FFCP PHASE1:Hg19::chr19:42806477..42806500,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8576 | |||
|TSSclassifier=W | |||
|UniProt=Q15102 | |||
|association_with_transcript=295bp_to_ENST00000262890,NM_002573,uc002otg.2_5end | |||
|coexpression_cluster_id=C1824 | |||
|description=CAGE_peak_6_at_PAFAH1B3_5end | |||
|id=chr19:42806477..42806500,- | |||
|ontology_enrichment_celltype=CL:0000066!2.05e-32!254;CL:0002321!7.12e-22!248;CL:0000220!2.22e-21!246;CL:0000221!4.49e-12!71;CL:0000223!3.60e-11!59;CL:0000133!6.08e-10!59;CL:0002076!6.67e-10!43;CL:0002319!6.76e-10!25;CL:0000333!2.06e-07!41 | |||
|ontology_enrichment_celltype_v019=CL:0002319;9.22e-11;25!CL:0002076;2.46e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.92e-30,253;CL:0002321,5.67e-19,250;CL:0000221,8.63e-13,72;CL:0000223,3.35e-11,58;CL:0000133,1.27e-10,59;CL:0002319,1.74e-10,25;CL:0002076,1.87e-09,42;CL:0000333,3.74e-08,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!4.08e-14!143;DOID:305!1.94e-12!106;DOID:14566!5.77e-11!239;DOID:162!7.37e-11!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,8.20e-12,143;DOID:305,1.33e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0000475!9.52e-14!365;UBERON:0000481!6.37e-13!347;UBERON:0000064!6.19e-11!219;UBERON:0000924!1.53e-10!173;UBERON:0006601!1.53e-10!173;UBERON:0000468!5.78e-10!659;UBERON:0004121!8.67e-10!169;UBERON:0000119!9.30e-10!312;UBERON:0000483!3.33e-09!309;UBERON:0008947!1.95e-08!38;UBERON:0003258!1.95e-08!38;UBERON:0000922!2.60e-08!612;UBERON:0004119!2.67e-08!169;UBERON:0000925!2.67e-08!169;UBERON:0006595!2.67e-08!169;UBERON:0000072!2.79e-08!46;UBERON:0000477!3.94e-08!286;UBERON:0001004!6.98e-08!72;UBERON:0000033!8.10e-08!123;UBERON:0000063!1.05e-07!97;UBERON:0000467!2.08e-07!625;UBERON:0000065!2.13e-07!53;UBERON:0003104!2.28e-07!238;UBERON:0009142!2.28e-07!238;UBERON:0000153!2.37e-07!129;UBERON:0007811!2.37e-07!129;UBERON:0000480!3.35e-07!626;UBERON:0002050!4.81e-07!605;UBERON:0005423!4.81e-07!605;UBERON:0000923!5.03e-07!604;UBERON:0005291!5.03e-07!604;UBERON:0006598!5.03e-07!604;UBERON:0002532!5.03e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.44e-08;9!UBERON:0001557;8.44e-08;9!UBERON:0000072;1.08e-07;37 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.69e-09,223;UBERON:0004121,8.63e-08,171;UBERON:0000924,8.63e-08,171;UBERON:0006601,8.63e-08,171;UBERON:0008947,8.66e-08,38;UBERON:0003258,8.66e-08,38;UBERON:0001737,8.76e-08,9;UBERON:0004119,9.64e-08,160;UBERON:0000925,9.64e-08,160;UBERON:0006595,9.64e-08,160;UBERON:0000072,3.93e-07,47;UBERON:0001004,9.03e-07,74 | |||
|phase1_expression=0.726713517082227,0,0.140954404095971,0,0,0,0,0,0,4.66894479352867,30.0054502228144,3.9319446983431,1.31883489114227,2.97039247104112,1.32558950291166,0.672325146451775,1.20538905604795,2.92124036154949,1.46379839637152,7.38726348460727,7.14002419354885,3.44800193625897,7.72837165253853,6.98059567871709,4.01736446703369,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0.154816123316076,5.51652734687356,8.433765725791,3.32778609150109,0.46480320348181,0,0.587200878669695,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0,0,0.512365278902701,0.260118695119756,0.164437904603676,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.511450247374121,1.0843174571537,1.00267582127178,0.579386075843295,0.795285947051099,0,4.34860158954712,4.87804674417641,4.12823492757692,0.72038491523742,4.37154345951051,6.67411997011973,0,0,0,0,0,0,1.39133685156694,0.860234595106124,0.347140501607594,1.69592382577203,2.09749718104953,3.30141650328081,1.25396979922086,0.516833518338658,0.71153252537342,0.66944122552934,1.61131726843659,1.52054421143703,0.976248230192678,0.367663080345869,0.81014194788176,1.16089646769304,1.57170560838319,1.0135033243499,1.53316637465883,0,2.93122790288652,0,0,5.66922267785295,0.496971951695318,1.2663051166458,0.397227542439656,1.43418310374407,0.709336764396714,1.12135520028461,0,1.2333377420858,0.622422070799533,0.67355336034844,0.326923806226917,1.21085942115945,0.576175924479999,1.87457145467037,0.936480230490962,0.570471821544449,0,1.52664848236894,0.809364721840658,1.40450806702248,0.408308342509787,2.08818339430006,0.309977343527296,0,0.247266929278557,0.910161361938026,0.718618141816238,1.0100166837244,1.87677779807946,0.831192346452549,2.19488810440419,1.5324389789951,0.300476117813194,0.794025282120147