FFCP PHASE1:Hg19::chr19:20933136..20933152,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1735|description=CAGE_peak_at_chr19:20933136..20933152,-|id=chr19:20933136..20933152,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0001014;3.24e-12;2!CL:0001016;3.24e-12;2!CL:0000322;1.04e-08;3|ontology_enrichment_celltype_v019_2=CL:0001014,2.90e-12,2;CL:0001016,2.90e-12,2;CL:0000322,1.12e-08,3|ontology_enrichment_development_v019=UBERON:0005754;2.10e-23;1!UBERON:0007123;1.04e-18;5!UBERON:0007297;2.07e-12;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3910;2.07e-12;2|ontology_enrichment_disease_v019_2=DOID:3910,2.32e-12,2|ontology_enrichment_uberon=UBERON:0006947!4.93e-18!3;UBERON:0004054!4.93e-18!3;UBERON:0005904!1.18e-13!4;UBERON:0007023!3.37e-13!115;UBERON:0000341!3.55e-12!2;UBERON:0003101!1.42e-08!22;UBERON:0000079!1.42e-08!22;UBERON:0001008!2.03e-08!45;UBERON:0003135!2.25e-08!11;UBERON:0001000!3.32e-07!1;UBERON:0005352!3.32e-07!1;UBERON:0000998!3.52e-07!1;UBERON:0006868!3.52e-07!1;UBERON:0006122!4.43e-07!1;UBERON:0001046!4.91e-07!19;UBERON:0001301!4.97e-07!1;UBERON:0000996!5.26e-07!1;UBERON:0007029!6.60e-07!1;UBERON:0001736!7.82e-07!1;UBERON:0006298!7.82e-07!1;UBERON:0006554!8.26e-07!44|ontology_enrichment_uberon_v019=UBERON:0006947;2.30e-30;3!UBERON:0004054;2.30e-30;3!UBERON:0001000;2.10e-23;1!UBERON:0000998;2.10e-23;1!UBERON:0006868;2.10e-23;1!UBERON:0005352;2.10e-23;1!UBERON:0005904;4.60e-23;4!UBERON:0000058;1.47e-20;10!UBERON:0002046;1.04e-18;5!UBERON:0004903;2.07e-12;2!UBERON:0002173;2.07e-12;2!UBERON:0002186;2.07e-12;2!UBERON:0000341;3.24e-12;2!UBERON:0003135;5.00e-09;11!UBERON:0004821;1.04e-08;3!UBERON:0007499;1.04e-08;3!UBERON:0003215;1.04e-08;3!UBERON:0010368;1.04e-08;3!UBERON:0009911;1.04e-08;3!UBERON:0002299;1.04e-08;3!UBERON:0006524;1.04e-08;3!UBERON:0008874;1.04e-08;3!UBERON:0002169;1.04e-08;3!UBERON:0004894;1.04e-08;3!UBERON:0009856;7.69e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.98e-30,3;UBERON:0004054,1.98e-30,3;UBERON:0001000,1.67e-23,1;UBERON:0005352,1.67e-23,1;UBERON:0000998,2.10e-23,1;UBERON:0006868,2.10e-23,1;UBERON:0005904,4.11e-23,4;UBERON:0002046,1.04e-18,5;UBERON:0004117,1.04e-18,5;UBERON:0007689,1.04e-18,5;UBERON:0007123,1.04e-18,5;UBERON:0003091,1.04e-18,5;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0000341,3.62e-12,2;UBERON:0000058,3.67e-11,19;UBERON:0003135,4.80e-09,11;UBERON:0009722,4.80e-09,11;UBERON:0007690,4.80e-09,11;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,1.44999915086959,0,3.0510438035132,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.94584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0,0,0.472834243795189,0.367182116944987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0.471612915298998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627944742804112,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,3.81048345171836,0,0,0,0,0.098150233615243,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1735 | |||
|description=CAGE_peak_at_chr19:20933136..20933152,- | |||
|id=chr19:20933136..20933152,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0001014;3.24e-12;2!CL:0001016;3.24e-12;2!CL:0000322;1.04e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,2.90e-12,2;CL:0001016,2.90e-12,2;CL:0000322,1.12e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.10e-23;1!UBERON:0007123;1.04e-18;5!UBERON:0007297;2.07e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3910;2.07e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.32e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0006947!4.93e-18!3;UBERON:0004054!4.93e-18!3;UBERON:0005904!1.18e-13!4;UBERON:0007023!3.37e-13!115;UBERON:0000341!3.55e-12!2;UBERON:0003101!1.42e-08!22;UBERON:0000079!1.42e-08!22;UBERON:0001008!2.03e-08!45;UBERON:0003135!2.25e-08!11;UBERON:0001000!3.32e-07!1;UBERON:0005352!3.32e-07!1;UBERON:0000998!3.52e-07!1;UBERON:0006868!3.52e-07!1;UBERON:0006122!4.43e-07!1;UBERON:0001046!4.91e-07!19;UBERON:0001301!4.97e-07!1;UBERON:0000996!5.26e-07!1;UBERON:0007029!6.60e-07!1;UBERON:0001736!7.82e-07!1;UBERON:0006298!7.82e-07!1;UBERON:0006554!8.26e-07!44 