FFCP PHASE1:Hg19::chr13:28499248..28499267,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C21|description=CAGE_peak_at_chr13:28499248..28499267,+|id=chr13:28499248..28499267,+|ontology_enrichment_celltype=CL:0000080!3.20e-13!6;CL:0002178!1.87e-11!3;CL:0000083!7.00e-09!4|ontology_enrichment_celltype_v019=CL:0002535;1.78e-15;2|ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:3119!7.12e-20!14;DOID:4929!8.93e-17!2;DOID:0060060!1.99e-09!1;DOID:0060061!1.99e-09!1;DOID:8691!1.99e-09!1;DOID:1793!7.00e-09!4;DOID:299!8.63e-08!25|ontology_enrichment_disease_v019=DOID:4362;5.70e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5|ontology_enrichment_uberon=UBERON:0005409!1.21e-29!35;UBERON:0002108!1.24e-18!14;UBERON:0000160!3.42e-17!27;UBERON:0000945!4.90e-16!8;UBERON:0010039!4.90e-16!8;UBERON:0002114!4.88e-10!12;UBERON:0004913!4.15e-09!1;UBERON:0003703!4.15e-09!1;UBERON:0001174!4.15e-09!1;UBERON:0004914!4.15e-09!1;UBERON:0002331!4.00e-08!10;UBERON:0000358!4.00e-08!10;UBERON:0000307!4.00e-08!10;UBERON:0000091!4.00e-08!10;UBERON:0000087!4.00e-08!10;UBERON:0007806!4.00e-08!10;UBERON:0008780!4.00e-08!10;UBERON:0005728!4.00e-08!10;UBERON:0004921!5.32e-08!129;UBERON:0004185!5.32e-08!129;UBERON:0001007!1.94e-07!155;UBERON:0001555!1.94e-07!155;UBERON:0007026!1.94e-07!155|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0006955;1.78e-15;2!UBERON:0004801;1.78e-15;2!UBERON:0000922;5.40e-13;49!UBERON:0000478;1.97e-11;24!UBERON:0002114;9.90e-11;2!UBERON:0002390;7.89e-09;32!UBERON:0002108;6.04e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0000478,1.97e-11,24;UBERON:0002114,9.90e-11,2;UBERON:0002108,6.04e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.442287822516696,0,9.19215498909928,5.06612149680662,7.30953646538188,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0|short_description=p@chr13:28499248..28499267,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr13:28499248..28499267,+ | |||
|id=chr13:28499248..28499267,+ | |||
|ontology_enrichment_celltype=CL:0000080!3.20e-13!6;CL:0002178!1.87e-11!3;CL:0000083!7.00e-09!4 | |||
|ontology_enrichment_celltype_v019=CL:0002535;1.78e-15;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,1.78e-15,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!7.12e-20!14;DOID:4929!8.93e-17!2;DOID:0060060!1.99e-09!1;DOID:0060061!1.99e-09!1;DOID:8691!1.99e-09!1;DOID:1793!7.00e-09!4;DOID:299!8.63e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.70e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.70e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.21e-29!35;UBERON:0002108!1.24e-18!14;UBERON:0000160!3.42e-17!27;UBERON:0000945!4.90e-16!8;UBERON:0010039!4.90e-16!8;UBERON:0002114!4.88e-10!12;UBERON:0004913!4.15e-09!1;UBERON:0003703!4.15e-09!1;UBERON:0001174!4.15e-09!1;UBERON:0004914!4.15e-09!1;UBERON:0002331!4.00e-08!10;UBERON:0000358!4.00e-08!10;UBERON:0000307!4.00e-08!10;UBERON:0000091!4.00e-08!10;UBERON:0000087!4.00e-08!10;UBERON:0007806!4.00e-08!10;UBERON:0008780!4.00e-08!10;UBERON:0005728!4.00e-08!10;UBERON:0004921!5.32e-08!129;UBERON:0004185!5.32e-08!129;UBERON:0001007!1.94e-07!155;UBERON:0001555!1.94e-07!155;UBERON:0007026!1.94e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;2.55e-26;10!UBERON:0000178;7.82e-18;15!UBERON:0000179;7.82e-18;15!UBERON:0000463;7.82e-18;15!UBERON:0006955;1.78e-15;2!UBERON:0004801;1.78e-15;2!UBERON:0000922;5.40e-13;49!UBERON:0000478;1.97e-11;24!UBERON:0002114;9.90e-11;2!UBERON:0002390;7.89e-09;32!UBERON:0002108;6.04e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.55e-26,10;UBERON:0000358,2.55e-26,10;UBERON:0000307,2.55e-26,10;UBERON:0000091,2.55e-26,10;UBERON:0000087,2.55e-26,10;UBERON:0007010,2.55e-26,10;UBERON:0007806,2.55e-26,10;UBERON:0008780,2.55e-26,10;UBERON:0005728,2.55e-26,10;UBERON:0000178,7.82e-18,15;UBERON:0000179,7.82e-18,15;UBERON:0000463,7.82e-18,15;UBERON:0006955,1.78e-15,2;UBERON:0004801,1.78e-15,2;UBERON:0000478,1.97e-11,24;UBERON:0002114,9.90e-11,2;UBERON:0002108,6.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02319297425131,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649165919226273,0,0.442287822516696,0,9.19215498909928,5.06612149680662,7.30953646538188,0,0,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0.114536596165916,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,2.1161073620616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p@chr13:28499248..28499267,+ | |||
}} |
Revision as of 01:53, 11 September 2013
Short description: | p@chr13:28499248..28499267, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:28499248..28499267, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 1.78e-15 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.55e-26 | 10 |
blastocyst | 2.55e-26 | 10 |
blastula | 2.55e-26 | 10 |
bilaminar disc | 2.55e-26 | 10 |
inner cell mass | 2.55e-26 | 10 |
cleaving embryo | 2.55e-26 | 10 |
connecting stalk | 2.55e-26 | 10 |
inner cell mass derived epiblast | 2.55e-26 | 10 |
extraembryonic mesoderm | 2.55e-26 | 10 |
blood | 7.82e-18 | 15 |
haemolymphatic fluid | 7.82e-18 | 15 |
organism substance | 7.82e-18 | 15 |
uterine epithelium | 1.78e-15 | 2 |
cervix epithelium | 1.78e-15 | 2 |
extraembryonic structure | 1.97e-11 | 24 |
duodenum | 9.90e-11 | 2 |
small intestine | 6.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.70e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.