FFCP PHASE1:Hg19::chr15:48937982..48937988,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2200|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3603|TSSclassifier=S|UniProt=F8W7L2,F5H2N7,D2JYH6,P35555|association_with_transcript=0bp_to_ENST00000389087,ENST00000544030,NM_000138_5end|coexpression_cluster_id=C720|description=CAGE_peak_9_at_FBN1_5end|id=chr15:48937982..48937988,-|ontology_enrichment_celltype=CL:0000055!1.84e-27!180;CL:0000057!1.45e-22!75;CL:0000680!1.53e-14!57;CL:0000056!1.53e-14!57;CL:0000355!1.53e-14!57;CL:0000187!7.37e-13!54;CL:0002620!5.19e-12!23;CL:0000183!2.11e-11!59;CL:0002494!2.03e-10!16;CL:0000048!2.04e-10!430;CL:0000393!3.12e-10!60;CL:0000211!3.12e-10!60;CL:0000723!1.18e-09!436;CL:0000034!6.01e-09!444;CL:0000192!2.07e-07!42;CL:0000514!2.07e-07!42;CL:0000222!2.94e-07!119;CL:0002334!9.97e-07!12|ontology_enrichment_celltype_v019=CL:0002334;1.92e-11;12!CL:0002620;3.77e-11;23!CL:0000680;3.87e-08;7!CL:0002580;4.67e-08;3!CL:0002615;1.38e-07;3!CL:0002579;1.38e-07;3!CL:0000057;1.43e-07;73|ontology_enrichment_celltype_v019_2=CL:0000057,3.66e-19,76;CL:0000048,6.96e-15,427;CL:0000723,1.98e-14,433;CL:0000034,7.60e-14,441;CL:0002334,1.08e-11,12;CL:0002620,2.92e-11,23;CL:0000680,6.67e-09,58;CL:0000056,6.67e-09,58;CL:0000355,6.67e-09,58;CL:0002580,3.69e-08,3;CL:0000134,5.11e-08,354;CL:0002579,5.18e-08,3;CL:0002615,1.01e-07,3;CL:0002320,1.30e-07,361;CL:0000187,2.44e-07,55|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;1.49e-12;5!DOID:450;1.49e-12;5!DOID:66;1.49e-12;5!DOID:423;1.49e-12;5!DOID:0080000;1.49e-12;5!DOID:11722;1.49e-12;5|ontology_enrichment_disease_v019_2=DOID:17,1.11e-12,5;DOID:450,1.11e-12,5;DOID:66,1.11e-12,5;DOID:423,1.11e-12,5;DOID:0080000,1.11e-12,5;DOID:11722,1.11e-12,5|ontology_enrichment_uberon=UBERON:0000914!4.49e-15!83;UBERON:0002329!4.49e-15!83;UBERON:0003077!4.49e-15!83;UBERON:0003059!4.49e-15!83;UBERON:0007282!4.49e-15!83;UBERON:0009618!4.49e-15!83;UBERON:0007285!4.49e-15!83;UBERON:0002385!8.36e-15!63;UBERON:0001015!8.36e-15!63;UBERON:0000383!8.36e-15!63;UBERON:0001134!3.03e-14!61;UBERON:0002036!3.03e-14!61;UBERON:0003082!3.03e-14!61;UBERON:0004290!4.36e-13!70;UBERON:0000486!3.09e-11!82;UBERON:0004872!3.18e-10!84;UBERON:0007100!6.18e-09!27;UBERON:0000948!7.42e-09!24;UBERON:0005498!7.42e-09!24;UBERON:0004140!7.42e-09!24;UBERON:0009881!7.42e-09!24;UBERON:0004141!7.42e-09!24;UBERON:0003084!7.42e-09!24;UBERON:0007005!7.42e-09!24;UBERON:0004139!7.42e-09!24;UBERON:0004291!7.42e-09!24;UBERON:0000475!9.60e-08!365;UBERON:0005256!1.06e-07!143;UBERON:0004457!1.06e-07!12;UBERON:0000042!1.06e-07!12;UBERON:0002199!2.52e-07!45;UBERON:0002416!2.52e-07!45;UBERON:0004923!5.26e-07!57;UBERON:0004573!5.87e-07!33;UBERON:0004571!5.87e-07!33|ontology_enrichment_uberon_v019=UBERON:0004457;1.12e-15;9!UBERON:0000042;1.12e-15;9!UBERON:0003688;1.65e-13;6!UBERON:0002358;1.65e-13;6!UBERON:0003684;1.65e-13;6!UBERON:0001178;1.65e-13;6|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.63e-14,6;UBERON:0002358,4.63e-14,6;UBERON:0003684,4.63e-14,6;UBERON:0001178,4.63e-14,6;UBERON:0004457,5.97e-12,12;UBERON:0000042,5.97e-12,12;UBERON:0001134,4.32e-09,62;UBERON:0002036,4.32e-09,62;UBERON:0003082,4.32e-09,62;UBERON:0002385,1.15e-08,64;UBERON:0001015,1.15e-08,64;UBERON:0000383,1.15e-08,64;UBERON:0007524,5.45e-08,73;UBERON:0002384,1.40e-07,371;UBERON:0000486,2.02e-07,83;UBERON:0002329,2.27e-07,71;UBERON:0003059,2.27e-07,71;UBERON:0007282,2.27e-07,71;UBERON:0004290,2.27