FFCP PHASE1:Hg19::chr19:7741968..7742004,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=199675|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=27291|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BC035847_5end|coexpression_cluster_id=C26|description=CAGE_peak_1_at_C19orf59_5end|id=chr19:7741968..7742004,+|ontology_enrichment_celltype=CL:0000763!9.95e-49!112;CL:0000049!9.95e-49!112;CL:0000766!3.45e-47!76;CL:0002057!2.39e-43!42;CL:0002194!9.25e-42!63;CL:0000576!9.25e-42!63;CL:0000040!9.25e-42!63;CL:0000559!9.25e-42!63;CL:0000037!1.28e-40!172;CL:0000566!1.28e-40!172;CL:0000839!7.08e-40!70;CL:0002009!7.56e-40!65;CL:0000860!2.69e-39!45;CL:0002032!6.91e-39!165;CL:0000837!6.91e-39!165;CL:0000557!1.52e-37!71;CL:0000988!2.06e-37!182;CL:0000738!3.49e-33!140;CL:0002087!3.57e-30!119;CL:0002031!2.55e-27!124;CL:0000094!2.29e-10!8;CL:0000081!2.87e-08!11|ontology_enrichment_celltype_v019=CL:0000860;1.57e-54;33!CL:0002057;1.57e-54;33!CL:0000473;5.22e-45;39!CL:0000234;5.22e-45;39!CL:0000576;4.89e-39;48!CL:0000766;1.87e-28;69!CL:0000763;9.10e-21;100!CL:0000094;2.32e-15;8!CL:0002087;9.98e-11;104!CL:0000081;1.14e-10;11!CL:0000738;4.77e-10;136!CL:0002393;5.52e-10;6!CL:0002397;5.52e-10;6!CL:0000988;1.94e-08;177!CL:0000775;9.70e-07;3|ontology_enrichment_celltype_v019_2=CL:0000766,7.98e-68,72;CL:0000763,4.02e-64,108;CL:0000049,4.02e-64,108;CL:0000860,7.45e-63,42;CL:0002057,7.45e-63,42;CL:0000473,5.60e-62,48;CL:0000234,5.60e-62,48;CL:0002194,4.44e-60,59;CL:0000576,4.44e-60,59;CL:0000040,4.44e-60,59;CL:0000559,4.44e-60,59;CL:0002009,1.24e-57,61;CL:0000839,1.92e-54,66;CL:0000557,2.40e-53,67;CL:0000037,8.80e-45,168;CL:0002032,5.22e-43,161;CL:0000837,5.22e-43,161;CL:0000988,2.11e-41,177;CL:0000738,1.30e-38,136;CL:0002087,2.10e-34,115;CL:0002031,2.61e-29,120;CL:0000094,2.19e-15,8;CL:0000134,5.43e-11,354;CL:0000081,1.10e-10,11;CL:0002320,2.07e-10,361;CL:0000219,2.12e-08,386;CL:0000775,9.52e-07,3|ontology_enrichment_development_v019=CL:0002057;1.95e-45;42!CL:0000049;1.18e-19;108|ontology_enrichment_disease=DOID:8692!6.32e-08!31;DOID:1240!9.60e-07!39|ontology_enrichment_disease_v019=DOID:8692;1.28e-07;31|ontology_enrichment_disease_v019_2=DOID:8692,5.65e-08,31|ontology_enrichment_uberon=UBERON:0002390!5.96e-42!102;UBERON:0003061!5.96e-42!102;UBERON:0002193!2.33e-38!112;UBERON:0002371!5.22e-31!80;UBERON:0001474!1.92e-27!86;UBERON:0007023!3.56e-25!115;UBERON:0002405!3.29e-24!115;UBERON:0004765!1.74e-20!101;UBERON:0001434!1.74e-20!101;UBERON:0003081!2.75e-12!216;UBERON:0000178!1.28e-10!15;UBERON:0000179!1.28e-10!15;UBERON:0000463!1.28e-10!15;UBERON:0002204!5.53e-08!167|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-14;15!UBERON:0000179;2.28e-14;15!UBERON:0000463;2.28e-14;15!UBERON:0002390;1.40e-09;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.09e-60,98;UBERON:0003061,4.09e-60,98;UBERON:0002193,7.24e-55,108;UBERON:0002371,2.91e-45,76;UBERON:0002405,1.95e-41,93;UBERON:0001474,7.34e-41,82;UBERON:0004765,6.58e-36,90;UBERON:0001434,7.66e-31,100;UBERON:0003081,2.89e-21,203;UBERON:0000178,2.29e-14,15;UBERON:0000179,2.29e-14,15;UBERON:0000463,2.29e-14,15;UBERON:0002204,1.22e-13,167;UBERON:0000926,1.18e-09,315;UBERON:0004120,1.18e-09,315;UBERON:0006603,1.18e-09,315;UBERON:0002384,1.26e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,32.2558707016101,18.8076405067634,16.7201413181362,0,0,0,0,0.142169232487422,0,23.2678071583389