FFCP PHASE1:Hg19::chr19:3061397..3061419,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=166|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=307|TSSclassifier=S|UniProt=Q08117|association_with_transcript=-151bp_to_X73358_5end|description=CAGE_peak_12_at_AES_5end|id=chr19:3061397..3061419,-|ontology_enrichment_celltype=CL:0000192!1.60e-10!42;CL:0000514!1.60e-10!42;CL:0000055!9.98e-10!180;CL:0000183!1.19e-08!59;CL:0000680!1.80e-08!57;CL:0000056!1.80e-08!57;CL:0000355!1.80e-08!57;CL:0000187!2.15e-08!54;CL:0000359!4.50e-08!32;CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60|ontology_enrichment_celltype_v019=CL:0000359;1.74e-09;32!CL:0000192;2.43e-09;43!CL:0000791;8.72e-09;18!CL:0000789;8.72e-09;18!CL:0002419;8.72e-09;18|ontology_enrichment_celltype_v019_2=CL:0000192,1.07e-12,43;CL:0000514,1.07e-12,43;CL:0000187,7.61e-10,55;CL:0000359,1.05e-09,32;CL:0000791,2.17e-09,18;CL:0000789,2.17e-09,18;CL:0002420,2.17e-09,18;CL:0002419,2.17e-09,18;CL:0000790,2.17e-09,18;CL:0000680,8.39e-09,58;CL:0000056,8.39e-09,58;CL:0000355,8.39e-09,58;CL:0000393,6.99e-08,61;CL:0000211,6.99e-08,61;CL:0000625,5.00e-07,11|ontology_enrichment_development_v019=CL:0000514;2.43e-09;43!CL:0000790;8.72e-09;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0000486!1.23e-10!82;UBERON:0004290!5.93e-10!70;UBERON:0001637!7.82e-09!42;UBERON:0003509!7.82e-09!42;UBERON:0004572!7.82e-09!42;UBERON:0002385!1.55e-08!63;UBERON:0001015!1.55e-08!63;UBERON:0000383!1.55e-08!63;UBERON:0001134!3.48e-08!61;UBERON:0002036!3.48e-08!61;UBERON:0003082!3.48e-08!61;UBERON:0004573!5.63e-08!33;UBERON:0004571!5.63e-08!33;UBERON:0005256!5.94e-07!143;UBERON:0002100!8.69e-07!216|ontology_enrichment_uberon_v019=UBERON:0004573;8.04e-08;33!UBERON:0004571;8.04e-08;33|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.49e-09,73;UBERON:0000486,2.61e-09,83;UBERON:0002329,2.77e-09,71;UBERON:0003059,2.77e-09,71;UBERON:0007282,2.77e-09,71;UBERON:0004290,2.77e-09,71;UBERON:0009618,2.77e-09,71;UBERON:0007503,4.04e-09,78;UBERON:0003077,5.42e-09,72;UBERON:0007285,5.42e-09,72;UBERON:0002385,1.72e-08,64;UBERON:0001015,1.72e-08,64;UBERON:0000383,1.72e-08,64;UBERON:0004573,2.79e-08,33;UBERON:0004571,2.79e-08,33;UBERON:0001134,2.91e-08,62;UBERON:0002036,2.91e-08,62;UBERON:0003082,2.91e-08,62;UBERON:0001637,7.89e-08,42;UBERON:0003509,7.89e-08,42;UBERON:0004572,7.89e-08,42;UBERON:0005256,7.30e-07,122|phase1_expression=1.45342703416445,0.856402095563933,1.26858963686374,1.0007329835313,2.23480547213644,0.872338524100369,2.53299878168311,0,0,1.96587149201207,3.48900583986214,0.873765488520689,0.527533956456907,1.11389717664042,3.31397375727916,1.34465029290355,0.602694528023977,2.19093027116212,1.95173119516203,0.246242116153576,2.24400760368678,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0.619264493264304,0.919421224478927,2.10844143144775,1.47901604066715,0,0,0.293600439334847,0,1.20326668482085,0.651032612147555,0.223915474239924,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,2.66852776159066,0.853460445133014,2.80277190925209,0.574752439954483,0,0,0.569212969109448,1.76171156811282,1.52909291250092,0,0,0,2.55722701147983,5.89516144123747,4.5232329779892,2.67498392625085,1.62961133316795,4.73447805734733,5.84480185223734,2.89667187901451,0.589211814949674,2.87994062958707,0.541607727530031,10.247305578054,6.24284868287415,5.09757504271396,4.69795030235942,2.31842468588042,3.26230438956533,3.74557