e-07,71;UBERON:0009618,2.27e-07,71;UBERON:0003077,3.31e-07,72;UBERON:0007285,3.31e-07,72|phase1_expression=0.363356758541113,0.428201047781966,1.69145284915165,1.0007329835313,1.78784437770915,0,0,0.631719873426831,0.522371256399677,0,0,0.218441372130172,0.791300934685361,0.247532705920093,0.662794751455832,0,0,0.730310090387373,0.487932798790507,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.511450247374121,0.722878304769133,0,1.30361867064741,0,1.94653948121054,1.03988298880475,0.443458794925128,1.05401742831751,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0.112611480483322,0,0,0,0,0,0,1.49091585508596,0.633152558322899,1.85372853138506,12.0471380714502,2.12801029319014,1.12135520028461,1.06748995729705,0.49333509683432,0.622422070799533,0.538842688278752,0.980771418680752,0.302714855289863,1.15235184896,0.234321431833797,0,0,0.149448680551801,0.23486899728753,0.647491777472526,0.280901613404497,0.204154171254893,0,0.309977343527296,1.18800285728205,0.741800787835671,0,0,0.336672227908132,0.625592599359821,0,1.31693286264251,0.612975591598039,1.05166641234618,0.340296549480063,3.7671823494661,1.49490172172997,1.69545520927649,5.70173082560364,1.1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,0|short_description=p9@FBN1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2200 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3603 | |||
|TSSclassifier=S | |||
|UniProt=F8W7L2,F5H2N7,D2JYH6,P35555 | |||
|association_with_transcript=0bp_to_ENST00000389087,ENST00000544030,NM_000138_5end | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_9_at_FBN1_5end | |||
|id=chr15:48937982..48937988,- | |||
|ontology_enrichment_celltype=CL:0000055!1.84e-27!180;CL:0000057!1.45e-22!75;CL:0000680!1.53e-14!57;CL:0000056!1.53e-14!57;CL:0000355!1.53e-14!57;CL:0000187!7.37e-13!54;CL:0002620!5.19e-12!23;CL:0000183!2.11e-11!59;CL:0002494!2.03e-10!16;CL:0000048!2.04e-10!430;CL:0000393!3.12e-10!60;CL:0000211!3.12e-10!60;CL:0000723!1.18e-09!436;CL:0000034!6.01e-09!444;CL:0000192!2.07e-07!42;CL:0000514!2.07e-07!42;CL:0000222!2.94e-07!119;CL:0002334!9.97e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.92e-11;12!CL:0002620;3.77e-11;23!CL:0000680;3.87e-08;7!CL:0002580;4.67e-08;3!CL:0002615;1.38e-07;3!CL:0002579;1.38e-07;3!CL:0000057;1.43e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.66e-19,76;CL:0000048,6.96e-15,427;CL:0000723,1.98e-14,433;CL:0000034,7.60e-14,441;CL:0002334,1.08e-11,12;CL:0002620,2.92e-11,23;CL:0000680,6.67e-09,58;CL:0000056,6.67e-09,58;CL:0000355,6.67e-09,58;CL:0002580,3.69e-08,3;CL:0000134,5.11e-08,354;CL:0002579,5.18e-08,3;CL:0002615,1.01e-07,3;CL:0002320,1.30e-07,361;CL:0000187,2.44e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.49e-12;5!DOID:450;1.49e-12;5!DOID:66;1.49e-12;5!DOID:423;1.49e-12;5!DOID:0080000;1.49e-12;5!DOID:11722;1.49e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.11e-12,5;DOID:450,1.11e-12,5;DOID:66,1.11e-12,5;DOID:423,1.11e-12,5;DOID:0080000,1.11e-12,5;DOID:11722,1.11e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!4.49e-15!83;UBERON:0002329!4.49e-15!83;UBERON:0003077!4.49e-15!83;UBERON:0003059!4.49e-15!83;UBERON:0007282!4.49e-15!83;UBERON:0009618!4.49e-15!83;UBERON:0007285!4.49e-15!83;UBERON:0002385!8.36e-15!63;UBERON:0001015!8.36e-15!63;UBERON:0000383!8.36e-15!63;UBERON:0001134!3.03e-14!61;UBERON:0002036!3.03e-14!61;UBERON:0003082!3.03e-14!61;UBERON:0004290!4.36e-13!70;UBERON:0000486!3.09e-11!82;UBERON:0004872