FFCP PHASE1:Hg19::chr17:42466942..42466947,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3674|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6138|TSSclassifier=S|UniProt=P08514|association_with_transcript=-69bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end|coexpression_cluster_id=C212|description=CAGE_peak_6_at_ITGA2B_5end|id=chr17:42466942..42466947,-|ontology_enrichment_celltype=CL:0000763!6.44e-19!112;CL:0000049!6.44e-19!112;CL:0002032!7.32e-13!165;CL:0000837!7.32e-13!165;CL:0000764!1.84e-12!2;CL:0000765!1.84e-12!2;CL:0000050!1.84e-12!2;CL:0000038!1.84e-12!2;CL:0000558!1.84e-12!2;CL:0000547!1.84e-12!2;CL:0000549!1.84e-12!2;CL:0000550!1.84e-12!2;CL:0000552!1.84e-12!2;CL:0000037!3.72e-12!172;CL:0000566!3.72e-12!172;CL:0002274!1.73e-11!5;CL:0000457!1.73e-11!5;CL:0002191!1.73e-11!5;CL:0000097!1.73e-11!5;CL:0000831!1.73e-11!5;CL:0002028!1.73e-11!5;CL:0000988!3.06e-11!182;CL:0000767!8.03e-09!3|ontology_enrichment_celltype_v019=CL:0000097;2.00e-12;5!CL:0000763;2.52e-08;100!CL:0000163;2.68e-07;9|ontology_enrichment_celltype_v019_2=CL:0000763,1.16e-14,108;CL:0000049,1.16e-14,108;CL:0000097,1.89e-12,5;CL:0002028,1.89e-12,5;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000037,6.92e-11,168;CL:0000988,2.87e-10,177;CL:0000163,2.60e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:8692!2.18e-30!31;DOID:1240!1.38e-27!39;DOID:2531!2.06e-20!51;DOID:0060083!2.06e-20!51;DOID:1036!3.39e-12!8;DOID:8552!1.36e-07!1;DOID:9119!1.63e-07!1|ontology_enrichment_disease_v019=DOID:8692;5.06e-35;31!DOID:1240;7.97e-26;39!DOID:2531;6.27e-19;51!DOID:0060083;6.27e-19;51!DOID:8552;1.07e-15;1!DOID:9119;1.78e-15;1!DOID:1036;3.32e-08;8|ontology_enrichment_disease_v019_2=DOID:8692,3.82e-36,31;DOID:1240,2.57e-35,39;DOID:2531,8.34e-27,51;DOID:0060083,8.34e-27,51;DOID:8552,1.16e-15,1;DOID:9119,1.78e-15,1;DOID:0050686,2.89e-09,137;DOID:1036,3.38e-08,8|ontology_enrichment_uberon=UBERON:0000178!8.54e-10!15;UBERON:0000179!8.54e-10!15;UBERON:0000463!8.54e-10!15|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,6.25143881493905,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,1.94541993357815,0,0,0,0,0,0,0,0,0,1.99579371432817,0.383010740264733,0,0,1.40398589056729,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,4.8682022125677,2.66457574398256,9.86909035614947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,4.48771541130422,0.225595660617181,0,0,0,9.6951313178031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94331031418972,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50019889020571,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@ITGA2B}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3674 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6138 | |||
|TSSclassifier=S | |||
|UniProt=P08514 | |||
|association_with_transcript=-69bp_to_ENST00000262407,ENST00000353281,NM_000419,uc002igt.1_5end | |||
|coexpression_cluster_id=C212 | |||
|description=CAGE_peak_6_at_ITGA2B_5end | |||
|id=chr17:42466942..42466947,- | |||
