FFCP PHASE1:Hg19::chr18:33046982..33046991,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C381|description=CAGE_peak_at_chr18:33046982..33046991,-|id=chr18:33046982..33046991,-|ontology_enrichment_celltype=CL:0002139!1.35e-78!24;CL:0000071!1.06e-63!18;CL:0002546!1.06e-63!18;CL:0000115!2.55e-62!35;CL:0002078!2.75e-48!44;CL:1000413!2.20e-36!9;CL:0000213!7.58e-36!57;CL:0000215!7.58e-36!57;CL:0002544!5.39e-25!6;CL:0002543!1.50e-17!6;CL:0000222!8.34e-17!119;CL:0005020!1.61e-16!6;CL:0002138!1.61e-16!6;CL:0005022!1.61e-16!6;CL:0000076!2.05e-15!62;CL:0002618!1.21e-13!3;CL:0002144!2.23e-13!3;CL:0002545!1.67e-09!2|ontology_enrichment_celltype_v019=CL:0000071;1.03e-149;18!CL:0002139;1.27e-139;24!CL:0000115;3.71e-95;36!CL:1000413;5.11e-84;9!CL:0002544;5.36e-57;6!CL:0002078;1.91e-54;45!CL:0000213;9.12e-44;58!CL:0000215;9.12e-44;58!CL:0002543;7.23e-40;6!CL:0002618;5.32e-30;3!CL:0002144;2.77e-29;3!CL:0000076;2.78e-24;63!CL:0002545;3.17e-20;2!CL:0002138;3.68e-07;6|ontology_enrichment_celltype_v019_2=CL:0000071,8.63e-150,18;CL:0002546,8.63e-150,18;CL:0002139,1.28e-139,24;CL:0000115,5.52e-113,36;CL:0002078,6.70e-90,45;CL:1000413,4.66e-84,9;CL:0000213,3.43e-69,58;CL:0000215,3.43e-69,58;CL:0002544,5.92e-57,6;CL:0000076,4.01e-41,63;CL:0002543,8.16e-40,6;CL:0000222,8.50e-32,121;CL:0002618,5.07e-30,3;CL:0002144,2.18e-29,3;CL:0002545,3.02e-20,2;CL:0002321,8.66e-14,250;CL:0000066,1.01e-13,253;CL:0005020,3.92e-07,6;CL:0002138,3.92e-07,6;CL:0005022,3.92e-07,6|ontology_enrichment_development_v019=CL:0002546;1.03e-149;18!CL:0000222;1.22e-14;121!CL:0005022;3.68e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!1.06e-63!18;UBERON:0004638!1.06e-63!18;UBERON:0004852!1.06e-63!18;UBERON:0000487!2.57e-51!22;UBERON:0006914!1.25e-44!25;UBERON:0003915!2.20e-36!9;UBERON:0004700!2.20e-36!9;UBERON:0001917!2.20e-36!9;UBERON:0000055!1.65e-28!69;UBERON:0002049!4.05e-24!79;UBERON:0007798!4.05e-24!79;UBERON:0001981!2.15e-20!60;UBERON:0007500!2.15e-20!60;UBERON:0004537!2.15e-20!60;UBERON:0006965!2.15e-20!60;UBERON:0004535!2.15e-20!110;UBERON:0001009!1.13e-19!113;UBERON:0004872!3.37e-18!84;UBERON:0003914!2.22e-15!118;UBERON:0001915!2.23e-13!3;UBERON:0001982!2.23e-13!3;UBERON:0001473!2.57e-12!8;UBERON:0004536!2.57e-12!8;UBERON:0006558!2.57e-12!8;UBERON:0000490!3.77e-12!138;UBERON:0001638!1.38e-11!9;UBERON:0003920!1.38e-11!9;UBERON:0004582!1.38e-11!9;UBERON:0004111!3.91e-11!241;UBERON:0000477!1.80e-10!286;UBERON:0002465!8.62e-10!10;UBERON:0005800!1.67e-09!2;UBERON:0001515!1.67e-09!2;UBERON:0000947!9.68e-09!21;UBERON:0010191!9.68e-09!21;UBERON:0000341!1.56e-08!2;UBERON:0002066!2.44e-08!5;UBERON:0001637!6.77e-08!42;UBERON:0003509!6.77e-08!42;UBERON:0004572!6.77e-08!42;UBERON:0000025!9.63e-08!194|ontology_enrichment_uberon_v019=UBERON:0004638;1.03e-149;18!UBERON:0001986;1.03e-149;18!UBERON:0004852;1.03e-149;18!UBERON:0000487;4.30e-122;22!UBERON:0006914;3.56e-107;25!UBERON:0003915;5.11e-84;9!UBERON:0004700;5.11e-84;9!UBERON:0001917;5.11e-84;9!UBERON:0000490;5.79e-73;33!UBERON:0007500;1.92e-34;56!UBERON:0001981;1.92e-34;56!UBERON:0004537;1.92e-34;56!UBERON:0010523;2.77e-29;3!UBERON:0001915;2.77e-29;3!UBERON:0001982;2.77e-29;3!UBERON:0000055;1.91e-28;65!UBERON:0001638;1.35e-26;9!UBERON:0003920;1.35e-26;9!UBERON:0004582;1.35e-26;9!UBERON:0003914;3.38e-23;74!UBERON:0005800;3.