FFCP PHASE1:Hg19::chr13:39564993..39565002,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=161003|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19420|TSSclassifier=S|UniProt=B4E285,Q8TAV4|association_with_transcript=0bp_to_ENST00000423210,NM_001144033,NM_145286,uc001uwx.2,uc010tez.1_5end|coexpression_cluster_id=C81|description=CAGE_peak_2_at_STOML3_5end|id=chr13:39564993..39565002,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008947;2.98e-16;29!UBERON:0001041;1.21e-07;30|ontology_enrichment_disease=DOID:178!1.13e-08!1;DOID:326!1.13e-08!1;DOID:3978!1.13e-08!1;DOID:3394!1.13e-08!1;DOID:5844!1.13e-08!1|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001896!1.86e-22!3;UBERON:0005290!1.86e-22!3;UBERON:0010096!1.86e-22!3;UBERON:0000341!1.60e-16!2;UBERON:0003127!2.35e-16!2;UBERON:0001873!7.88e-16!2;UBERON:0010122!7.88e-16!2;UBERON:0007023!1.98e-15!115;UBERON:0002298!7.18e-15!8;UBERON:0005383!7.30e-11!3;UBERON:0005382!7.30e-11!3;UBERON:0004733!5.64e-10!12;UBERON:0002028!5.64e-10!12;UBERON:0007277!5.64e-10!12;UBERON:0004732!3.22e-09!13;UBERON:0002171!3.87e-09!1;UBERON:0006518!3.87e-09!1;UBERON:0008949!3.87e-09!1;UBERON:0000101!3.87e-09!1;UBERON:0002167!3.87e-09!1;UBERON:0001301!5.70e-09!1;UBERON:0002336!1.42e-08!1;UBERON:0001018!1.42e-08!1;UBERON:0002473!1.42e-08!1;UBERON:0005340!1.42e-08!1;UBERON:0002316!1.42e-08!1;UBERON:0003544!1.42e-08!1;UBERON:0001020!1.42e-08!1;UBERON:0005970!1.42e-08!1;UBERON:0002437!1.42e-08!1;UBERON:0000369!2.31e-08!4;UBERON:0002435!2.31e-08!4;UBERON:0000204!2.31e-08!4;UBERON:0010082!2.31e-08!4;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0002308!5.66e-08!9;UBERON:0000125!5.66e-08!9|ontology_enrichment_uberon_v019=UBERON:0002171;3.99e-50;1!UBERON:0006518;3.99e-50;1!UBERON:0008949;3.99e-50;1!UBERON:0000101;3.99e-50;1!UBERON:0002167;3.99e-50;1!UBERON:0003127;4.32e-26;2!UBERON:0000341;7.14e-26;2!UBERON:0005178;6.83e-11;34!UBERON:0002224;6.83e-11;34!UBERON:0002048;4.74e-10;22!UBERON:0000117;4.74e-10;22!UBERON:0000171;4.74e-10;22!UBERON:0000170;4.74e-10;22!UBERON:0000974;1.44e-09;6!UBERON:0000065;4.12e-09;44!UBERON:0003126;1.89e-08;7!UBERON:0001005;1.89e-08;7!UBERON:0005181;2.63e-08;35!UBERON:0000915;3.80e-07;52|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.58e-50,1;UBERON:0006518,6.58e-50,1;UBERON:0008949,6.58e-50,1;UBERON:0000101,6.58e-50,1;UBERON:0002167,6.58e-50,1;UBERON:0003127,4.32e-26,2;UBERON:0000341,5.56e-26,2;UBERON:0005178,5.47e-14,34;UBERON:0002224,5.47e-14,34;UBERON:0005181,1.29e-13,35;UBERON:0008947,1.29e-12,38;UBERON:0003258,1.29e-12,38;UBERON:0002048,4.96e-10,22;UBERON:0000117,4.96e-10,22;UBERON:0000171,4.96e-10,22;UBERON:0000170,4.96e-10,22;UBERON:0005597,4.96e-10,22;UBERON:0000118,4.96e-10,22;UBERON:0000915,1.83e-09,52;UBERON:0000065,3.82e-09,54;UBERON:0003126,1.89e-08,7;UBERON:0001005,1.89e-08,7;UBERON:0001004,6.78e-07,74|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.432777279484182,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.961086713109252,1.41483874589699,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=161003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19420 | |||
|TSSclassifier=S | |||
|UniProt=B4E285,Q8TAV4 | |||
|association_with_transcript=0bp_to_ENST00000423210,NM_001144033,NM_145286,uc001uwx.2,uc010tez.1_5end | |||
|coexpression_cluster_id=C81 | |||
|description=CAGE_peak_2_at_STOML3_5end | |||
|id=chr13:39564993..39565002,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.98e-16;29!UBERON:0001041;1.21e-07;30 | |||
