FFCP PHASE1:Hg19::chr4:1857817..1857912,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3954 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6556 | |||
|TSSclassifier=S | |||
|UniProt=O95202 | |||
|association_with_transcript=61bp_to_ENST00000302787,NM_012318,uc003gdv.2,uc011bvg.1_5end | |||
|description=CAGE_peak_1_at_LETM1_5end | |||
|id=chr4:1857817..1857912,- | |||
|ontology_enrichment_celltype=CL:0000220!4.14e-21!246;CL:0002321!6.51e-21!248;CL:0000066!2.00e-16!254;CL:0000222!1.10e-10!119;CL:1000449!4.07e-08!16;CL:0000223!6.37e-08!59;CL:0000183!2.21e-07!59;CL:0002368!3.46e-07!13;CL:0000055!5.00e-07!180;CL:0002681!6.13e-07!13;CL:0002584!6.13e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;1.75e-08;15!CL:0002681;2.49e-07;12!CL:0002584;2.49e-07;12!CL:0002368;3.26e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.74e-21,250;CL:0000066,1.85e-16,253;CL:0000222,5.50e-11,121;CL:1000449,1.54e-08,15;CL:0000223,4.58e-08,58;CL:0002681,2.25e-07,12;CL:0002584,2.25e-07,12;CL:0002368,3.46e-07,13;CL:0002076,8.52e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@LETM1 | |||
}} |
Revision as of 10:17, 13 September 2013
Short description: | p1@LETM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LETM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 61bp_to_ENST00000302787, NM_012318, uc003gdv.2, uc011bvg.1_5end |
EntrezGene: | LETM1 |
HGNC: | 6556 |
UniProt: | O95202 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.74e-21 | 250 |
epithelial cell | 1.85e-16 | 253 |
mesodermal cell | 5.50e-11 | 121 |
epithelial cell of nephron | 1.54e-08 | 15 |
endodermal cell | 4.58e-08 | 58 |
kidney cortical cell | 2.25e-07 | 12 |
renal cortical epithelial cell | 2.25e-07 | 12 |
respiratory epithelial cell | 3.46e-07 | 13 |
endo-epithelial cell | 8.52e-07 | 42 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.