.8551477688387,35.9508658060177,32.2038069745642,17.6312670766778|short_description=p1@TBC1D15}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=64786 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25694 | |||
|TSSclassifier=S | |||
|UniProt=Q8TC07,A8K8E1,F8WCB5,F8WDJ1,F8WF35,C9JA93,F8WAX5 | |||
|association_with_transcript=0bp_to_ENST00000319106,ENST00000393309,ENST00000462788,ENST00000468049,ENST00000472611,ENST00000474468,ENST00000485960,ENST00000491063,ENST00000498482,ENST00000546932,ENST00000549402_5end | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_1_at_TBC1D15_5end | |||
|id=chr12:72233530..72233563,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.08e-26!140;CL:0000037!1.96e-24!172;CL:0000566!1.96e-24!172;CL:0002032!2.84e-22!165;CL:0000837!2.84e-22!165;CL:0002031!1.24e-21!124;CL:0000988!4.26e-21!182;CL:0000766!1.02e-19!76;CL:0000860!1.15e-19!45;CL:0002057!1.30e-19!42;CL:0002087!7.85e-19!119;CL:0000763!3.20e-18!112;CL:0000049!3.20e-18!112;CL:0000839!1.55e-17!70;CL:0000557!1.54e-16!71;CL:0002009!1.25e-15!65;CL:0002194!1.07e-14!63;CL:0000576!1.07e-14!63;CL:0000040!1.07e-14!63;CL:0000559!1.07e-14!63;CL:0000134!2.04e-08!358;CL:0002320!7.40e-08!365;CL:0000791!1.12e-07!18;CL:0000789!1.12e-07!18;CL:0002420!1.12e-07!18;CL:0002419!1.12e-07!18;CL:0000790!1.12e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-16;33!CL:0002057;4.78e-16;33!CL:0000576;7.47e-13;48!CL:0000473;5.40e-12;39!CL:0000234;5.40e-12;39!CL:0000766;3.68e-10;69!CL:0002087;9.94e-08;104!CL:0000791;1.05e-07;18!CL:0000789;1.05e-07;18!CL:0002419;1.05e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.04e-26,136;CL:0000037,2.03e-24,168;CL:0002032,2.96e-22,161;CL:0000837,2.96e-22,161;CL:0002031,9.93e-22,120;CL:0000988,1.13e-21,177;CL:0000766,4.61e-20,72;CL:0000860,1.30e-19,42;CL:0002057,1.30e-19,42;CL:0002087,6.71e-19,115;CL:0000763,2.64e-18,108;CL:0000049,2.64e-18,108;CL:0000839,7.29e-18,66;CL:0000473,7.85e-18,48;CL:0000234,7.85e-18,48;CL:0000557,8.05e-17,67;CL:0002009,6.17e-16,61;CL:0002194,5.54e-15,59;CL:0000576,5.54e-15,59;CL:0000040,5.54e-15,59;CL:0000559,5.54e-15,59;CL:0000134,2.23e-08,354;CL:0002320,8.11e-08,361;CL:0000791,1.12e-07,18;CL:0000789,1.12e-07,18;CL:0002420,1.12e-07,18;CL:0002419,1.12e-07,18;CL:0000790,1.12e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.96e-14;42!CL:0000790;1.05e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.76e-18!102;UBERON:0003061!5.76e-18!102;UBERON:0002193!3.88e-15!112;UBERON:0002371!6.02e-14!80;UBERON:0007023!1.99e-13!115;UBERON:0001474!6.90e-13!86;UBERON:0004765!8.83e-11!101;UBERON:0001434!8.83e-11!101;UBERON:0002405!1.65e-08!115;UBERON:0002384!8.11e-08!375 | |||
|ontology_enrichment_uberon_v019= | |||
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| |||
|short_description=p1@TBC1D15 | |||
}} |
Revision as of 00:22, 11 September 2013
Short description: | p1@TBC1D15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TBC1D15_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | 0bp_to_ENST00000319106, ENST00000393309, ENST00000462788, ENST00000468049, ENST00000472611, ENST00000474468, ENST00000485960, ENST00000491063, ENST00000498482, ENST00000546932, ENST00000549402_5end |
EntrezGene: | TBC1D15 |
HGNC: | 25694 |
UniProt: | Q8TC07A8K8E1F8WCB5F8WDJ1F8WF35C9JA93F8WAX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 4.04e-26 | 136 |
hematopoietic stem cell | 2.03e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.96e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.96e-22 | 161 |
hematopoietic lineage restricted progenitor cell | 9.93e-22 | 120 |
hematopoietic cell | 1.13e-21 | 177 |
myeloid leukocyte | 4.61e-20 | 72 |
classical monocyte | 1.30e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.30e-19 | 42 |
nongranular leukocyte | 6.71e-19 | 115 |
myeloid cell | 2.64e-18 | 108 |
common myeloid progenitor | 2.64e-18 | 108 |
myeloid lineage restricted progenitor cell | 7.29e-18 | 66 |
defensive cell | 7.85e-18 | 48 |
phagocyte | 7.85e-18 | 48 |
granulocyte monocyte progenitor cell | 8.05e-17 | 67 |
macrophage dendritic cell progenitor | 6.17e-16 | 61 |
monopoietic cell | 5.54e-15 | 59 |
monocyte | 5.54e-15 | 59 |
monoblast | 5.54e-15 | 59 |
promonocyte | 5.54e-15 | 59 |
mesenchymal cell | 2.23e-08 | 354 |
connective tissue cell | 8.11e-08 | 361 |
mature alpha-beta T cell | 1.12e-07 | 18 |
alpha-beta T cell | 1.12e-07 | 18 |
immature T cell | 1.12e-07 | 18 |
mature T cell | 1.12e-07 | 18 |
immature alpha-beta T cell | 1.12e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.36e-18 | 98 |
blood island | 4.36e-18 | 98 |
hemolymphoid system | 3.63e-15 | 108 |
bone marrow | 4.43e-14 | 76 |
adult organism | 2.79e-13 | 114 |
bone element | 5.80e-13 | 82 |
skeletal element | 8.51e-12 | 90 |
immune system | 1.13e-11 | 93 |
skeletal system | 2.13e-10 | 100 |
connective tissue | 8.94e-08 | 371 |
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