17e-20;2!UBERON:0001515;3.17e-20;2!UBERON:0002066;2.87e-18;5!UBERON:0002049;5.97e-18;75!UBERON:0007798;5.97e-18;75!UBERON:0001637;1.66e-16;42!UBERON:0003509;1.66e-16;42!UBERON:0004572;1.66e-16;42!UBERON:0000947;4.52e-16;21!UBERON:0010191;4.52e-16;21!UBERON:0000025;9.11e-15;93!UBERON:0001009;4.78e-14;112!UBERON:0004535;1.93e-11;109!UBERON:0004573;1.79e-10;33!UBERON:0004571;1.79e-10;33!UBERON:0010260;2.13e-10;9!UBERON:0004111;3.25e-09;130!UBERON:0000483;3.83e-08;136!UBERON:0000119;5.62e-08;139|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.63e-150,18;UBERON:0001986,8.63e-150,18;UBERON:0004852,8.63e-150,18;UBERON:0000487,3.71e-122,22;UBERON:0006914,3.14e-107,25;UBERON:0003915,4.66e-84,9;UBERON:0004700,4.66e-84,9;UBERON:0001917,4.66e-84,9;UBERON:0000055,4.37e-53,68;UBERON:0007500,1.25e-49,59;UBERON:0001981,1.25e-49,59;UBERON:0004537,1.25e-49,59;UBERON:0006965,1.25e-49,59;UBERON:0002049,6.01e-46,78;UBERON:0007798,6.01e-46,78;UBERON:0004872,1.52e-34,83;UBERON:0004535,4.00e-32,109;UBERON:0001009,3.43e-31,112;UBERON:0010523,2.18e-29,3;UBERON:0001915,2.18e-29,3;UBERON:0001982,2.18e-29,3;UBERON:0003914,1.27e-26,117;UBERON:0001638,1.47e-26,9;UBERON:0003920,1.47e-26,9;UBERON:0004582,1.47e-26,9;UBERON:0005800,3.02e-20,2;UBERON:0001515,3.02e-20,2;UBERON:0002066,2.79e-18,5;UBERON:0000490,3.34e-18,148;UBERON:0001637,3.77e-17,42;UBERON:0003509,3.77e-17,42;UBERON:0004572,3.77e-17,42;UBERON:0000947,4.64e-16,21;UBERON:0010191,4.64e-16,21;UBERON:0000025,4.85e-15,192;UBERON:0004111,1.49e-14,240;UBERON:0003081,4.48e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C381 | |||
|description=CAGE_peak_at_chr18:33046982..33046991,- | |||
|id=chr18:33046982..33046991,- | |||
|ontology_enrichment_celltype=CL:0002139!1.35e-78!24;CL:0000071!1.06e-63!18;CL:0002546!1.06e-63!18;CL:0000115!2.55e-62!35;CL:0002078!2.75e-48!44;CL:1000413!2.20e-36!9;CL:0000213!7.58e-36!57;CL:0000215!7.58e-36!57;CL:0002544!5.39e-25!6;CL:0002543!1.50e-17!6;CL:0000222!8.34e-17!119;CL:0005020!1.61e-16!6;CL:0002138!1.61e-16!6;CL:0005022!1.61e-16!6;CL:0000076!2.05e-15!62;CL:0002618!1.21e-13!3;CL:0002144!2.23e-13!3;CL:0002545!1.67e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.03e-149;18!CL:0002139;1.27e-139;24!CL:0000115;3.71e-95;36!CL:1000413;5.11e-84;9!CL:0002544;5.36e-57;6!CL:0002078;1.91e-54;45!CL:0000213;9.12e-44;58!CL:0000215;9.12e-44;58!CL:0002543;7.23e-40;6!CL:0002618;5.32e-30;3!CL:0002144;2.77e-29;3!CL:0000076;2.78e-24;63!CL:0002545;3.17e-20;2!CL:0002138;3.68e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.63e-150,18;CL:0002546,8.63e-150,18;CL:0002139,1.28e-139,24;CL:0000115,5.52e-113,36;CL:0002078,6.70e-90,45;CL:1000413,4.66e-84,9;CL:0000213,3.43e-69,58;CL:0000215,3.43e-69,58;CL:0002544,5.92e-57,6;CL:0000076,4.01e-41,63;CL:0002543,8.16e-40,6;CL:0000222,8.50e-32,121;CL:0002618,5.07e-30,3;CL:0002144,2.18e-29,3;CL:0002545,3.02e-20,2;CL:0002321,8.66e-14,250;CL:0000066,1.01e-13,253;CL:0005020,3.92e-07,6;CL:0002138,3.92e-07,6;CL:0005022,3.92e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;1.03e-149;18!CL:0000222;1.22e-14;121!CL:0005022;3.68e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.06e-63!18;UBERON:0004638!1.06e-63!18;UBERON:0004852!1.06e-63!18;UBERON:0000487!2.57e-51!22;UBERON:0006914!1.25e-44!25;UBERON:0003915!2.20e-36!9;UBERON:0004700!2.20e-