FFCP PHASE1:Hg19::chr19:51105300..51105305,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C266|description=CAGE_peak_at_chr19:51105300..51105305,+|id=chr19:51105300..51105305,+|ontology_enrichment_celltype=CL:0002274!8.06e-36!5;CL:0000457!8.06e-36!5;CL:0002191!8.06e-36!5;CL:0000097!8.06e-36!5;CL:0000831!8.06e-36!5;CL:0002028!8.06e-36!5;CL:0000163!4.53e-20!9;CL:0000080!1.21e-17!6;CL:0000763!1.86e-12!112;CL:0000049!1.86e-12!112;CL:0000988!1.22e-11!182;CL:0002032!6.35e-08!165;CL:0000837!6.35e-08!165;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172|ontology_enrichment_celltype_v019=CL:0000097;2.74e-09;5|ontology_enrichment_celltype_v019_2=CL:0000097,2.74e-09,5;CL:0002028,2.74e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!1.68e-66!8;DOID:8692!5.62e-22!31;DOID:1240!2.66e-17!39;DOID:2531!4.97e-13!51;DOID:0060083!4.97e-13!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002331!8.09e-11!10;UBERON:0000358!8.09e-11!10;UBERON:0000307!8.09e-11!10;UBERON:0000091!8.09e-11!10;UBERON:0000087!8.09e-11!10;UBERON:0007806!8.09e-11!10;UBERON:0008780!8.09e-11!10;UBERON:0005728!8.09e-11!10;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15|ontology_enrichment_uberon_v019=UBERON:0002331;4.93e-36;10!UBERON:0000178;2.27e-24;15!UBERON:0000179;2.27e-24;15!UBERON:0000463;2.27e-24;15!UBERON:0000478;1.38e-15;24!UBERON:0002390;5.23e-12;32!UBERON:0000922;6.81e-08;49|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.93e-36,10;UBERON:0000358,4.93e-36,10;UBERON:0000307,4.93e-36,10;UBERON:0000091,4.93e-36,10;UBERON:0000087,4.93e-36,10;UBERON:0007010,4.93e-36,10;UBERON:0007806,4.93e-36,10;UBERON:0008780,4.93e-36,10;UBERON:0005728,4.93e-36,10;UBERON:0000178,2.27e-24,15;UBERON:0000179,2.27e-24,15;UBERON:0000463,2.27e-24,15;UBERON:0000478,1.38e-15,24;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37527504423104,0,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74421608633348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0.225595660617181,0.19606253431774,0.671286347903371,0.569261198172555,0.635746315921515,0,0,0,0,0,0,0,6.22694370229306,3.21266241260907,2.71497068714184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:51105300..51105305,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C266 | |||
|description=CAGE_peak_at_chr19:51105300..51105305,+ | |||
|id=chr19:51105300..51105305,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.06e-36!5;CL:0000457!8.06e-36!5;CL:0002191!8.06e-36!5;CL:0000097!8.06e-36!5;CL:0000831!8.06e-36!5;CL:0002028!8.06e-36!5;CL:0000163!4.53e-20!9;CL:0000080!1.21e-17!6;CL:0000763!1.86e-12!112;CL:0000049!1.86e-12!112;CL:0000988!1.22e-11!182;CL:0002032!6.35e-08!165;CL:0000837!6.35e-08!165;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.74e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.74e-09,5;CL:0002028,2.74e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.68e-66!8;DOID:8692!5.62e-22!31;DOID:1240!2.66e-17!39;DOID:2531!4.97e-13!51;DOID:0060083!4.97e-13!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002331!8.09e-11!10;UBERON:0000358!8.09e-11!10;UBERON:0000307!8.09e-11!10;UBERON:0000091!8.09e-11!10;UBERON:0000087!8.09e-11!10;UBERON:0007806!8.09e-11!10;UBERON:0008780!8.09e-11!10;UBERON:0005728!8.09e-11!10;UBERON:0000178!2.23e-07!15;UBERON:0000179!2.23e-07!15;UBERON:0000463!2.23e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.93e-36;10!UBERON:0000178;2.27e-24;15!UBERON:0000179;2.27e-24;15!UBERON:0000463;2.27e-24;15!UBERON:0000478;1.38e-15;24!UBERON:0002390;5.23e-12;32!UBERON:0000922;6.81e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.93e-36,10;UBERON:0000358,4.93e-36,10;UBERON:0000307,4.93e-36,10;UBERON:0000091,4.93e-36,10;UBERON:0000087,4.93e-36,10;UBERON:0007010,4.93e-36,10;UBERON:0007806,4.93e-36,10;UBERON:0008780,4.93e-36,10;UBERON:0005728,4.93e-36,10;UBERON:0000178,2.27e-24,15;UBERON:0000179,2.27e-24,15;UBERON:0000463,2.27e-24,15;UBERON:0000478,1.38e-15,24;UBERON:0002390,4.84e-07,98;UBERON:0003061,4.84e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.37527504423104,0,0.621984346622316,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.74421608633348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0.225595660617181,0.19606253431774,0.671286347903371,0.569261198172555,0.635746315921515,0,0,0,0,0,0,0,6.22694370229306,3.21266241260907,2.71497068714184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:51105300..51105305,+ | |||
}} |
Revision as of 21:58, 11 September 2013
Short description: | p@chr19:51105300..51105305, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:51105300..51105305, + |
Coexpression cluster: | C266_acute_chronic_leukemia_small_choriocarcinoma_hepatoma_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.74e-09 | 5 |
basophil mast progenitor cell | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.93e-36 | 10 |
blastocyst | 4.93e-36 | 10 |
blastula | 4.93e-36 | 10 |
bilaminar disc | 4.93e-36 | 10 |
inner cell mass | 4.93e-36 | 10 |
cleaving embryo | 4.93e-36 | 10 |
connecting stalk | 4.93e-36 | 10 |
inner cell mass derived epiblast | 4.93e-36 | 10 |
extraembryonic mesoderm | 4.93e-36 | 10 |
blood | 2.27e-24 | 15 |
haemolymphatic fluid | 2.27e-24 | 15 |
organism substance | 2.27e-24 | 15 |
extraembryonic structure | 1.38e-15 | 24 |
hematopoietic system | 4.84e-07 | 98 |
blood island | 4.84e-07 | 98 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.