FFCP PHASE1:Hg19::chr21:45232423..45232443,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=284837|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=4bp_to_ENST00000400385,NR_026961,uc002zdu.1_5end|coexpression_cluster_id=C92|description=CAGE_peak_2_at_LOC284837_5end|id=chr21:45232423..45232443,-|ontology_enrichment_celltype=CL:0002009!3.76e-18!65;CL:0002194!6.50e-18!63;CL:0000576!6.50e-18!63;CL:0000040!6.50e-18!63;CL:0000559!6.50e-18!63;CL:0000763!4.05e-17!112;CL:0000049!4.05e-17!112;CL:0002057!4.10e-17!42;CL:0000766!2.86e-16!76;CL:0000557!1.18e-15!71;CL:0000860!2.21e-15!45;CL:0000839!5.14e-15!70;CL:0002393!2.69e-14!9;CL:0002397!2.69e-14!9;CL:0000037!3.89e-10!172;CL:0000566!3.89e-10!172;CL:0000738!2.35e-09!140;CL:0002032!3.11e-09!165;CL:0000837!3.11e-09!165;CL:0002087!7.86e-09!119;CL:0000988!9.10e-09!182|ontology_enrichment_celltype_v019=CL:0002393;1.72e-32;6!CL:0002397;1.72e-32;6!CL:0000875;1.70e-17;3!CL:0002396;1.70e-17;3!CL:0000576;1.85e-17;48!CL:0000766;3.89e-12;69!CL:0000226;7.71e-08;3!CL:0002619;7.71e-08;3!CL:0000842;7.71e-08;3|ontology_enrichment_celltype_v019_2=CL:0002393,2.73e-48,9;CL:0002397,2.73e-48,9;CL:0000860,9.71e-23,42;CL:0002057,9.71e-23,42;CL:0002194,1.90e-22,59;CL:0000576,1.90e-22,59;CL:0000040,1.90e-22,59;CL:0000559,1.90e-22,59;CL:0000473,1.98e-22,48;CL:0000234,1.98e-22,48;CL:0002009,1.34e-21,61;CL:0000766,4.75e-20,72;CL:0000839,1.05e-19,66;CL:0000557,2.33e-19,67;CL:0000763,4.85e-19,108;CL:0000049,4.85e-19,108;CL:0000875,1.41e-17,3;CL:0002396,1.41e-17,3;CL:0000037,1.79e-14,168;CL:0002087,2.98e-14,115;CL:0000738,3.33e-14,136;CL:0000988,1.82e-13,177;CL:0002032,1.49e-12,161;CL:0000837,1.49e-12,161;CL:0002031,1.34e-10,120;CL:0000226,6.26e-08,3;CL:0000842,6.26e-08,3;CL:0002619,7.20e-08,3|ontology_enrichment_development_v019=CL:0002057;1.30e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!2.01e-17!102;UBERON:0003061!2.01e-17!102;UBERON:0002193!3.30e-17!112;UBERON:0002371!1.17e-12!80;UBERON:0001474!4.88e-11!86;UBERON:0004765!3.21e-09!101;UBERON:0001434!3.21e-09!101;UBERON:0000178!1.94e-08!15;UBERON:0000179!1.94e-08!15;UBERON:0000463!1.94e-08!15;UBERON:0002405!5.47e-08!115|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-16;15!UBERON:0000179;2.41e-16;15!UBERON:0000463;2.41e-16;15!UBERON:0002390;3.96e-07;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-26,98;UBERON:0003061,3.74e-26,98;UBERON:0002193,2.87e-23,108;UBERON:0002371,1.18e-16,76;UBERON:0000178,1.82e-16,15;UBERON:0000179,1.82e-16,15;UBERON:0000463,1.82e-16,15;UBERON:0001474,3.52e-15,82;UBERON:0004765,1.62e-13,90;UBERON:0002405,5.75e-13,93;UBERON:0001434,8.22e-12,100;UBERON:0003081,5.39e-10,203|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,1.23852898652861,0,0.30120591877825,0.369754010166788,0,0,0,2.21598163412751,1.40381113229099,2.38711957787437,1.34349284543955,1.29557466407592,0.257575567634187,0.726991193897824,0,1.69808842831471,0,0,0,0.575384784644301,0.768482119587302,0.47296445977717,0.344745680736619,0,0,0.564727018627814,0,0.224723484445085,0,0,0,0.329851300186716,0,1.27867425159808,0,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0.316462387440884,2.74631872205524,4.03948169933583,2.72556239160889,4.26848798356681,3.75442232103766,4.8217676009124,3.42015292489498,2.98375015798635,3.28795476776341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,1.11235332835329,0,0,0.26591592103773,0,0,0,0,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0.966304265816484,0.545492241181669,1.14721838155602,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878002283269004,0,0,0.0925884451585296,0,0,0,0,0,0.433099343283221,0,0.190254152234598,0,0,1.23108503043699,0,0.445893486866185,0,0.671928512795438,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6541442089831,1.2942852049117,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40607764363942,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.14851441245126,0.708104465988849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384888450902048,0,0,0,0.86101074534246,0,1.33029046061003,0.459446800413919,0,0,2.84823593587081,0.476463550915578,0.411362273086194,1.94541993357815,1.08006287447623,1.58625035258854,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=284837 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=4bp_to_ENST00000400385,NR_026961,uc002zdu.1_5end | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_2_at_LOC284837_5end | |||