36!9;UBERON:0001917!2.20e-36!9;UBERON:0000055!1.65e-28!69;UBERON:0002049!4.05e-24!79;UBERON:0007798!4.05e-24!79;UBERON:0001981!2.15e-20!60;UBERON:0007500!2.15e-20!60;UBERON:0004537!2.15e-20!60;UBERON:0006965!2.15e-20!60;UBERON:0004535!2.15e-20!110;UBERON:0001009!1.13e-19!113;UBERON:0004872!3.37e-18!84;UBERON:0003914!2.22e-15!118;UBERON:0001915!2.23e-13!3;UBERON:0001982!2.23e-13!3;UBERON:0001473!2.57e-12!8;UBERON:0004536!2.57e-12!8;UBERON:0006558!2.57e-12!8;UBERON:0000490!3.77e-12!138;UBERON:0001638!1.38e-11!9;UBERON:0003920!1.38e-11!9;UBERON:0004582!1.38e-11!9;UBERON:0004111!3.91e-11!241;UBERON:0000477!1.80e-10!286;UBERON:0002465!8.62e-10!10;UBERON:0005800!1.67e-09!2;UBERON:0001515!1.67e-09!2;UBERON:0000947!9.68e-09!21;UBERON:0010191!9.68e-09!21;UBERON:0000341!1.56e-08!2;UBERON:0002066!2.44e-08!5;UBERON:0001637!6.77e-08!42;UBERON:0003509!6.77e-08!42;UBERON:0004572!6.77e-08!42;UBERON:0000025!9.63e-08!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.03e-149;18!UBERON:0001986;1.03e-149;18!UBERON:0004852;1.03e-149;18!UBERON:0000487;4.30e-122;22!UBERON:0006914;3.56e-107;25!UBERON:0003915;5.11e-84;9!UBERON:0004700;5.11e-84;9!UBERON:0001917;5.11e-84;9!UBERON:0000490;5.79e-73;33!UBERON:0007500;1.92e-34;56!UBERON:0001981;1.92e-34;56!UBERON:0004537;1.92e-34;56!UBERON:0010523;2.77e-29;3!UBERON:0001915;2.77e-29;3!UBERON:0001982;2.77e-29;3!UBERON:0000055;1.91e-28;65!UBERON:0001638;1.35e-26;9!UBERON:0003920;1.35e-26;9!UBERON:0004582;1.35e-26;9!UBERON:0003914;3.38e-23;74!UBERON:0005800;3.17e-20;2!UBERON:0001515;3.17e-20;2!UBERON:0002066;2.87e-18;5!UBERON:0002049;5.97e-18;75!UBERON:0007798;5.97e-18;75!UBERON:0001637;1.66e-16;42!UBERON:0003509;1.66e-16;42!UBERON:0004572;1.66e-16;42!UBERON:0000947;4.52e-16;21!UBERON:0010191;4.52e-16;21!UBERON:0000025;9.11e-15;93!UBERON:0001009;4.78e-14;112!UBERON:0004535;1.93e-11;109!UBERON:0004573;1.79e-10;33!UBERON:0004571;1.79e-10;33!UBERON:0010260;2.13e-10;9!UBERON:0004111;3.25e-09;130!UBERON:0000483;3.83e-08;136!UBERON:0000119;5.62e-08;139 | |||
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|short_description=p@chr18:33046982..33046991,- | |||
}} |
Revision as of 17:20, 11 September 2013
Short description: | p@chr18:33046982..33046991, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:33046982..33046991, - |
Coexpression cluster: | C381_Endothelial_Renal_Hepatic_Lymphatic_Fibroblast_squamous_esophagus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.63e-150 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.63e-150 | 18 |
endothelial cell of vascular tree | 1.28e-139 | 24 |
endothelial cell | 5.52e-113 | 36 |
meso-epithelial cell | 6.70e-90 | 45 |
endothelial cell of artery | 4.66e-84 | 9 |
lining cell | 3.43e-69 | 58 |
barrier cell | 3.43e-69 | 58 |
aortic endothelial cell | 5.92e-57 | 6 |
squamous epithelial cell | 4.01e-41 | 63 |
vein endothelial cell | 8.16e-40 | 6 |
mesodermal cell | 8.50e-32 | 121 |
endothelial cell of umbilical vein | 5.07e-30 | 3 |
capillary endothelial cell | 2.18e-29 | 3 |
thoracic aorta endothelial cell | 3.02e-20 | 2 |
embryonic cell | 8.66e-14 | 250 |
epithelial cell | 1.01e-13 | 253 |
lymphangioblast | 3.92e-07 | 6 |
endothelial cell of lymphatic vessel | 3.92e-07 | 6 |
vascular lymphangioblast | 3.92e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.