|ontology_enrichment_celltype=CL:0000763!6.44e-19!112;CL:0000049!6.44e-19!112;CL:0002032!7.32e-13!165;CL:0000837!7.32e-13!165;CL:0000764!1.84e-12!2;CL:0000765!1.84e-12!2;CL:0000050!1.84e-12!2;CL:0000038!1.84e-12!2;CL:0000558!1.84e-12!2;CL:0000547!1.84e-12!2;CL:0000549!1.84e-12!2;CL:0000550!1.84e-12!2;CL:0000552!1.84e-12!2;CL:0000037!3.72e-12!172;CL:0000566!3.72e-12!172;CL:0002274!1.73e-11!5;CL:0000457!1.73e-11!5;CL:0002191!1.73e-11!5;CL:0000097!1.73e-11!5;CL:0000831!1.73e-11!5;CL:0002028!1.73e-11!5;CL:0000988!3.06e-11!182;CL:0000767!8.03e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.00e-12;5!CL:0000763;2.52e-08;100!CL:0000163;2.68e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.16e-14,108;CL:0000049,1.16e-14,108;CL:0000097,1.89e-12,5;CL:0002028,1.89e-12,5;CL:0002032,2.06e-11,161;CL:0000837,2.06e-11,161;CL:0000037,6.92e-11,168;CL:0000988,2.87e-10,177;CL:0000163,2.60e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.18e-30!31;DOID:1240!1.38e-27!39;DOID:2531!2.06e-20!51;DOID:0060083!2.06e-20!51;DOID:1036!3.39e-12!8;DOID:8552!1.36e-07!1;DOID:9119!1.63e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.06e-35;31!DOID:1240;7.97e-26;39!DOID:2531;6.27e-19;51!DOID:0060083;6.27e-19;51!DOID:8552;1.07e-15;1!DOID:9119;1.78e-15;1!DOID:1036;3.32e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.82e-36,31;DOID:1240,2.57e-35,39;DOID:2531,8.34e-27,51;DOID:0060083,8.34e-27,51;DOID:8552,1.16e-15,1;DOID:9119,1.78e-15,1;DOID:0050686,2.89e-09,137;DOID:1036,3.38e-08,8 | |||
|ontology_enrichment_uberon=UBERON:0000178!8.54e-10!15;UBERON:0000179!8.54e-10!15;UBERON:0000463!8.54e-10!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,6.25143881493905,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.411362273086194,1.94541993357815,0,0,0,0,0,0,0,0,0,1.99579371432817,0.383010740264733,0,0,1.40398589056729,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,4.8682022125677,2.66457574398256,9.86909035614947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511572370226872,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,4.48771541130422,0.225595660617181,0,0,0,9.6951313178031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94331031418972,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.50019889020571,0,0.113312091520126,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@ITGA2B | |||
}} |
Revision as of 13:54, 11 September 2013
Short description: | p6@ITGA2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ITGA2B_5end |
Coexpression cluster: | C212_chronic_acute_Whole_Reticulocytes_leukemia_blood_CD34 |
Association with transcript: | -69bp_to_ENST00000262407, ENST00000353281, NM_000419, uc002igt.1_5end |
EntrezGene: | ITGA2B |
HGNC: | 6138 |
UniProt: | P08514 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.16e-14 | 108 |
common myeloid progenitor | 1.16e-14 | 108 |
mast cell | 1.89e-12 | 5 |
basophil mast progenitor cell | 1.89e-12 | 5 |
hematopoietic oligopotent progenitor cell | 2.06e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.06e-11 | 161 |
hematopoietic stem cell | 6.92e-11 | 168 |
hematopoietic cell | 2.87e-10 | 177 |
endocrine cell | 2.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.82e-36 | 31 |
leukemia | 2.57e-35 | 39 |
hematologic cancer | 8.34e-27 | 51 |
immune system cancer | 8.34e-27 | 51 |
chronic myeloid leukemia | 1.16e-15 | 1 |
acute myeloid leukemia | 1.78e-15 | 1 |
organ system cancer | 2.89e-09 | 137 |
chronic leukemia | 3.38e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.