|id=chr21:45232423..45232443,- | |||
|ontology_enrichment_celltype=CL:0002009!3.76e-18!65;CL:0002194!6.50e-18!63;CL:0000576!6.50e-18!63;CL:0000040!6.50e-18!63;CL:0000559!6.50e-18!63;CL:0000763!4.05e-17!112;CL:0000049!4.05e-17!112;CL:0002057!4.10e-17!42;CL:0000766!2.86e-16!76;CL:0000557!1.18e-15!71;CL:0000860!2.21e-15!45;CL:0000839!5.14e-15!70;CL:0002393!2.69e-14!9;CL:0002397!2.69e-14!9;CL:0000037!3.89e-10!172;CL:0000566!3.89e-10!172;CL:0000738!2.35e-09!140;CL:0002032!3.11e-09!165;CL:0000837!3.11e-09!165;CL:0002087!7.86e-09!119;CL:0000988!9.10e-09!182 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.72e-32;6!CL:0002397;1.72e-32;6!CL:0000875;1.70e-17;3!CL:0002396;1.70e-17;3!CL:0000576;1.85e-17;48!CL:0000766;3.89e-12;69!CL:0000226;7.71e-08;3!CL:0002619;7.71e-08;3!CL:0000842;7.71e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.73e-48,9;CL:0002397,2.73e-48,9;CL:0000860,9.71e-23,42;CL:0002057,9.71e-23,42;CL:0002194,1.90e-22,59;CL:0000576,1.90e-22,59;CL:0000040,1.90e-22,59;CL:0000559,1.90e-22,59;CL:0000473,1.98e-22,48;CL:0000234,1.98e-22,48;CL:0002009,1.34e-21,61;CL:0000766,4.75e-20,72;CL:0000839,1.05e-19,66;CL:0000557,2.33e-19,67;CL:0000763,4.85e-19,108;CL:0000049,4.85e-19,108;CL:0000875,1.41e-17,3;CL:0002396,1.41e-17,3;CL:0000037,1.79e-14,168;CL:0002087,2.98e-14,115;CL:0000738,3.33e-14,136;CL:0000988,1.82e-13,177;CL:0002032,1.49e-12,161;CL:0000837,1.49e-12,161;CL:0002031,1.34e-10,120;CL:0000226,6.26e-08,3;CL:0000842,6.26e-08,3;CL:0002619,7.20e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.01e-17!102;UBERON:0003061!2.01e-17!102;UBERON:0002193!3.30e-17!112;UBERON:0002371!1.17e-12!80;UBERON:0001474!4.88e-11!86;UBERON:0004765!3.21e-09!101;UBERON:0001434!3.21e-09!101;UBERON:0000178!1.94e-08!15;UBERON:0000179!1.94e-08!15;UBERON:0000463!1.94e-08!15;UBERON:0002405!5.47e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.41e-16;15!UBERON:0000179;2.41e-16;15!UBERON:0000463;2.41e-16;15!UBERON:0002390;3.96e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.74e-26,98;UBERON:0003061,3.74e-26,98;UBERON:0002193,2.87e-23,108;UBERON:0002371,1.18e-16,76;UBERON:0000178,1.82e-16,15;UBERON:0000179,1.82e-16,15;UBERON:0000463,1.82e-16,15;UBERON:0001474,3.52e-15,82;UBERON:0004765,1.62e-13,90;UBERON:0002405,5.75e-13,93;UBERON:0001434,8.22e-12,100;UBERON:0003081,5.39e-10,203 | |||
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|short_description=p2@LOC284837 | |||
}} |
Revision as of 10:37, 12 September 2013
Short description: | p2@LOC284837 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_LOC284837_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 4bp_to_ENST00000400385, NR_026961, uc002zdu.1_5end |
EntrezGene: | LOC284837 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.73e-48 | 9 |
CD14-positive, CD16-positive monocyte | 2.73e-48 | 9 |
classical monocyte | 9.71e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.71e-23 | 42 |
monopoietic cell | 1.90e-22 | 59 |
monocyte | 1.90e-22 | 59 |
monoblast | 1.90e-22 | 59 |
promonocyte | 1.90e-22 | 59 |
defensive cell | 1.98e-22 | 48 |
phagocyte | 1.98e-22 | 48 |
macrophage dendritic cell progenitor | 1.34e-21 | 61 |
myeloid leukocyte | 4.75e-20 | 72 |
myeloid lineage restricted progenitor cell | 1.05e-19 | 66 |
granulocyte monocyte progenitor cell | 2.33e-19 | 67 |
myeloid cell | 4.85e-19 | 108 |
common myeloid progenitor | 4.85e-19 | 108 |
non-classical monocyte | 1.41e-17 | 3 |
CD14-low, CD16-positive monocyte | 1.41e-17 | 3 |
hematopoietic stem cell | 1.79e-14 | 168 |
nongranular leukocyte | 2.98e-14 | 115 |
leukocyte | 3.33e-14 | 136 |
hematopoietic cell | 1.82e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.49e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.49e-12 | 161 |
hematopoietic lineage restricted progenitor cell | 1.34e-10 | 120 |
single nucleate cell | 6.26e-08 | 3 |
mononuclear cell | 6.26e-08 | 3 |
adult endothelial progenitor cell | 7.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.74e-26 | 98 |
blood island | 3.74e-26 | 98 |
hemolymphoid system | 2.87e-23 | 108 |
bone marrow | 1.18e-16 | 76 |
blood | 1.82e-16 | 15 |
haemolymphatic fluid | 1.82e-16 | 15 |
organism substance | 1.82e-16 | 15 |
bone element | 3.52e-15 | 82 |
skeletal element | 1.62e-13 | 90 |
immune system | 5.75e-13 | 93 |
skeletal system | 8.22e-12 | 100 |
lateral plate mesoderm | 5.39e-10 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.