FFCP PHASE1:Hg19::chr19:8675642..8675653,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81794|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13201|TSSclassifier=S|UniProt=Q6ZN14,Q9H324,Q59FE5|association_with_transcript=-54bp_to_NM_030957,uc002mkj.1,uc002mkk.1_5end|description=CAGE_peak_2_at_ADAMTS10_5end|id=chr19:8675642..8675653,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000064;1.67e-23;3!CL:0000067;1.67e-23;3!CL:0005012;1.67e-23;3!CL:0002304;1.67e-23;3!CL:0002591;1.09e-08;1|ontology_enrichment_celltype_v019_2=CL:0000064,2.65e-23,3;CL:0000067,2.65e-23,3;CL:0005012,2.65e-23,3;CL:0002304,2.65e-23,3;CL:0002591,1.91e-08,1|ontology_enrichment_development_v019=UBERON:0003056;9.33e-11;3!UBERON:0001045;1.09e-08;1!UBERON:0005425;1.09e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!3.83e-12!90;UBERON:0003075!3.18e-10!86;UBERON:0007284!3.18e-10!86;UBERON:0007023!4.54e-10!115;UBERON:0001049!1.50e-09!57;UBERON:0005068!1.50e-09!57;UBERON:0006241!1.50e-09!57;UBERON:0007135!1.50e-09!57;UBERON:0000073!3.44e-09!94;UBERON:0001016!3.44e-09!94;UBERON:0001017!3.07e-08!82;UBERON:0000955!3.29e-08!69;UBERON:0006238!3.29e-08!69;UBERON:0002616!4.66e-08!59;UBERON:0005743!4.92e-08!86;UBERON:0001893!3.78e-07!34;UBERON:0002791!6.21e-07!33;UBERON:0002020!9.41e-07!34;UBERON:0003528!9.41e-07!34|ontology_enrichment_uberon_v019=UBERON:0001778;1.67e-23;3!UBERON:0001775;1.67e-23;3!UBERON:0000488;8.79e-18;4!UBERON:0002104;2.36e-12;21!UBERON:0002203;4.87e-12;6!UBERON:0001768;4.87e-12;6!UBERON:0002200;4.87e-12;6!UBERON:0007625;3.32e-11;11!UBERON:0001032;9.55e-11;24!UBERON:0004456;9.55e-11;24!UBERON:0000019;9.74e-10;19!UBERON:0000047;9.74e-10;19!UBERON:0004088;9.74e-10;19!UBERON:0010230;9.74e-10;19!UBERON:0000970;3.06e-09;20!UBERON:0001801;7.84e-09;14!UBERON:0001456;8.62e-09;21!UBERON:0001154;1.09e-08;1!UBERON:0000941;1.09e-08;1!UBERON:0001153;1.09e-08;1!UBERON:0001785;1.09e-08;1!UBERON:0002464;1.09e-08;1!UBERON:0004904;1.09e-08;1!UBERON:0009854;1.09e-08;1!UBERON:0001021;1.09e-08;1!UBERON:0000020;5.24e-08;23!UBERON:0004907;8.65e-07;5!UBERON:0006876;8.95e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.65e-23,3;UBERON:0001775,2.65e-23,3;UBERON:0000488,1.24e-17,4;UBERON:0000019,7.22e-13,20;UBERON:0000047,7.22e-13,20;UBERON:0010312,7.22e-13,20;UBERON:0004088,7.22e-13,20;UBERON:0010230,7.22e-13,20;UBERON:0003072,7.22e-13,20;UBERON:0004128,7.22e-13,20;UBERON:0003071,7.22e-13,20;UBERON:0000970,3.12e-12,21;UBERON:0002104,3.12e-12,21;UBERON:0002203,6.11e-12,6;UBERON:0001768,6.11e-12,6;UBERON:0002200,6.11e-12,6;UBERON:0001456,1.18e-11,22;UBERON:0007625,4.88e-11,11;UBERON:0000020,1.21e-10,24;UBERON:0001032,1.21e-10,24;UBERON:0004456,1.21e-10,24;UBERON:0000941,9.02e-09,1;UBERON:0001785,9.02e-09,1;UBERON:0002464,9.02e-09,1;UBERON:0004904,9.02e-09,1;UBERON:0001021,9.02e-09,1;UBERON:0003902,9.02e-09,1;UBERON:0005425,9.02e-09,1;UBERON:0001154,1.05e-08,1;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0001801,1.06e-08,14;UBERON:0005085,4.00e-08,31;UBERON:0002346,6.55e-07,86;UBERON:0004907,6.85e-07,5|phase1_expression=0.181678379270557,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.816002764977012,0,0