|ontology_enrichment_disease=DOID:178!1.13e-08!1;DOID:326!1.13e-08!1;DOID:3978!1.13e-08!1;DOID:3394!1.13e-08!1;DOID:5844!1.13e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!1.86e-22!3;UBERON:0005290!1.86e-22!3;UBERON:0010096!1.86e-22!3;UBERON:0000341!1.60e-16!2;UBERON:0003127!2.35e-16!2;UBERON:0001873!7.88e-16!2;UBERON:0010122!7.88e-16!2;UBERON:0007023!1.98e-15!115;UBERON:0002298!7.18e-15!8;UBERON:0005383!7.30e-11!3;UBERON:0005382!7.30e-11!3;UBERON:0004733!5.64e-10!12;UBERON:0002028!5.64e-10!12;UBERON:0007277!5.64e-10!12;UBERON:0004732!3.22e-09!13;UBERON:0002171!3.87e-09!1;UBERON:0006518!3.87e-09!1;UBERON:0008949!3.87e-09!1;UBERON:0000101!3.87e-09!1;UBERON:0002167!3.87e-09!1;UBERON:0001301!5.70e-09!1;UBERON:0002336!1.42e-08!1;UBERON:0001018!1.42e-08!1;UBERON:0002473!1.42e-08!1;UBERON:0005340!1.42e-08!1;UBERON:0002316!1.42e-08!1;UBERON:0003544!1.42e-08!1;UBERON:0001020!1.42e-08!1;UBERON:0005970!1.42e-08!1;UBERON:0002437!1.42e-08!1;UBERON:0000369!2.31e-08!4;UBERON:0002435!2.31e-08!4;UBERON:0000204!2.31e-08!4;UBERON:0010082!2.31e-08!4;UBERON:0003076!5.24e-08!15;UBERON:0003057!5.24e-08!15;UBERON:0002308!5.66e-08!9;UBERON:0000125!5.66e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;3.99e-50;1!UBERON:0006518;3.99e-50;1!UBERON:0008949;3.99e-50;1!UBERON:0000101;3.99e-50;1!UBERON:0002167;3.99e-50;1!UBERON:0003127;4.32e-26;2!UBERON:0000341;7.14e-26;2!UBERON:0005178;6.83e-11;34!UBERON:0002224;6.83e-11;34!UBERON:0002048;4.74e-10;22!UBERON:0000117;4.74e-10;22!UBERON:0000171;4.74e-10;22!UBERON:0000170;4.74e-10;22!UBERON:0000974;1.44e-09;6!UBERON:0000065;4.12e-09;44!UBERON:0003126;1.89e-08;7!UBERON:0001005;1.89e-08;7!UBERON:0005181;2.63e-08;35!UBERON:0000915;3.80e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.58e-50,1;UBERON:0006518,6.58e-50,1;UBERON:0008949,6.58e-50,1;UBERON:0000101,6.58e-50,1;UBERON:0002167,6.58e-50,1;UBERON:0003127,4.32e-26,2;UBERON:0000341,5.56e-26,2;UBERON:0005178,5.47e-14,34;UBERON:0002224,5.47e-14,34;UBERON:0005181,1.29e-13,35;UBERON:0008947,1.29e-12,38;UBERON:0003258,1.29e-12,38;UBERON:0002048,4.96e-10,22;UBERON:0000117,4.96e-10,22;UBERON:0000171,4.96e-10,22;UBERON:0000170,4.96e-10,22;UBERON:0005597,4.96e-10,22;UBERON:0000118,4.96e-10,22;UBERON:0000915,1.83e-09,52;UBERON:0000065,3.82e-09,54;UBERON:0003126,1.89e-08,7;UBERON:0001005,1.89e-08,7;UBERON:0001004,6.78e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0.432777279484182,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.961086713109252,1.41483874589699,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.639701945702943,1.90451545170992,0,0,0,0,0,0,0,0,5.80949863680678,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@STOML3 | |||
}} |
Revision as of 02:10, 11 September 2013
Short description: | p2@STOML3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_STOML3_5end |
Coexpression cluster: | C81_trachea_salivary_throat_aorta_eye_submaxillary_parotid |
Association with transcript: | 0bp_to_ENST00000423210, NM_001144033, NM_145286, uc001uwx.2, uc010tez.1_5end |
EntrezGene: | STOML3 |
HGNC: | 19420 |
UniProt: | B4E285Q8TAV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.58e-50 | 1 |
right lung lobe | 6.58e-50 | 1 |
lower lobe of lung | 6.58e-50 | 1 |
lobe of lung | 6.58e-50 | 1 |
right lung | 6.58e-50 | 1 |
open tracheal system trachea | 4.32e-26 | 2 |
throat | 5.56e-26 | 2 |
thoracic cavity element | 5.47e-14 | 34 |
thoracic cavity | 5.47e-14 | 34 |
thoracic segment organ | 1.29e-13 | 35 |
respiratory primordium | 1.29e-12 | 38 |
endoderm of foregut | 1.29e-12 | 38 |
lung | 4.96e-10 | 22 |
respiratory tube | 4.96e-10 | 22 |
respiration organ | 4.96e-10 | 22 |
pair of lungs | 4.96e-10 | 22 |
lung primordium | 4.96e-10 | 22 |
lung bud | 4.96e-10 | 22 |
thoracic segment of trunk | 1.83e-09 | 52 |
respiratory tract | 3.82e-09 | 54 |
trachea | 1.89e-08 | 7 |
respiratory airway | 1.89e-08 | 7 |
respiratory system | 6.78e-07 | 74 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.