159325598,7.31748666634838,2.60611488204402,4.98186641682498,3.77990190030893,0.506039384039006,2.54852331459277,1.30216690771284,3.8018081777935,1.80690142893327,2.8157054453972,1.24930726552346,2.8413270245282,0.821127996921047,1.81446068902259,2.94184215361858,1.30341963494519,2.43806866313962,0,0.639312809217652,1.44575660953827,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0.221729397462564,0,0.458426764241994,1.45718115317017,1.85392221392215,0.649094787309367,0.696518949197069,0.531831842075461,0.238490624305342,0.571994910780128,0,0.79504962946682,1.72046919021225,0.694281003215189,2.82653970962005,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,1.06729878806013,0,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,2.43042584364528,0.17859945656816,0,0.112611480483322,0,0.949265659568129,1.28241220751285,0,0,0.87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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=307 | |||
|TSSclassifier=S | |||
|UniProt=Q08117 | |||
|association_with_transcript=-151bp_to_X73358_5end | |||
|description=CAGE_peak_12_at_AES_5end | |||
|id=chr19:3061397..3061419,- | |||
|ontology_enrichment_celltype=CL:0000192!1.60e-10!42;CL:0000514!1.60e-10!42;CL:0000055!9.98e-10!180;CL:0000183!1.19e-08!59;CL:0000680!1.80e-08!57;CL:0000056!1.80e-08!57;CL:0000355!1.80e-08!57;CL:0000187!2.15e-08!54;CL:0000359!4.50e-08!32;CL:0000791!1.23e-07!18;CL:0000789!1.23e-07!18;CL:0002420!1.23e-07!18;CL:0002419!1.23e-07!18;CL:0000790!1.23e-07!18;CL:0000393!7.45e-07!60;CL:0000211!7.45e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.74e-09;32!CL:0000192;2.43e-09;43!CL:0000791;8.72e-09;18!CL:0000789;8.72e-09;18!CL:0002419;8.72e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.07e-12,43;CL:0000514,1.07e-12,43;CL:0000187,7.61e-10,55;CL:0000359,1.05e-09,32;CL:0000791,2.17e-09,18;CL:0000789,2.17e-09,18;CL:0002420,2.17e-09,18;CL:0002419,2.17e-09,18;CL:0000790,2.17e-09,18;CL:0000680,8.39e-09,58;CL:0000056,8.39e-09,58;CL:0000355,8.39e-09,58;CL:0000393,6.99e-08,61;CL:0000211,6.99e-08,61;CL:0000625,5.00e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000514;2.43e-09;43!CL:0000790;8.72e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.37e-11!83;UBERON:0002329!1.37e-11!83;UBERON:0003077!1.37e-11!83;UBERON:0003059!1.37e-11!83;UBERON:0007282!1.37e-11!83;UBERON:0009618!1.37e-11!83;UBERON:0007285!1.37e-11!83;UBERON:0000486!1.23e-10!82;UBERON:0004290!5.93e-10!70;UBERON:0001637!7.82e-09!42;UBERON:0003509!7.82e-09!42;UBERON:0004572!7.82e-09!42;UBERON:0002385!1.55e-08!63;UBERON:0001015!1.55e-08!63;UBERON:0000383!1.55e-08!63;UBERON:0001134!3.48e-08!61;UBERON:0002036!3.48e-08!61;UBERON:0003082!3.48e-08!61;UBERON:0004573!5.63e-08!33;UBERON:0004571!5.63e-08!33;UBERON:0005256!5.94e-07!143;UBERON:0002100!8.69e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.04e-08;33!UBERON:0004571;8.04e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.49e-09,73;UBERON:0000486,2.61e-09,83;UBERON:0002329,2.77e-09,71;UBERON:0003059,2.77e-09,71;UBERON:0007282,2.77e-09,71;UBERON:0004290,2.77e-09,71;UBERON:0009618,2.77e-09,71;UBERON:0007503,4.04e-09,78;UBERON:0003077,5.42e-09,72;UBERON:0007285,5.42e-09,72;UBERON:0002385,1.72e-08,64;UBERON:0001015,1.72e-08,64;UBERON:0000383,1.72e-08,64;UBERON:0004573,2.79e-08,33;UBERON:0004571,2.79e-08,33;UBERON:0001134,2.91e-08,62;UBERON:0002036,2.91e-08,62;UBERON:0003082,2.91e-08,62;UBERON:0001637,7.89e-08,42;UBERON:0003509,7.89e-08,42;UBERON:0004572,7.89e-08,42;UBERON:0005256,7.30e-07,122 | |||
