FFCP PHASE1:Hg19::chr17:73308205..73308208,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1003|description=CAGE_peak_at_chr17:73308205..73308208,-|id=chr17:73308205..73308208,-|ontology_enrichment_celltype=CL:0000766!2.46e-50!76;CL:0000839!5.03e-45!70;CL:0000557!3.92e-44!71;CL:0002057!4.55e-44!42;CL:0002194!6.30e-44!63;CL:0000576!6.30e-44!63;CL:0000040!6.30e-44!63;CL:0000559!6.30e-44!63;CL:0002009!4.72e-42!65;CL:0000860!3.61e-40!45;CL:0000763!4.94e-37!112;CL:0000049!4.94e-37!112;CL:0000738!1.22e-34!140;CL:0000037!4.41e-32!172;CL:0000566!4.41e-32!172;CL:0002087!9.95e-32!119;CL:0002031!1.53e-30!124;CL:0002032!7.03e-30!165;CL:0000837!7.03e-30!165;CL:0000988!7.43e-30!182;CL:0002393!8.53e-12!9;CL:0002397!8.53e-12!9|ontology_enrichment_celltype_v019=CL:0000860;3.36e-52;33!CL:0002057;3.36e-52;33!CL:0000473;6.94e-39;39!CL:0000234;6.94e-39;39!CL:0000576;4.96e-37;48!CL:0000766;7.84e-30;69!CL:0000763;1.07e-13;100!CL:0002087;5.81e-10;104!CL:0000738;3.44e-09;136!CL:0002393;9.97e-08;6!CL:0002397;9.97e-08;6|ontology_enrichment_celltype_v019_2=CL:0000860,5.42e-62,42;CL:0002057,5.42e-62,42;CL:0000473,1.84e-58,48;CL:0000234,1.84e-58,48;CL:0000766,4.80e-54,72;CL:0002194,1.41e-53,59;CL:0000576,1.41e-53,59;CL:0000040,1.41e-53,59;CL:0000559,1.41e-53,59;CL:0002009,1.17e-51,61;CL:0000839,4.64e-51,66;CL:0000557,3.22e-50,67;CL:0000763,4.64e-34,108;CL:0000049,4.64e-34,108;CL:0000738,9.36e-28,136;CL:0002087,6.67e-27,115;CL:0002031,1.60e-25,120;CL:0000037,3.05e-21,168;CL:0002032,8.63e-21,161;CL:0000837,8.63e-21,161;CL:0000988,7.85e-20,177;CL:0002393,1.31e-08,9;CL:0002397,1.31e-08,9|ontology_enrichment_development_v019=CL:0002057;8.15e-46;42!CL:0000049;3.34e-13;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.08e-54!102;UBERON:0003061!7.08e-54!102;UBERON:0002193!7.88e-52!112;UBERON:0002371!2.38e-40!80;UBERON:0001474!3.09e-36!86;UBERON:0004765!2.45e-29!101;UBERON:0001434!2.45e-29!101;UBERON:0002405!6.13e-29!115;UBERON:0003081!2.00e-18!216;UBERON:0000178!2.10e-15!15;UBERON:0000179!2.10e-15!15;UBERON:0000463!2.10e-15!15;UBERON:0007023!7.89e-14!115;UBERON:0002204!4.75e-13!167|ontology_enrichment_uberon_v019=UBERON:0000178;5.05e-32;15!UBERON:0000179;5.05e-32;15!UBERON:0000463;5.05e-32;15!UBERON:0002390;4.89e-13;32!UBERON:0002193;1.93e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.52e-65,98;UBERON:0003061,6.52e-65,98;UBERON:0002193,2.67e-58,108;UBERON:0002371,1.25e-43,76;UBERON:0001474,4.96e-40,82;UBERON:0004765,5.71e-36,90;UBERON:0002405,1.26e-34,93;UBERON:0000178,5.37e-32,15;UBERON:0000179,5.37e-32,15;UBERON:0000463,5.37e-32,15;UBERON:0001434,8.50e-32,100;UBERON:0003081,9.14e-28,203;UBERON:0002204,4.01e-18,167;UBERON:0000926,2.00e-16,315;UBERON:0004120,2.00e-16,315;UBERON:0006603,2.00e-16,315|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0.154934401160603,0,0.293600439334847,0.553995408531877,1.20326668482085,1.51907609501096,1.11957737119962,0,0.257575567