!3.18e-10!84;UBERON:0007100!6.18e-09!27;UBERON:0000948!7.42e-09!24;UBERON:0005498!7.42e-09!24;UBERON:0004140!7.42e-09!24;UBERON:0009881!7.42e-09!24;UBERON:0004141!7.42e-09!24;UBERON:0003084!7.42e-09!24;UBERON:0007005!7.42e-09!24;UBERON:0004139!7.42e-09!24;UBERON:0004291!7.42e-09!24;UBERON:0000475!9.60e-08!365;UBERON:0005256!1.06e-07!143;UBERON:0004457!1.06e-07!12;UBERON:0000042!1.06e-07!12;UBERON:0002199!2.52e-07!45;UBERON:0002416!2.52e-07!45;UBERON:0004923!5.26e-07!57;UBERON:0004573!5.87e-07!33;UBERON:0004571!5.87e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.12e-15;9!UBERON:0000042;1.12e-15;9!UBERON:0003688;1.65e-13;6!UBERON:0002358;1.65e-13;6!UBERON:0003684;1.65e-13;6!UBERON:0001178;1.65e-13;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.63e-14,6;UBERON:0002358,4.63e-14,6;UBERON:0003684,4.63e-14,6;UBERON:0001178,4.63e-14,6;UBERON:0004457,5.97e-12,12;UBERON:0000042,5.97e-12,12;UBERON:0001134,4.32e-09,62;UBERON:0002036,4.32e-09,62;UBERON:0003082,4.32e-09,62;UBERON:0002385,1.15e-08,64;UBERON:0001015,1.15e-08,64;UBERON:0000383,1.15e-08,64;UBERON:0007524,5.45e-08,73;UBERON:0002384,1.40e-07,371;UBERON:0000486,2.02e-07,83;UBERON:0002329,2.27e-07,71;UBERON:0003059,2.27e-07,71;UBERON:0007282,2.27e-07,71;UBERON:0004290,2.27e-07,71;UBERON:0009618,2.27e-07,71;UBERON:0003077,3.31e-07,72;UBERON:0007285,3.31e-07,72 | |||
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| |||
|short_description=p9@FBN1 | |||
}} |
Revision as of 07:16, 11 September 2013
Short description: | p9@FBN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_FBN1_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | 0bp_to_ENST00000389087, ENST00000544030, NM_000138_5end |
EntrezGene: | FBN1 |
HGNC: | 3603 |
UniProt: | F8W7L2F5H2N7D2JYH6P35555 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.66e-19 | 76 |
multi fate stem cell | 6.96e-15 | 427 |
somatic stem cell | 1.98e-14 | 433 |
stem cell | 7.60e-14 | 441 |
preadipocyte | 1.08e-11 | 12 |
skin fibroblast | 2.92e-11 | 23 |
muscle precursor cell | 6.67e-09 | 58 |
myoblast | 6.67e-09 | 58 |
multi-potent skeletal muscle stem cell | 6.67e-09 | 58 |
preadipocyte of the breast | 3.69e-08 | 3 |
mesenchymal cell | 5.11e-08 | 354 |
omentum preadipocyte | 5.18e-08 | 3 |
adipocyte of omentum tissue | 1.01e-07 | 3 |
connective tissue cell | 1.30e-07 | 361 |
muscle cell | 2.44e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.63e-14 | 6 |
peritoneum | 4.63e-14 | 6 |
abdominal cavity | 4.63e-14 | 6 |
visceral peritoneum | 4.63e-14 | 6 |
cavity lining | 5.97e-12 | 12 |
serous membrane | 5.97e-12 | 12 |
skeletal muscle tissue | 4.32e-09 | 62 |
striated muscle tissue | 4.32e-09 | 62 |
myotome | 4.32e-09 | 62 |
muscle tissue | 1.15e-08 | 64 |
musculature | 1.15e-08 | 64 |
musculature of body | 1.15e-08 | 64 |
dense mesenchyme tissue | 5.45e-08 | 73 |
connective tissue | 1.40e-07 | 371 |
multilaminar epithelium | 2.02e-07 | 83 |
somite | 2.27e-07 | 71 |
presomitic mesoderm | 2.27e-07 | 71 |
presumptive segmental plate | 2.27e-07 | 71 |
dermomyotome | 2.27e-07 | 71 |
trunk paraxial mesoderm | 2.27e-07 | 71 |
paraxial mesoderm | 3.31e-07 | 72 |
presumptive paraxial mesoderm | 3.31e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.11e-12 | 5 |
myotonic disease | 1.11e-12 | 5 |
muscle tissue disease | 1.11e-12 | 5 |
myopathy | 1.11e-12 | 5 |
muscular disease | 1.11e-12 | 5 |
myotonic dystrophy | 1.11e-12 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.