FFCP PHASE1:Hg19::chr18:59274103..59274117,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:59274103..59274117,-|id=chr18:59274103..59274117,-|ontology_enrichment_celltype=CL:0002321!2.99e-14!248;CL:0002371!3.03e-14!591;CL:0000220!4.93e-14!246;CL:0000144!3.49e-13!625;CL:0000055!1.44e-12!180;CL:0000548!1.70e-10!679;CL:0000004!1.70e-10!679;CL:0000255!1.70e-10!679;CL:0000012!3.18e-10!682;CL:0000003!8.07e-10!722;CL:0002159!1.98e-09!13;CL:0000057!1.40e-08!75;CL:0000222!1.18e-07!119;CL:0002620!1.40e-07!23|ontology_enrichment_celltype_v019=CL:0000244;8.80e-14;4!CL:0000731;8.80e-14;4!CL:0002262;2.27e-12;2!CL:1000398;2.27e-12;2!CL:0002540;2.67e-09;6!CL:0000708;8.22e-09;3!CL:0002621;8.22e-09;3!CL:0000228;5.12e-07;1!CL:0002372;5.12e-07;1|ontology_enrichment_celltype_v019_2=CL:0000244,8.30e-14,4;CL:0000731,8.30e-14,4;CL:0002262,2.57e-12,2;CL:1000398,2.57e-12,2;CL:0002540,4.15e-09,6;CL:0002621,7.20e-09,3;CL:0000708,1.02e-08,3;CL:0000228,5.14e-07,1;CL:0002372,5.14e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!1.89e-10!79;UBERON:0007798!1.89e-10!79;UBERON:0003102!1.11e-09!95;UBERON:0004535!1.39e-09!110;UBERON:0000119!2.63e-09!312;UBERON:0001009!5.62e-09!113;UBERON:0000475!1.08e-08!365;UBERON:0000483!3.62e-08!309;UBERON:0002097!8.71e-08!40;UBERON:0000914!1.34e-07!83;UBERON:0002329!1.34e-07!83;UBERON:0003077!1.34e-07!83;UBERON:0003059!1.34e-07!83;UBERON:0007282!1.34e-07!83;UBERON:0009618!1.34e-07!83;UBERON:0007285!1.34e-07!83;UBERON:0002199!1.36e-07!45;UBERON:0002416!1.36e-07!45;UBERON:0000486!1.72e-07!82;UBERON:0000055!2.62e-07!69;UBERON:0000468!4.51e-07!659;UBERON:0005256!4.92e-07!143;UBERON:0000353!7.19e-07!17|ontology_enrichment_uberon_v019=UBERON:0001281;2.27e-12;2!UBERON:0003497;2.27e-12;2!UBERON:0003909;2.27e-12;2!UBERON:0003835;2.27e-12;2!UBERON:0000486;4.64e-12;12!UBERON:0000365;3.98e-11;5!UBERON:0005911;5.22e-11;36!UBERON:0005910;2.38e-09;6!UBERON:0003210;8.22e-09;3!UBERON:0001949;8.22e-09;3!UBERON:0001280;1.55e-08;3!UBERON:0004647;1.55e-08;3!UBERON:0003929;4.92e-08;7!UBERON:0003350;4.41e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.57e-12,2;UBERON:0003497,2.57e-12,2;UBERON:0003909,2.57e-12,2;UBERON:0003835,2.57e-12,2;UBERON:0000365,3.80e-11,5;UBERON:0005910,2.29e-09,6;UBERON:0001949,7.20e-09,3;UBERON:0003210,1.02e-08,3;UBERON:0001280,1.68e-08,3;UBERON:0004647,1.68e-08,3;UBERON:0005171,1.68e-08,3;UBERON:0000486,8.86e-08,83;UBERON:0003350,4.86e-07,8|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0.672325146451775,0,0,0,0.61560529038394,0.408001382488506,0,0,0.273748850145768,0.251085279189606,0,0,0,0,0,0,1.83884244895785,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.175669571386252,0,0.728590576585084,0.370784442784429,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,0.838998872419812,0,0.626984899610432,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0.450445921933289,0,0.949265659568129,0.549605231791222,0,0,0.436094052142534,0,0.12663051166458,0.132409180813219,0,0,0,0,0.24666754841716,0,0.134710672069688,0.163461903113459,1.05950199351452,0,0.234321431833797,0,0,0,0.939475989150119,1.61872944368132,1.54495887372473,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0.910161361938026,0,0.336672227908132,0.875829639103749,0.831192346452549,0,0.30648779579902,0.150238058906597,0.113432183160021,0.538168907066586,0.213557388818567,0.211931901159562,1.80054657650641,0,0.257640540045629,0,0.675105328965065,0.0974370051611986,0.757301322732344,0,0.161646056818812,1.42003837006646,0.403008392910561,0.67824236924195,1.54608682530637,2.18196896472668,0.573609190778008,0.243947412259191,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,2.24803506515239,0.201057944823262,0.740707561268237,0,0,0,0.115930404975077,0.117408694235822,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0.93733833986777,0.671928512795438,1.84307626415102,0.179117045405697,1.16253575405585,1.53353071666084,0,0,0,0,0,0,0,0,1.71072446022705,0.102827492703324,0,0,2.35475277125258,1.30788020649984,0.95339771567235,0,0,0,0.26593811658487,1.04007436911366,2.05765899409714,1.41849132023278,1.0656887160644,0,0,0.823240336780769,0.325736184293735,0,0.791951872933429,0,0,0,0,0,0,0.958499421966331,0,1.42636905040718,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0.154209693802656,0.177561725313127,0.082127156013809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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr18:59274103..59274117,- | |||