|phase1_expression=1.45342703416445,0.856402095563933,1.26858963686374,1.0007329835313,2.23480547213644,0.872338524100369,2.53299878168311,0,0,1.96587149201207,3.48900583986214,0.873765488520689,0.527533956456907,1.11389717664042,3.31397375727916,1.34465029290355,0.602694528023977,2.19093027116212,1.95173119516203,0.246242116153576,2.24400760368678,0.626909442956176,0.286235987131057,0.136874425072884,0.251085279189606,0.229240217243854,0.246301768349837,0.157421562627358,0,0,0.619264493264304,0.919421224478927,2.10844143144775,1.47901604066715,0,0,0.293600439334847,0,1.20326668482085,0.651032612147555,0.223915474239924,0,0.257575567634187,0.145398238779565,0.377875943688809,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0.521482918420201,0,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0,0,0,2.66852776159066,0.853460445133014,2.80277190925209,0.574752439954483,0,0,0.569212969109448,1.76171156811282,1.52909291250092,0,0,0,2.55722701147983,5.89516144123747,4.5232329779892,2.67498392625085,1.62961133316795,4.73447805734733,5.84480185223734,2.89667187901451,0.589211814949674,2.87994062958707,0.541607727530031,10.247305578054,6.24284868287415,5.09757504271396,4.69795030235942,2.31842468588042,3.26230438956533,3.74557159325598,7.31748666634838,2.60611488204402,4.98186641682498,3.77990190030893,0.506039384039006,2.54852331459277,1.30216690771284,3.8018081777935,1.80690142893327,2.8157054453972,1.24930726552346,2.8413270245282,0.821127996921047,1.81446068902259,2.94184215361858,1.30341963494519,2.43806866313962,0,0.639312809217652,1.44575660953827,0.50133791063589,0.869079113764942,0,0.486634870302636,0,0.221729397462564,0,0.458426764241994,1.45718115317017,1.85392221392215,0.649094787309367,0.696518949197069,0.531831842075461,0.238490624305342,0.571994910780128,0,0.79504962946682,1.72046919021225,0.694281003215189,2.82653970962005,0.838998872419812,0.275118041940067,0.835979866147242,0.258416759169329,1.06729878806013,0,0.402829317109147,0.760272105718513,0.732186172644509,0.367663080345869,2.43042584364528,0.17859945656816,0,0.112611480483322,0,0.949265659568129,1.28241220751285,0,0,0.872188104285069,0.496971951695318,0.506522046658319,0.264818361626438,0.286836620748814,3.19201543978521,1.12135520028461,1.06748995729705,0.49333509683432,0.933633106199299,0.269421344139376,0,0,1.72852777344,0.937285727335186,1.5608003841516,3.99330275081114,0.747243402759005,0.704606991862589,0.647491777472526,0.561803226808994,1.22492502752936,1.10550885580591,2.58314452939414,1.18800285728205,1.97813543422845,1.82032272387605,4.31170885089743,0.841680569770331,1.00094815897571,1.10825646193673,2.19488810440419,0.612975591598039,1.35214253015937,0.453728732640084,0.358779271377724,1.06778694409284,0.635795703478686,0.300091096084402,1.44273540933814,0.257640540045629,1.48893485065272,0.337552664482532,1.16924406193438,0.252433774244115,1.01254888506529,1.61646056818812,0.355009592516614,1.41052937518696,1.01736355386293,1.73934767846967,0.818238361772504,2.00763216772303,0,0.397589304964456,0.232387885739037,0.10366105501537,0,0,1.56449532329816,3.21620469096443,1.38134921352481,4.17931135228781,3.60939740834793,0,0,0,0,0.217879444092406,0,0,0,0,0.738155454624648,0,2.057870056657,2.94017422771084,0,0,0,0,0.245976877086227,0,0.439001141634502,0,1.20634766893957,