FFCP PHASE1:Hg19::chr4:26323870..26323885,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3516|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5724|TSSclassifier=S|UniProt=D6RBQ8|association_with_transcript=39bp_to_ENST00000507574_5end|description=CAGE_peak_13_at_RBPJ_5end|id=chr4:26323870..26323885,+|ontology_enrichment_celltype=CL:0000055!3.25e-11!180;CL:0000188!4.41e-08!9;CL:0000840!4.75e-07!5;CL:0001029!4.75e-07!5;CL:0000515!9.46e-07!4|ontology_enrichment_celltype_v019=CL:0000840;8.60e-23;5!CL:0000990;3.99e-15;8!CL:0000056;1.53e-12;4!CL:0000451;2.49e-12;10!CL:0001014;7.63e-12;2!CL:0001016;7.63e-12;2!CL:0000214;2.52e-08;3!CL:0000135;2.91e-08;3!CL:0000388;2.91e-08;3!CL:0002573;3.55e-08;2!CL:0000515;5.44e-08;3!CL:0002582;6.71e-08;3!CL:0000680;2.32e-07;7|ontology_enrichment_celltype_v019_2=CL:0000840,9.43e-23,5;CL:0001029,9.43e-23,5;CL:0000990,4.23e-15,8;CL:0000515,1.07e-12,4;CL:0000451,2.61e-12,10;CL:0001014,8.51e-12,2;CL:0001016,8.51e-12,2;CL:0000214,2.48e-08,3;CL:0000135,2.57e-08,3;CL:0000388,2.57e-08,3;CL:0002573,3.19e-08,2;CL:0002582,6.49e-08,3;CL:0000228,8.97e-07,1;CL:0002372,8.97e-07,1|ontology_enrichment_development_v019=CL:0000515;1.53e-12;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;1.02e-07;3!DOID:127;1.02e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,6.49e-08,3;DOID:127,6.49e-08,3|ontology_enrichment_uberon=UBERON:0000914!1.77e-08!83;UBERON:0002329!1.77e-08!83;UBERON:0003077!1.77e-08!83;UBERON:0003059!1.77e-08!83;UBERON:0007282!1.77e-08!83;UBERON:0009618!1.77e-08!83;UBERON:0007285!1.77e-08!83;UBERON:0000486!5.84e-08!82;UBERON:0004290!2.27e-07!70;UBERON:0004905!3.37e-07!5;UBERON:0000982!3.37e-07!5;UBERON:0004770!3.37e-07!5|ontology_enrichment_uberon_v019=UBERON:0006915;2.52e-08;3!UBERON:0007616;2.52e-08;3!UBERON:0002217;2.52e-08;3!UBERON:0002018;2.52e-08;3!UBERON:0007846;2.91e-08;3!UBERON:0000043;2.91e-08;3!UBERON:0007845;2.91e-08;3!UBERON:0001134;4.82e-08;16!UBERON:0002036;4.82e-08;16|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.48e-08,3;UBERON:0007616,2.48e-08,3;UBERON:0002217,2.48e-08,3;UBERON:0002018,2.48e-08,3;UBERON:0002204,2.51e-08,167;UBERON:0007846,2.57e-08,3;UBERON:0000043,2.57e-08,3;UBERON:0007845,2.57e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426224750532694,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.334231370655521,0,0,0.270803863765016,0.384273959177026,0.650296737799391,0,0,0,0,0,0,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,1.44575660953827,0.50133791063589,0.434539556882471,0,0,0,0,0,0,0,0,4.21911611751088,4.00498395788315,4.25465473660369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0.936480230490962,0,0.298897361103602,0.469737994575059,0.161872944368132,0.140450806702248,0.204154171254893,1.35117749042945,0,0,0,0,0,1.17835279767846,1.00094815897571,0,0,0,0,0,0,0,0.423863802319124,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0,0.484938170456436,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0.977424915930974,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,3.4747513600219,0.410952645100767,1.61154866915906,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0,0,0.117141414992713,0.601892199455438,0,0,0,0.553107505625109,0.260650843404249,0,0.343143423810856,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,1.06537035187876,2.21743321237285,0,1.51073491997947,0,0,0,0.459257792658427,0.728364672026868,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330037999682352,0,0,0,2.22342652071881,0.308097234229289,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,0.890320356467374,0,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0.744316738719335,0.316379424718726,0,0,1.28381696410176,0.95460974377781,0,1.07923474549989,0,0,0.606547444719948,0,0,0,0,0,0.545999645631943,0.424216295861138,0,0,0,0,0,0.655894752046633,0,0.30982349809975,0,0,0,0,0.354761064070598,11.6109199413715,2.63435914367922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.37086090779565,0,0,0,0,0,0,0,0,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,13.0469296619474,6.67245270311115,11.695258344611,0,0,0.234264445725339,0,0,0,0,0,0,0.758238955541855,0.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3516 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5724 | |||