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;2.30e-30;3!UBERON:0004054;2.30e-30;3!UBERON:0001000;2.10e-23;1!UBERON:0000998;2.10e-23;1!UBERON:0006868;2.10e-23;1!UBERON:0005352;2.10e-23;1!UBERON:0005904;4.60e-23;4!UBERON:0000058;1.47e-20;10!UBERON:0002046;1.04e-18;5!UBERON:0004903;2.07e-12;2!UBERON:0002173;2.07e-12;2!UBERON:0002186;2.07e-12;2!UBERON:0000341;3.24e-12;2!UBERON:0003135;5.00e-09;11!UBERON:0004821;1.04e-08;3!UBERON:0007499;1.04e-08;3!UBERON:0003215;1.04e-08;3!UBERON:0010368;1.04e-08;3!UBERON:0009911;1.04e-08;3!UBERON:0002299;1.04e-08;3!UBERON:0006524;1.04e-08;3!UBERON:0008874;1.04e-08;3!UBERON:0002169;1.04e-08;3!UBERON:0004894;1.04e-08;3!UBERON:0009856;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.98e-30,3;UBERON:0004054,1.98e-30,3;UBERON:0001000,1.67e-23,1;UBERON:0005352,1.67e-23,1;UBERON:0000998,2.10e-23,1;UBERON:0006868,2.10e-23,1;UBERON:0005904,4.11e-23,4;UBERON:0002046,1.04e-18,5;UBERON:0004117,1.04e-18,5;UBERON:0007689,1.04e-18,5;UBERON:0007123,1.04e-18,5;UBERON:0003091,1.04e-18,5;UBERON:0004903,2.32e-12,2;UBERON:0002173,2.32e-12,2;UBERON:0002186,2.32e-12,2;UBERON:0000341,3.62e-12,2;UBERON:0000058,3.67e-11,19;UBERON:0003135,4.80e-09,11;UBERON:0009722,4.80e-09,11;UBERON:0007690,4.80e-09,11;UBERON:0004821,1.12e-08,3;UBERON:0003215,1.12e-08,3;UBERON:0010368,1.12e-08,3;UBERON:0009911,1.12e-08,3;UBERON:0002299,1.12e-08,3;UBERON:0006524,1.12e-08,3;UBERON:0008874,1.12e-08,3;UBERON:0002169,1.12e-08,3;UBERON:0004894,1.12e-08,3 | |||
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|short_description=p@chr19:20933136..20933152,- | |||
}} |
Revision as of 19:40, 11 September 2013
Short description: | p@chr19:20933136..20933152, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:20933136..20933152, - |
Coexpression cluster: | C1735_thyroid_pancreas_ductus_salivary_seminal_parotid_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 2.90e-12 | 2 |
immature CD1a-positive Langerhans cell | 2.90e-12 | 2 |
pneumocyte | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.98e-30 | 3 |
internal male genitalia | 1.98e-30 | 3 |
vas deferens | 1.67e-23 | 1 |
spermatic cord | 1.67e-23 | 1 |
seminal vesicle | 2.10e-23 | 1 |
seminal fluid secreting gland | 2.10e-23 | 1 |
duct of male reproductive system | 4.11e-23 | 4 |
thyroid gland | 1.04e-18 | 5 |
pharyngeal pouch | 1.04e-18 | 5 |
thyroid diverticulum | 1.04e-18 | 5 |
pharyngeal pouch 2 | 1.04e-18 | 5 |
thyroid primordium | 1.04e-18 | 5 |
bronchoalveolar duct junction | 2.32e-12 | 2 |
alveolar duct | 2.32e-12 | 2 |
bronchiole | 2.32e-12 | 2 |
throat | 3.62e-12 | 2 |
duct | 3.67e-11 | 19 |
male reproductive organ | 4.80e-09 | 11 |
entire pharyngeal arch endoderm | 4.80e-09 | 11 |
early pharyngeal endoderm | 4.80e-09 | 11 |
pulmonary alveolus epithelium | 1.12e-08 | 3 |
alveolus | 1.12e-08 | 3 |
pulmonary lobule | 1.12e-08 | 3 |
lobule | 1.12e-08 | 3 |
alveolus of lung | 1.12e-08 | 3 |
alveolar system | 1.12e-08 | 3 |
pulmonary acinus | 1.12e-08 | 3 |
alveolar sac | 1.12e-08 | 3 |
alveolar wall | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.32e-12 | 2 |
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