634187,3.48955773070955,1.13362783106643,1.94067248950253,2.09186133215116,2.46700732813095,0,1.1507695692886,2.56160706529101,0.47296445977717,1.03423704220986,0,0,1.31769637679823,2.45615535052061,2.9214052977861,1.83650335422542,1.28371610830437,1.27867425159808,1.31940520074686,2.39356389145958,1.70489900213078,0.870627715885752,0.56738522469114,1.86846674698672,0.75374599577023,0.521482918420201,1.52032191293582,0,0.368277635987565,0.949387162322653,0.422510572623884,1.06302149982522,0.209658645508376,2.13424399178341,0.600707571366025,0.32145117339416,0.570025487482497,1.19350006319454,0.182664153764634,0,0,0,0.853460445133014,0.800791974072025,0,0.661044872784862,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0.950452044448374,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,1.19245312152671,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,3.9534125230819,0,0,0,0,0.264818361626438,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,1.00883967391873,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0.591092280605782,0,0,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1003 | |||
|description=CAGE_peak_at_chr17:73308205..73308208,- | |||
|id=chr17:73308205..73308208,- | |||
|ontology_enrichment_celltype=CL:0000766!2.46e-50!76;CL:0000839!5.03e-45!70;CL:0000557!3.92e-44!71;CL:0002057!4.55e-44!42;CL:0002194!6.30e-44!63;CL:0000576!6.30e-44!63;CL:0000040!6.30e-44!63;CL:0000559!6.30e-44!63;CL:0002009!4.72e-42!65;CL:0000860!3.61e-40!45;CL:0000763!4.94e-37!112;CL:0000049!4.94e-37!112;CL:0000738!1.22e-34!140;CL:0000037!4.41e-32!172;CL:0000566!4.41e-32!172;CL:0002087!9.95e-32!119;CL:0002031!1.53e-30!124;CL:0002032!7.03e-30!165;CL:0000837!7.03e-30!165;CL:0000988!7.43e-30!182;CL:0002393!8.53e-12!9;CL:0002397!8.53e-12!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-52;33!CL:0002057;3.36e-52;33!CL:0000473;6.94e-39;39!CL:0000234;6.94e-39;39!CL:0000576;4.96e-37;48!CL:0000766;7.84e-30;69!CL:0000763;1.07e-13;100!CL:0002087;5.81e-10;104!CL:0000738;3.44e-09;136!CL:0002393;9.97e-08;6!CL:0002397;9.97e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.42e-62,42;CL:0002057,5.42e-62,42;CL:0000473,1.84e-58,48;CL:0000234,1.84e-58,48;CL:0000766,4.80e-54,72;CL:0002194,1.41e-53,59;CL:0000576,1.41e-53,59;CL:0000040,1.41e-53,59;CL:0000559,1.41e-53,59;CL:0002009,1.17e-51,61;CL:0000839,4.64e-51,66;CL:0000557,3.22e-50,67;CL:0000763,4.64e-34,108;CL:0000049,4.64e-34,108;CL:0000738,9.36e-28,136;CL:0002087,6.67e-27,115;CL:0002031,1.60e-25,120;CL:0000037,3.05e-21,168;CL:0002032,8.63e-21,161;CL:0000837,8.63e-21,161;CL:0000988,7.85e-20,177;CL:0002393,1.31e-08,9;CL:0002397,1.31e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;8.15e-46;42!CL:0000049;3.34e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.08e-54!102;UBERON:0003061!7.08e-54!102;UBERON:0002193!7.88e-52!112;UBERON:0002371!2.38e-40!80;UBERON:0001474!3.09e-36!86;UBERON:0004765!2.45e-29!101;UBERON:0001434!2.45e-29!101;UBERON:0002405!6.13e-29!115;UBERON:0003081!2.00e-18!216;UBERON:0000178!2.10e-15!15;UBERON:0000179!2.10e-15!15;UBERON:0000463!2.10e-15!15;UBERON:0007023!7.89e-14!115;UBERON:0002204!4.75e-13!