1.01847289674383,0.325808305310325,2.07986957055916,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0.93733833986777,0.335964256397719,0.425325291727159,0.268675568108545,0.871901815541886,0.383382679165211,0,0.088048434013226,0.207328115540772,0.576479813667846,0.6312121671319,0.317489471460845,1.14596527667483,0,3.4214489204541,0.514137463516618,0.300343057843917,1.71495859578347,0.224262168690721,0,0.1466765716419,0.258543431515556,3.57656445851882,0,0.797814349754612,3.12022310734098,0.771622122786426,1.41849132023278,0.532844358032199,0.57191197463259,2.17048642156577,1.64648067356154,0,0.710783897485092,0.791951872933429,0.301439377059586,3.48613383440118,0.899756920638513,0,0,0,0.239624855491583,0,0,0.579125226670317,0.821905290201534,0.716243852959582,0.224170287987055,2.75843064282698,3.45004119775228,1.02674429023799,0.254094624222463,0,0,0.335032530668698,0.637938751653163,0,0,0.414415513436035,0.981531933753119,3.00102312635806,1.62759014219841,2.70362119990049,2.3195768543631,1.73472656537328,1.7571212248907,0.902838299183157,2.27407504055985,0,0.664225598535437,0,1.30325421702124,0.979005787313703,0.686286847621712,0.620304078368662,0.431428401637234,3.30855429190677,0,0,0.907170879989041,0.992431231275107,0.153461973288062,0.280660094433074,0.896974044789907,2.04682899626681,0.64341568457443,2.96836132889982,0.616838775210622,0.710246901252508,0.739144404124282,2.07701771673448,0.813472649219715,0,2.00506470303285,0.460404944679482,0.229628896329213,1.0925470080403,1.048995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| |||
|short_description=p12@AES | |||
}} |
Revision as of 19:53, 11 September 2013
Short description: | p12@AES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_AES_5end |
Coexpression cluster: | NA |
Association with transcript: | -151bp_to_X73358_5end |
EntrezGene: | AES |
HGNC: | 307 |
UniProt: | Q08117 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.07e-12 | 43 |
smooth muscle myoblast | 1.07e-12 | 43 |
muscle cell | 7.61e-10 | 55 |
vascular associated smooth muscle cell | 1.05e-09 | 32 |
mature alpha-beta T cell | 2.17e-09 | 18 |
alpha-beta T cell | 2.17e-09 | 18 |
immature T cell | 2.17e-09 | 18 |
mature T cell | 2.17e-09 | 18 |
immature alpha-beta T cell | 2.17e-09 | 18 |
muscle precursor cell | 8.39e-09 | 58 |
myoblast | 8.39e-09 | 58 |
multi-potent skeletal muscle stem cell | 8.39e-09 | 58 |
electrically responsive cell | 6.99e-08 | 61 |
electrically active cell | 6.99e-08 | 61 |
CD8-positive, alpha-beta T cell | 5.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 2.49e-09 | 73 |
multilaminar epithelium | 2.61e-09 | 83 |
somite | 2.77e-09 | 71 |
presomitic mesoderm | 2.77e-09 | 71 |
presumptive segmental plate | 2.77e-09 | 71 |
dermomyotome | 2.77e-09 | 71 |
trunk paraxial mesoderm | 2.77e-09 | 71 |
epithelial vesicle | 4.04e-09 | 78 |
paraxial mesoderm | 5.42e-09 | 72 |
presumptive paraxial mesoderm | 5.42e-09 | 72 |
muscle tissue | 1.72e-08 | 64 |
musculature | 1.72e-08 | 64 |
musculature of body | 1.72e-08 | 64 |
systemic artery | 2.79e-08 | 33 |
systemic arterial system | 2.79e-08 | 33 |
skeletal muscle tissue | 2.91e-08 | 62 |
striated muscle tissue | 2.91e-08 | 62 |
myotome | 2.91e-08 | 62 |
artery | 7.89e-08 | 42 |
arterial blood vessel | 7.89e-08 | 42 |
arterial system | 7.89e-08 | 42 |
trunk mesenchyme | 7.30e-07 | 122 |
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