,1.25572744982203,0,0.423863802319124,2.40072876867522,1.44273540933814,0.772921620136887,0.558350568994769,1.68776332241266,3.02054715999716,1.26216887122057,0.644349290496095,1.13152239773168,1.42003837006646,1.91428986632517,4.74769658469365,5.02478218224572,3.81844568827169,3.15485054927904,3.04934265323988,1.59035721985782,3.95059405756363,4.97573064073778,6.81266297364197,6.20461510428911,0,1.92972281457866,0,0.464367928031979,0.721879481669586,5.67872640191251,6.06904884281166,8.43538604592187,7.49999014580279,6.75426276686459,5.69449485866632,7.14605933248871,7.45641567476315,6.15595451114225,0,2.80483547606892,0.4115740113314,2.94017422771084,1.26755034821831,0.982827216677626,0,3.09024169590255,2.21379189377604,0.857839051492628,1.97550513735526,2.24803506515239,2.71428225511403,3.33318402570707,0.325808305310325,1.03993478527958,2.88662684050547,3.36198174427723,0.469634776943287,1.01056513432752,2.31492756288305,1.33177906564219,27.6571539285746,33.4809603217,0,0,0.148631162288728,8.43604505880993,1.84780341018745,2.69372684760534,1.70161193135412,2.3250715081117,9.58456697913028,0,0.264145302039678,0.414656231081544,0.288239906833923,0.12624243342638,2.73040945456327,2.29193055334967,4.68869788840188,1.71072446022705,1.7480673759565,3.90445975197093,1.71495859578347,2.46688385559794,3.48768055066624,1.7601188597028,0.517086863031111,0,0,1.59562869950922,4.16029747645464,1.80045161983499,7.09245660116391,2.66422179016099,0,0,3.29296134712308,0.65147236858747,0,0,0,0,0.799783929456456,0,0,0,1.67737398844108,0,1.42636905040718,0.723906533337896,0.410952645100767,1.43248770591916,0.336255431980582,0,0,0.256686072559497,3.30323011489202,5.20559415430487,19.3322203194424,12.5637199000762,15.9484687913291,0,0,0,2.20844685094452,6.00204625271613,1.08506009479894,0.207970861530807,0.178428988797162,0,0.234282829985426,0,2.27407504055985,2.0694614258501,3.32112799267718,2.94990669666725,1.12948698808508,2.93701736194111,1.02943027143257,0,0,0,6.36567900037145,8.32177197552485,7.86214762657169,0,0.153461973288062,0.561320188866147,0.128139149255701,0.511707249066704,0.160853921143607,0,0.925258162815933,1.9531789784444,1.64254312027618,0,2.32420756919918,4.10922128611516,5.21316822788541,0.276242966807689,0.803701137152247,0.546273504020151,0.262248829918848,2.70719767744447,1.07821471946181,7.0591479225917,13.1525302187935,1.05551628892876,1.13733384070897,1.53084334748864,2.59099099322567,0,5.41892875087706,8.52872615553251,3.82314409567557,3.3243040357149,7.16399215110971,0.219259876645935,0.261435451024901,2.3080511260475,1.96808787419823,0.976135183992909,0.206082023295445,0.457847324091717,0.742585499285292,0,1.95018073810956,4.82051789532479,0.773365746336976,1.07834031980251,0.614014698904518,0.551346289938122,0.751941714077915,1.59518363305651,1.53407929348982,0.534192213880424,1.81813406897076,1.53752053892085,1.27612712494584,1.0115778085555,1.39453664789186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| |||
|short_description=p6@PAFAH1B3 | |||
}} |
Revision as of 20:56, 11 September 2013
Short description: | p6@PAFAH1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PAFAH1B3_5end |
Coexpression cluster: | C1824_Alveolar_nonsmall_brain_duodenum_Neurons_Renal_temporal |
Association with transcript: | 295bp_to_ENST00000262890, NM_002573, uc002otg.2_5end |
EntrezGene: | PAFAH1B3 |
HGNC: | 8576 |
UniProt: | Q15102 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.92e-30 | 253 |
embryonic cell | 5.67e-19 | 250 |
ectodermal cell | 8.63e-13 | 72 |
endodermal cell | 3.35e-11 | 58 |
neurectodermal cell | 1.27e-10 | 59 |
neural cell | 1.74e-10 | 25 |
endo-epithelial cell | 1.87e-09 | 42 |
migratory neural crest cell | 3.74e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.69e-09 | 223 |
ectoderm-derived structure | 8.63e-08 | 171 |
ectoderm | 8.63e-08 | 171 |
presumptive ectoderm | 8.63e-08 | 171 |
respiratory primordium | 8.66e-08 | 38 |
endoderm of foregut | 8.66e-08 | 38 |
larynx | 8.76e-08 | 9 |
endoderm-derived structure | 9.64e-08 | 160 |
endoderm | 9.64e-08 | 160 |
presumptive endoderm | 9.64e-08 | 160 |
segment of respiratory tract | 3.93e-07 | 47 |
respiratory system | 9.03e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 8.20e-12 | 143 |
carcinoma | 1.33e-10 | 106 |
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