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.05e-32;15!UBERON:0000179;5.05e-32;15!UBERON:0000463;5.05e-32;15!UBERON:0002390;4.89e-13;32!UBERON:0002193;1.93e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.52e-65,98;UBERON:0003061,6.52e-65,98;UBERON:0002193,2.67e-58,108;UBERON:0002371,1.25e-43,76;UBERON:0001474,4.96e-40,82;UBERON:0004765,5.71e-36,90;UBERON:0002405,1.26e-34,93;UBERON:0000178,5.37e-32,15;UBERON:0000179,5.37e-32,15;UBERON:0000463,5.37e-32,15;UBERON:0001434,8.50e-32,100;UBERON:0003081,9.14e-28,203;UBERON:0002204,4.01e-18,167;UBERON:0000926,2.00e-16,315;UBERON:0004120,2.00e-16,315;UBERON:0006603,2.00e-16,315 | |||
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|short_description=p@chr17:73308205..73308208,- | |||
}} |
Revision as of 15:38, 11 September 2013
Short description: | p@chr17:73308205..73308208, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:73308205..73308208, - |
Coexpression cluster: | C1003_CD14_Whole_Neutrophils_Macrophage_Eosinophils_blood_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.42e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.42e-62 | 42 |
defensive cell | 1.84e-58 | 48 |
phagocyte | 1.84e-58 | 48 |
myeloid leukocyte | 4.80e-54 | 72 |
monopoietic cell | 1.41e-53 | 59 |
monocyte | 1.41e-53 | 59 |
monoblast | 1.41e-53 | 59 |
promonocyte | 1.41e-53 | 59 |
macrophage dendritic cell progenitor | 1.17e-51 | 61 |
myeloid lineage restricted progenitor cell | 4.64e-51 | 66 |
granulocyte monocyte progenitor cell | 3.22e-50 | 67 |
myeloid cell | 4.64e-34 | 108 |
common myeloid progenitor | 4.64e-34 | 108 |
leukocyte | 9.36e-28 | 136 |
nongranular leukocyte | 6.67e-27 | 115 |
hematopoietic lineage restricted progenitor cell | 1.60e-25 | 120 |
hematopoietic stem cell | 3.05e-21 | 168 |
hematopoietic oligopotent progenitor cell | 8.63e-21 | 161 |
hematopoietic multipotent progenitor cell | 8.63e-21 | 161 |
hematopoietic cell | 7.85e-20 | 177 |
intermediate monocyte | 1.31e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.31e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.52e-65 | 98 |
blood island | 6.52e-65 | 98 |
hemolymphoid system | 2.67e-58 | 108 |
bone marrow | 1.25e-43 | 76 |
bone element | 4.96e-40 | 82 |
skeletal element | 5.71e-36 | 90 |
immune system | 1.26e-34 | 93 |
blood | 5.37e-32 | 15 |
haemolymphatic fluid | 5.37e-32 | 15 |
organism substance | 5.37e-32 | 15 |
skeletal system | 8.50e-32 | 100 |
lateral plate mesoderm | 9.14e-28 | 203 |
musculoskeletal system | 4.01e-18 | 167 |
mesoderm | 2.00e-16 | 315 |
mesoderm-derived structure | 2.00e-16 | 315 |
presumptive mesoderm | 2.00e-16 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.