,10.8294001633877,10.4165217943609,0.223915474239924,0.647787332037959,0,76.9156683143897,55.1698877785662,54.8239978284465,65.7774174443088,44.817299794379,33.4482880566712,39.7015501404568,24.0791064137355,30.5062076556275,37.922024881028,23.8829332926016,21.6682378550947,97.8860165621544,82.1447511674116,96.4063748269413,93.9677549578671,81.1950438502517,52.4256443155214,34.6343865196052,26.528666463677,15.344091019177,59.4928939188597,31.7735725827038,36.7465126907389,34.9235644706873,15.1230046341858,19.7641848681656,43.5887641896025,46.0347044984456,40.1907232049923,4.22510572623884,2.97646019951061,7.96702852931828,43.0218657291076,41.1484686385727,38.7348663939963,0.285012743741249,0,0.182664153764634,0,1.09227722252426,0,1.28019066769952,0,0.574752439954483,0.661044872784862,0,0,0,0,0,5.04457706683382,0.790152254325231,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637130828648193,0,0,1.20460095262218,0.383959833463255,0,0.710331756132051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.7881167947941,0,0,0.649094787309367,1.74129737299267,2.52620124985844,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,88.2928796821624,89.1894607541148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269662616320329,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,12.6362303175188,7.8774516013026,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=199675 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27291 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC035847_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_1_at_C19orf59_5end | |||
|id=chr19:7741968..7742004,+ | |||
|ontology_enrichment_celltype=CL:0000763!9.95e-49!112;CL:0000049!9.95e-49!112;CL:0000766!3.45e-47!76;CL:0002057!2.39e-43!42;CL:0002194!9.25e-42!63;CL:0000576!9.25e-42!63;CL:0000040!9.25e-42!63;CL:0000559!9.25e-42!63;CL:0000037!1.28e-40!172;CL:0000566!1.28e-40!172;CL:0000839!7.08e-40!70;CL:0002009!7.56e-40!65;CL:0000860!2.69e-39!45;CL:0002032!6.91e-39!165;CL:0000837!6.91e-39!165;CL:0000557!1.52e-37!71;CL:0000988!2.06e-37!182;CL:0000738!3.49e-33!140;CL:0002087!3.57e-30!119;CL:0002031!2.55e-27!124;CL:0000094!2.29e-10!8;CL:0000081!2.87e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-54;33!CL:0002057;1.57e-54;33!CL:0000473;5.22e-45;39!CL:0000234;5.22e-45;39!CL:0000576;4.89e-39;48!CL:0000766;1.87e-28;69!CL:0000763;9.10e-21;100!CL:0000094;2.32e-15;8!CL:0002087;9.98e-11;104!CL:0000081;1.14e-10;11!CL:0000738;4.77e-10;136!CL:0002393;5.52e-10;6!CL:0002397;5.52e-10;6!CL:0000988;1.94e-08;177!CL:0000775;9.70e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.98e-68,72;CL:0000763,4.02e-64,108;CL:0000049,4.02e-64,108;CL:0000860,7.45e-63,42;CL:0002057,7.45e-63,42;CL:0000473,5.60e-62,48;CL:0000234,5.60e-62,48;CL:0002194,4.44e-60,59;CL:0000576,4.44e-60,59;CL:0000040,4.44e-60,59;CL:0000559,4.44e-60,59;CL:0002009,1.24e-57,61;CL:0000839,1.92e-54,66;CL:0000557,2.40e-53,67;CL:0000037,8.80e-45,168;CL:0002032,5.22e-43,161;CL:0000837,5.22e-43,161;CL:0000988,2.11e-41,177;CL:0000738,1.30e-38,136;CL:0002087,2.10e-34,115;CL:0002031,2.61e-29,120;CL:0000094,2.19e-15,8;CL:0000134,5.43e-11,354;CL:0000081,1.10e-10,11;CL:0002320,2.07e-10,361;CL:0000219,2.12e-08,386;CL:0000775,9.52e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.95e-45;42!CL:0000049;1.18e-19;108 | |||