|TSSclassifier=S | |||
|UniProt=D6RBQ8 | |||
|association_with_transcript=39bp_to_ENST00000507574_5end | |||
|description=CAGE_peak_13_at_RBPJ_5end | |||
|id=chr4:26323870..26323885,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.25e-11!180;CL:0000188!4.41e-08!9;CL:0000840!4.75e-07!5;CL:0001029!4.75e-07!5;CL:0000515!9.46e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000840;8.60e-23;5!CL:0000990;3.99e-15;8!CL:0000056;1.53e-12;4!CL:0000451;2.49e-12;10!CL:0001014;7.63e-12;2!CL:0001016;7.63e-12;2!CL:0000214;2.52e-08;3!CL:0000135;2.91e-08;3!CL:0000388;2.91e-08;3!CL:0002573;3.55e-08;2!CL:0000515;5.44e-08;3!CL:0002582;6.71e-08;3!CL:0000680;2.32e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,9.43e-23,5;CL:0001029,9.43e-23,5;CL:0000990,4.23e-15,8;CL:0000515,1.07e-12,4;CL:0000451,2.61e-12,10;CL:0001014,8.51e-12,2;CL:0001016,8.51e-12,2;CL:0000214,2.48e-08,3;CL:0000135,2.57e-08,3;CL:0000388,2.57e-08,3;CL:0002573,3.19e-08,2;CL:0002582,6.49e-08,3;CL:0000228,8.97e-07,1;CL:0002372,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000515;1.53e-12;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;1.02e-07;3!DOID:127;1.02e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.49e-08,3;DOID:127,6.49e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.77e-08!83;UBERON:0002329!1.77e-08!83;UBERON:0003077!1.77e-08!83;UBERON:0003059!1.77e-08!83;UBERON:0007282!1.77e-08!83;UBERON:0009618!1.77e-08!83;UBERON:0007285!1.77e-08!83;UBERON:0000486!5.84e-08!82;UBERON:0004290!2.27e-07!70;UBERON:0004905!3.37e-07!5;UBERON:0000982!3.37e-07!5;UBERON:0004770!3.37e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;2.52e-08;3!UBERON:0007616;2.52e-08;3!UBERON:0002217;2.52e-08;3!UBERON:0002018;2.52e-08;3!UBERON:0007846;2.91e-08;3!UBERON:0000043;2.91e-08;3!UBERON:0007845;2.91e-08;3!UBERON:0001134;4.82e-08;16!UBERON:0002036;4.82e-08;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,2.48e-08,3;UBERON:0007616,2.48e-08,3;UBERON:0002217,2.48e-08,3;UBERON:0002018,2.48e-08,3;UBERON:0002204,2.51e-08,167;UBERON:0007846,2.57e-08,3;UBERON:0000043,2.57e-08,3;UBERON:0007845,2.57e-08,3 | |||
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|short_description=p13@RBPJ | |||
}} |
Revision as of 10:37, 13 September 2013
Short description: | p13@RBPJ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_RBPJ_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000507574_5end |
EntrezGene: | RBPJ |
HGNC: | 5724 |
UniProt: | D6RBQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 9.43e-23 | 5 |
common dendritic progenitor | 9.43e-23 | 5 |
conventional dendritic cell | 4.23e-15 | 8 |
skeletal muscle myoblast | 1.07e-12 | 4 |
dendritic cell | 2.61e-12 | 10 |
CD1a-positive Langerhans cell | 8.51e-12 | 2 |
immature CD1a-positive Langerhans cell | 8.51e-12 | 2 |
synovial cell | 2.48e-08 | 3 |
fibrocyte | 2.57e-08 | 3 |
tendon cell | 2.57e-08 | 3 |
Schwann cell | 3.19e-08 | 2 |
visceral preadipocyte | 6.49e-08 | 3 |
multinucleate cell | 8.97e-07 | 1 |
myotube | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 2.48e-08 | 3 |
layer of synovial tissue | 2.48e-08 | 3 |
synovial joint | 2.48e-08 | 3 |
synovial membrane of synovial joint | 2.48e-08 | 3 |
musculoskeletal system | 2.51e-08 | 167 |
dense regular connective tissue | 2.57e-08 | 3 |
tendon | 2.57e-08 | 3 |
regular connective tissue | 2.57e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.49e-08 | 3 |
leiomyoma | 6.49e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.