FFCP PHASE1:Hg19::chr19:6710715..6710743,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=718|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1318|TSSclassifier=N|UniProt=|association_with_transcript=224bp_to_ENST00000466344_5end|coexpression_cluster_id=C5|description=CAGE_peak_15_at_C3_5end|id=chr19:6710715..6710743,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000453;9.59e-27;5!CL:0000990;5.53e-15;8!CL:0000451;2.68e-12;10!CL:0002591;1.68e-09;1!CL:0000182;4.31e-07;12|ontology_enrichment_celltype_v019_2=CL:0000453,9.61e-27,5;CL:0000990,5.54e-15,8;CL:0000451,2.68e-12,10;CL:0002591,2.46e-09,1;CL:0000182,4.31e-07,12|ontology_enrichment_development_v019=UBERON:0010227;8.17e-10;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.16e-15!115;UBERON:0007100!2.85e-09!27;UBERON:0003103!2.20e-08!69;UBERON:0000948!4.66e-07!24;UBERON:0005498!4.66e-07!24;UBERON:0004140!4.66e-07!24;UBERON:0009881!4.66e-07!24;UBERON:0004141!4.66e-07!24;UBERON:0003084!4.66e-07!24;UBERON:0007005!4.66e-07!24;UBERON:0004139!4.66e-07!24;UBERON:0004291!4.66e-07!24;UBERON:0002107!8.53e-07!19;UBERON:0006925!8.53e-07!19;UBERON:0008836!8.53e-07!19|ontology_enrichment_uberon_v019=UBERON:0002081;5.28e-18;2!UBERON:0004151;2.54e-12;3!UBERON:0002107;2.62e-11;19!UBERON:0006925;2.62e-11;19!UBERON:0002134;6.31e-10;1!UBERON:0005208;6.31e-10;1!UBERON:0004145;6.31e-10;1!UBERON:0005946;6.31e-10;1!UBERON:0005965;6.31e-10;1!UBERON:0002078;6.31e-10;1!UBERON:0002079;8.17e-10;1!UBERON:0002365;1.43e-09;31!UBERON:0002330;1.43e-09;31!UBERON:0002423;1.52e-08;25|ontology_enrichment_uberon_v019_2=UBERON:0002081,6.27e-18,2;UBERON:0010227,6.27e-18,2;UBERON:0004151,2.85e-12,3;UBERON:0004145,5.28e-12,3;UBERON:0002107,2.62e-11,19;UBERON:0006925,2.62e-11,19;UBERON:0008836,2.62e-11,19;UBERON:0002134,6.31e-10,1;UBERON:0005208,6.31e-10,1;UBERON:0005946,6.31e-10,1;UBERON:0005965,6.31e-10,1;UBERON:0002078,6.31e-10,1;UBERON:0008835,9.70e-10,22;UBERON:0003894,9.70e-10,22;UBERON:0002079,9.70e-10,1;UBERON:0002365,1.56e-09,31;UBERON:0002330,1.56e-09,31;UBERON:0009854,2.62e-09,23;UBERON:0007499,1.52e-08,25;UBERON:0009497,1.52e-08,25;UBERON:0000015,1.52e-08,25;UBERON:0002423,1.52e-08,25;UBERON:0006235,1.52e-08,25;UBERON:0004161,1.52e-08,25;UBERON:0009856,3.29e-08,26;UBERON:0007100,1.40e-07,27|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0,0.255725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0.560677600142307,0,0,0,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0.265059536642971,0,0,0.252320850875628,0,0,0,0,0.928735856063958,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,36.7589600983309,27.5191620669735,17.7236972004421,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0.904318131178758,0,1.19967589418468,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0.601519410909855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26690225624989,0,0,0,0.650060246036521,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,1.13008116620243,0,0,1.75380354101505,0.578775534266688,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0,0,0.996239941255349,0.552567831062295,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.110579259931225,0,0.219385397153973,0,0,0.0769502585037971,0.91153644677601,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0.979396848954886,0,0,0,0.265372693510018,0,0.296521128680622,0.247127877893006,0.417687798021821,0.202203398942031,0.802577647298789,0.234264445725339,0,0,0,0,0,0,0.252746318513952,0.450970258243478,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.698906672968121,0,0.0967563312890851,0.0730893170861856,0.164230914106418,0.193978032976839,0,0.225980740780532,0,0.19871461170299,0.0633107959558787,0,0.160317640503067,0.85381197895741,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=718 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=224bp_to_ENST00000466344_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_15_at_C3_5end | |||