|id=chr18:59274103..59274117,- | |||
|ontology_enrichment_celltype=CL:0002321!2.99e-14!248;CL:0002371!3.03e-14!591;CL:0000220!4.93e-14!246;CL:0000144!3.49e-13!625;CL:0000055!1.44e-12!180;CL:0000548!1.70e-10!679;CL:0000004!1.70e-10!679;CL:0000255!1.70e-10!679;CL:0000012!3.18e-10!682;CL:0000003!8.07e-10!722;CL:0002159!1.98e-09!13;CL:0000057!1.40e-08!75;CL:0000222!1.18e-07!119;CL:0002620!1.40e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000244;8.80e-14;4!CL:0000731;8.80e-14;4!CL:0002262;2.27e-12;2!CL:1000398;2.27e-12;2!CL:0002540;2.67e-09;6!CL:0000708;8.22e-09;3!CL:0002621;8.22e-09;3!CL:0000228;5.12e-07;1!CL:0002372;5.12e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.30e-14,4;CL:0000731,8.30e-14,4;CL:0002262,2.57e-12,2;CL:1000398,2.57e-12,2;CL:0002540,4.15e-09,6;CL:0002621,7.20e-09,3;CL:0000708,1.02e-08,3;CL:0000228,5.14e-07,1;CL:0002372,5.14e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.89e-10!79;UBERON:0007798!1.89e-10!79;UBERON:0003102!1.11e-09!95;UBERON:0004535!1.39e-09!110;UBERON:0000119!2.63e-09!312;UBERON:0001009!5.62e-09!113;UBERON:0000475!1.08e-08!365;UBERON:0000483!3.62e-08!309;UBERON:0002097!8.71e-08!40;UBERON:0000914!1.34e-07!83;UBERON:0002329!1.34e-07!83;UBERON:0003077!1.34e-07!83;UBERON:0003059!1.34e-07!83;UBERON:0007282!1.34e-07!83;UBERON:0009618!1.34e-07!83;UBERON:0007285!1.34e-07!83;UBERON:0002199!1.36e-07!45;UBERON:0002416!1.36e-07!45;UBERON:0000486!1.72e-07!82;UBERON:0000055!2.62e-07!69;UBERON:0000468!4.51e-07!659;UBERON:0005256!4.92e-07!143;UBERON:0000353!7.19e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.27e-12;2!UBERON:0003497;2.27e-12;2!UBERON:0003909;2.27e-12;2!UBERON:0003835;2.27e-12;2!UBERON:0000486;4.64e-12;12!UBERON:0000365;3.98e-11;5!UBERON:0005911;5.22e-11;36!UBERON:0005910;2.38e-09;6!UBERON:0003210;8.22e-09;3!UBERON:0001949;8.22e-09;3!UBERON:0001280;1.55e-08;3!UBERON:0004647;1.55e-08;3!UBERON:0003929;4.92e-08;7!UBERON:0003350;4.41e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.57e-12,2;UBERON:0003497,2.57e-12,2;UBERON:0003909,2.57e-12,2;UBERON:0003835,2.57e-12,2;UBERON:0000365,3.80e-11,5;UBERON:0005910,2.29e-09,6;UBERON:0001949,7.20e-09,3;UBERON:0003210,1.02e-08,3;UBERON:0001280,1.68e-08,3;UBERON:0004647,1.68e-08,3;UBERON:0005171,1.68e-08,3;UBERON:0000486,8.86e-08,83;UBERON:0003350,4.86e-07,8 | |||
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| |||
|short_description=p@chr18:59274103..59274117,- | |||
}} |
Revision as of 17:56, 11 September 2013
Short description: | p@chr18:59274103..59274117, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:59274103..59274117, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.30e-14 | 4 |
urothelial cell | 8.30e-14 | 4 |
endothelial cell of sinusoid | 2.57e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.57e-12 | 2 |
mesenchymal stem cell of the bone marrow | 4.15e-09 | 6 |
gingival epithelial cell | 7.20e-09 | 3 |
leptomeningeal cell | 1.02e-08 | 3 |
multinucleate cell | 5.14e-07 | 1 |
myotube | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.57e-12 | 2 |
abdomen blood vessel | 2.57e-12 | 2 |
sinusoid | 2.57e-12 | 2 |
abdominal segment blood vessel | 2.57e-12 | 2 |
urothelium | 3.80e-11 | 5 |
transitional epithelium | 2.29e-09 | 6 |
gingival epithelium | 7.20e-09 | 3 |
blood-cerebrospinal fluid barrier | 1.02e-08 | 3 |
liver parenchyma | 1.68e-08 | 3 |
liver lobule | 1.68e-08 | 3 |
hepatic duct | 1.68e-08 | 3 |
multilaminar epithelium | 8.86e-08 | 83 |
epithelium of mucosa | 4.86e-07 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.