|ontology_enrichment_disease=DOID:8692!6.32e-08!31;DOID:1240!9.60e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.28e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.65e-08,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.96e-42!102;UBERON:0003061!5.96e-42!102;UBERON:0002193!2.33e-38!112;UBERON:0002371!5.22e-31!80;UBERON:0001474!1.92e-27!86;UBERON:0007023!3.56e-25!115;UBERON:0002405!3.29e-24!115;UBERON:0004765!1.74e-20!101;UBERON:0001434!1.74e-20!101;UBERON:0003081!2.75e-12!216;UBERON:0000178!1.28e-10!15;UBERON:0000179!1.28e-10!15;UBERON:0000463!1.28e-10!15;UBERON:0002204!5.53e-08!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.28e-14;15!UBERON:0000179;2.28e-14;15!UBERON:0000463;2.28e-14;15!UBERON:0002390;1.40e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.09e-60,98;UBERON:0003061,4.09e-60,98;UBERON:0002193,7.24e-55,108;UBERON:0002371,2.91e-45,76;UBERON:0002405,1.95e-41,93;UBERON:0001474,7.34e-41,82;UBERON:0004765,6.58e-36,90;UBERON:0001434,7.66e-31,100;UBERON:0003081,2.89e-21,203;UBERON:0000178,2.29e-14,15;UBERON:0000179,2.29e-14,15;UBERON:0000463,2.29e-14,15;UBERON:0002204,1.22e-13,167;UBERON:0000926,1.18e-09,315;UBERON:0004120,1.18e-09,315;UBERON:0006603,1.18e-09,315;UBERON:0002384,1.26e-09,371 | |||
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|short_description=p1@C19orf59 | |||
}} |
Revision as of 22:55, 11 September 2013
Short description: | p1@C19orf59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_C19orf59_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_BC035847_5end |
EntrezGene: | C19orf59 |
HGNC: | 27291 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.98e-68 | 72 |
myeloid cell | 4.02e-64 | 108 |
common myeloid progenitor | 4.02e-64 | 108 |
classical monocyte | 7.45e-63 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.45e-63 | 42 |
defensive cell | 5.60e-62 | 48 |
phagocyte | 5.60e-62 | 48 |
monopoietic cell | 4.44e-60 | 59 |
monocyte | 4.44e-60 | 59 |
monoblast | 4.44e-60 | 59 |
promonocyte | 4.44e-60 | 59 |
macrophage dendritic cell progenitor | 1.24e-57 | 61 |
myeloid lineage restricted progenitor cell | 1.92e-54 | 66 |
granulocyte monocyte progenitor cell | 2.40e-53 | 67 |
hematopoietic stem cell | 8.80e-45 | 168 |
hematopoietic oligopotent progenitor cell | 5.22e-43 | 161 |
hematopoietic multipotent progenitor cell | 5.22e-43 | 161 |
hematopoietic cell | 2.11e-41 | 177 |
leukocyte | 1.30e-38 | 136 |
nongranular leukocyte | 2.10e-34 | 115 |
hematopoietic lineage restricted progenitor cell | 2.61e-29 | 120 |
granulocyte | 2.19e-15 | 8 |
mesenchymal cell | 5.43e-11 | 354 |
blood cell | 1.10e-10 | 11 |
connective tissue cell | 2.07e-10 | 361 |
motile cell | 2.12e-08 | 386 |
neutrophil | 9.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.09e-60 | 98 |
blood island | 4.09e-60 | 98 |
hemolymphoid system | 7.24e-55 | 108 |
bone marrow | 2.91e-45 | 76 |
immune system | 1.95e-41 | 93 |
bone element | 7.34e-41 | 82 |
skeletal element | 6.58e-36 | 90 |
skeletal system | 7.66e-31 | 100 |
lateral plate mesoderm | 2.89e-21 | 203 |
blood | 2.29e-14 | 15 |
haemolymphatic fluid | 2.29e-14 | 15 |
organism substance | 2.29e-14 | 15 |
musculoskeletal system | 1.22e-13 | 167 |
mesoderm | 1.18e-09 | 315 |
mesoderm-derived structure | 1.18e-09 | 315 |
presumptive mesoderm | 1.18e-09 | 315 |
connective tissue | 1.26e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.65e-08 | 31 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.