.286235987131057,0.821246550437305,2.13422487311165,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.434021741431704,0.223915474239924,0,0.515151135268373,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,1.45990461090791,3.21418378357831,2.4390233720882,1.14185221401064,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,1.14734648299525,0,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0.163461903113459,0.151357427644931,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0.600182192168805,0,0.257640540045629,0.37223371266318,0.168776332241266,0.292311015483596,0.757301322732344,0.0920498986422993,0,0.355009592516614,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0.236613600079688,0,0,0,0.217879444092406,0,0.134831308160164,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,1.04337364477569,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.37872730027914,0,0,0,0,0,0,0,0,3.48768055066624,0.22001485746285,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0,0.199945982364114,0,0,0,0.958499421966331,3.44585807502342,0,0,0,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0.207970861530807,0,0,0.35142424497814,0.300946099727719,0,0,0,0.368738337083406,0,0.391602314925481,1.37257369524342,0,0.215714200818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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81794 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13201 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZN14,Q9H324,Q59FE5 | |||
|association_with_transcript=-54bp_to_NM_030957,uc002mkj.1,uc002mkk.1_5end | |||
|description=CAGE_peak_2_at_ADAMTS10_5end | |||
|id=chr19:8675642..8675653,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.67e-23;3!CL:0000067;1.67e-23;3!CL:0005012;1.67e-23;3!CL:0002304;1.67e-23;3!CL:0002591;1.09e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.65e-23,3;CL:0000067,2.65e-23,3;CL:0005012,2.65e-23,3;CL:0002304,2.65e-23,3;CL:0002591,1.91e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0003056;9.33e-11;3!UBERON:0001045;1.09e-08;1!UBERON:0005425;1.09e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.83e-12!90;UBERON:0003075!3.18e-10!86;UBERON:0007284!3.18e-10!86;UBERON:0007023!4.54e-10!115;UBERON:0001049!1.50e-09!57;UBERON:0005068!1.50e-09!57;UBERON:0006241!1.50e-09!57;UBERON:0007135!1.50e-09!57;UBERON:0000073!3.44e-09!94;UBERON:0001016!3.44e-09!94;UBERON:0001017!3.07e-08!82;UBERON:0000955!3.29e-08!69;UBERON:0006238!3.29e-08!69;UBERON:0002616!4.66e-08!59;UBERON:0005743!4.92e-08!86;UBERON:0001893!3.78e-07!34;UBERON:0002791!6.21e-07!33;UBERON:0002020!9.41e-07!34;UBERON:0003528!9.41e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.67e-23;3!UBERON:0001775;1.67e-23;3!UBERON:0000488;8.79e-18;4!UBERON:0002104;2.36e-12;21!UBERON:0002203;4.87e-12;6!UBERON:0001768;4.87e-12;6!UBERON:0002200;4.87e-12;6!UBERON:0007625;3.32e-11;11!UBERON:0001032;9.55e-11;24!UBERON:0004456;9.55e-11;24!UBERON:0000019;9.74e-10;19!UBERON:0000047;9.74e-10;19!UBERON:0004088;9.74e-10;19!UBERON:0010230;9.74e-10;19!UBERON:0000970;3.06e-09;20!UBERON:0001801;7.84e-09;14!UBERON:0001456;8.62e-09;21!UBERON:0001154;1.09e-08;1!UBERON:0000941;1.