|id=chr19:6710715..6710743,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000453;9.59e-27;5!CL:0000990;5.53e-15;8!CL:0000451;2.68e-12;10!CL:0002591;1.68e-09;1!CL:0000182;4.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.61e-27,5;CL:0000990,5.54e-15,8;CL:0000451,2.68e-12,10;CL:0002591,2.46e-09,1;CL:0000182,4.31e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.17e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.16e-15!115;UBERON:0007100!2.85e-09!27;UBERON:0003103!2.20e-08!69;UBERON:0000948!4.66e-07!24;UBERON:0005498!4.66e-07!24;UBERON:0004140!4.66e-07!24;UBERON:0009881!4.66e-07!24;UBERON:0004141!4.66e-07!24;UBERON:0003084!4.66e-07!24;UBERON:0007005!4.66e-07!24;UBERON:0004139!4.66e-07!24;UBERON:0004291!4.66e-07!24;UBERON:0002107!8.53e-07!19;UBERON:0006925!8.53e-07!19;UBERON:0008836!8.53e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0002081;5.28e-18;2!UBERON:0004151;2.54e-12;3!UBERON:0002107;2.62e-11;19!UBERON:0006925;2.62e-11;19!UBERON:0002134;6.31e-10;1!UBERON:0005208;6.31e-10;1!UBERON:0004145;6.31e-10;1!UBERON:0005946;6.31e-10;1!UBERON:0005965;6.31e-10;1!UBERON:0002078;6.31e-10;1!UBERON:0002079;8.17e-10;1!UBERON:0002365;1.43e-09;31!UBERON:0002330;1.43e-09;31!UBERON:0002423;1.52e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,6.27e-18,2;UBERON:0010227,6.27e-18,2;UBERON:0004151,2.85e-12,3;UBERON:0004145,5.28e-12,3;UBERON:0002107,2.62e-11,19;UBERON:0006925,2.62e-11,19;UBERON:0008836,2.62e-11,19;UBERON:0002134,6.31e-10,1;UBERON:0005208,6.31e-10,1;UBERON:0005946,6.31e-10,1;UBERON:0005965,6.31e-10,1;UBERON:0002078,6.31e-10,1;UBERON:0008835,9.70e-10,22;UBERON:0003894,9.70e-10,22;UBERON:0002079,9.70e-10,1;UBERON:0002365,1.56e-09,31;UBERON:0002330,1.56e-09,31;UBERON:0009854,2.62e-09,23;UBERON:0007499,1.52e-08,25;UBERON:0009497,1.52e-08,25;UBERON:0000015,1.52e-08,25;UBERON:0002423,1.52e-08,25;UBERON:0006235,1.52e-08,25;UBERON:0004161,1.52e-08,25;UBERON:0009856,3.29e-08,26;UBERON:0007100,1.40e-07,27 | |||
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|short_description=p15@C3 | |||
}} |
Revision as of 22:49, 11 September 2013
Short description: | p15@C3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_C3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 224bp_to_ENST00000466344_5end |
EntrezGene: | C3 |
HGNC: | 1318 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 9.61e-27 | 5 |
conventional dendritic cell | 5.54e-15 | 8 |
dendritic cell | 2.68e-12 | 10 |
smooth muscle cell of the pulmonary artery | 2.46e-09 | 1 |
hepatocyte | 4.31e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 6.27e-18 | 2 |
future cardiac atrium | 6.27e-18 | 2 |
cardiac chamber | 2.85e-12 | 3 |
outflow tract | 5.28e-12 | 3 |
liver | 2.62e-11 | 19 |
digestive gland | 2.62e-11 | 19 |
liver bud | 2.62e-11 | 19 |
tricuspid valve | 6.31e-10 | 1 |
right atrium valve | 6.31e-10 | 1 |
outflow tract of atrium | 6.31e-10 | 1 |
outflow part of right atrium | 6.31e-10 | 1 |
right cardiac atrium | 6.31e-10 | 1 |
hepatic diverticulum | 9.70e-10 | 22 |
liver primordium | 9.70e-10 | 22 |
left cardiac atrium | 9.70e-10 | 1 |
exocrine gland | 1.56e-09 | 31 |
exocrine system | 1.56e-09 | 31 |
digestive tract diverticulum | 2.62e-09 | 23 |
epithelial sac | 1.52e-08 | 25 |
epithelium of foregut-midgut junction | 1.52e-08 | 25 |
anatomical boundary | 1.52e-08 | 25 |
hepatobiliary system | 1.52e-08 | 25 |
foregut-midgut junction | 1.52e-08 | 25 |
septum transversum | 1.52e-08 | 25 |
sac | 3.29e-08 | 26 |
primary circulatory organ | 1.40e-07 | 27 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.