09e-08;1!UBERON:0001153;1.09e-08;1!UBERON:0001785;1.09e-08;1!UBERON:0002464;1.09e-08;1!UBERON:0004904;1.09e-08;1!UBERON:0009854;1.09e-08;1!UBERON:0001021;1.09e-08;1!UBERON:0000020;5.24e-08;23!UBERON:0004907;8.65e-07;5!UBERON:0006876;8.95e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,2.65e-23,3;UBERON:0001775,2.65e-23,3;UBERON:0000488,1.24e-17,4;UBERON:0000019,7.22e-13,20;UBERON:0000047,7.22e-13,20;UBERON:0010312,7.22e-13,20;UBERON:0004088,7.22e-13,20;UBERON:0010230,7.22e-13,20;UBERON:0003072,7.22e-13,20;UBERON:0004128,7.22e-13,20;UBERON:0003071,7.22e-13,20;UBERON:0000970,3.12e-12,21;UBERON:0002104,3.12e-12,21;UBERON:0002203,6.11e-12,6;UBERON:0001768,6.11e-12,6;UBERON:0002200,6.11e-12,6;UBERON:0001456,1.18e-11,22;UBERON:0007625,4.88e-11,11;UBERON:0000020,1.21e-10,24;UBERON:0001032,1.21e-10,24;UBERON:0004456,1.21e-10,24;UBERON:0000941,9.02e-09,1;UBERON:0001785,9.02e-09,1;UBERON:0002464,9.02e-09,1;UBERON:0004904,9.02e-09,1;UBERON:0001021,9.02e-09,1;UBERON:0003902,9.02e-09,1;UBERON:0005425,9.02e-09,1;UBERON:0001154,1.05e-08,1;UBERON:0001153,1.05e-08,1;UBERON:0001045,1.05e-08,1;UBERON:0001801,1.06e-08,14;UBERON:0005085,4.00e-08,31;UBERON:0002346,6.55e-07,86;UBERON:0004907,6.85e-07,5 | |||
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| |||
|short_description=p2@ADAMTS10 | |||
}} |
Revision as of 23:03, 11 September 2013
Short description: | p2@ADAMTS10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ADAMTS10_5end |
Coexpression cluster: | NA |
Association with transcript: | -54bp_to_NM_030957, uc002mkj.1, uc002mkk.1_5end |
EntrezGene: | ADAMTS10 |
HGNC: | 13201 |
UniProt: | Q6ZN14Q9H324Q59FE5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.65e-23 | 3 |
ciliated epithelial cell | 2.65e-23 | 3 |
multi-ciliated epithelial cell | 2.65e-23 | 3 |
non-pigmented ciliary epithelial cell | 2.65e-23 | 3 |
smooth muscle cell of the pulmonary artery | 1.91e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 2.65e-23 | 3 |
ciliary body | 2.65e-23 | 3 |
atypical epithelium | 1.24e-17 | 4 |
camera-type eye | 7.22e-13 | 20 |
simple eye | 7.22e-13 | 20 |
immature eye | 7.22e-13 | 20 |
ocular region | 7.22e-13 | 20 |
eyeball of camera-type eye | 7.22e-13 | 20 |
optic cup | 7.22e-13 | 20 |
optic vesicle | 7.22e-13 | 20 |
eye primordium | 7.22e-13 | 20 |
eye | 3.12e-12 | 21 |
visual system | 3.12e-12 | 21 |
vasculature of eye | 6.11e-12 | 6 |
uvea | 6.11e-12 | 6 |
vasculature of head | 6.11e-12 | 6 |
face | 1.18e-11 | 22 |
pigment epithelium of eye | 4.88e-11 | 11 |
sense organ | 1.21e-10 | 24 |
sensory system | 1.21e-10 | 24 |
entire sense organ system | 1.21e-10 | 24 |
cranial nerve II | 9.02e-09 | 1 |
cranial nerve | 9.02e-09 | 1 |
nerve trunk | 9.02e-09 | 1 |
nerve connecting eye with brain | 9.02e-09 | 1 |
nerve | 9.02e-09 | 1 |
retinal neural layer | 9.02e-09 | 1 |
presumptive neural retina | 9.02e-09 | 1 |
vermiform appendix | 1.05e-08 | 1 |
caecum | 1.05e-08 | 1 |
midgut | 1.05e-08 | 1 |
anterior segment of eyeball | 1.06e-08 | 14 |
ectodermal placode | 4.00e-08 | 31 |
neurectoderm | 6.55e-07 | 86 |
lower digestive tract | 6.85e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.