FFCP PHASE1:Hg19::chr6:30131199..30131210,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2294|description=CAGE_peak_at_chr6:30131199..30131210,-|id=chr6:30131199..30131210,-|ontology_enrichment_celltype=CL:0000181!5.39e-24!12;CL:0000417!5.39e-24!12;CL:0000668!5.39e-24!12;CL:0000414!5.39e-24!12;CL:0000412!5.39e-24!12;CL:0000182!5.39e-24!12;CL:0000223!1.09e-20!59;CL:0002178!7.64e-14!3;CL:0000764!1.36e-09!2;CL:0000765!1.36e-09!2;CL:0000050!1.36e-09!2;CL:0000038!1.36e-09!2;CL:0000558!1.36e-09!2;CL:0000547!1.36e-09!2;CL:0000549!1.36e-09!2;CL:0000550!1.36e-09!2;CL:0000552!1.36e-09!2|ontology_enrichment_celltype_v019=CL:0000182;7.10e-30;12|ontology_enrichment_celltype_v019_2=CL:0000182,6.71e-30,12;CL:0000223,1.41e-11,58|ontology_enrichment_development_v019=UBERON:0004161;1.42e-32;11!UBERON:0009497;1.37e-27;13!UBERON:0003104;1.95e-16;31!UBERON:0001041;5.45e-12;30!CL:0000223;2.94e-08;58!UBERON:0006595;1.69e-07;86|ontology_enrichment_disease=DOID:299!1.13e-15!25;DOID:305!1.00e-10!106;DOID:3119!1.01e-10!14;DOID:3493!7.62e-10!2;DOID:4929!2.63e-09!2;DOID:0050687!6.77e-07!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.08e-28!35;UBERON:0009854!2.16e-26!23;UBERON:0000160!1.29e-24!27;UBERON:0009497!5.33e-24!25;UBERON:0000015!5.33e-24!25;UBERON:0002423!5.33e-24!25;UBERON:0006235!5.33e-24!25;UBERON:0004161!5.33e-24!25;UBERON:0008835!2.48e-23!22;UBERON:0003894!2.48e-23!22;UBERON:0009856!4.77e-23!26;UBERON:0002107!8.18e-23!19;UBERON:0006925!8.18e-23!19;UBERON:0008836!8.18e-23!19;UBERON:0007499!2.95e-20!25;UBERON:0004921!2.22e-19!129;UBERON:0004185!2.22e-19!129;UBERON:0001007!1.84e-16!155;UBERON:0001555!1.84e-16!155;UBERON:0007026!1.84e-16!155;UBERON:0005057!3.89e-16!26;UBERON:0003929!8.96e-16!54;UBERON:0005172!2.12e-15!55;UBERON:0005173!2.12e-15!55;UBERON:0004119!1.41e-14!169;UBERON:0000925!1.41e-14!169;UBERON:0006595!1.41e-14!169;UBERON:0000059!1.49e-14!11;UBERON:0002417!1.49e-13!61;UBERON:0000916!1.49e-13!61;UBERON:0002365!3.24e-13!31;UBERON:0002330!3.24e-13!31;UBERON:0001155!9.17e-13!9;UBERON:0000949!3.47e-12!45;UBERON:0002368!1.76e-11!35;UBERON:0000077!2.47e-10!130;UBERON:0002108!3.54e-10!14;UBERON:0005911!2.98e-09!82;UBERON:0004907!1.70e-08!5;UBERON:0005177!2.19e-08!107;UBERON:0001041!3.29e-08!98;UBERON:0002530!2.18e-07!59|ontology_enrichment_uberon_v019=UBERON:0005409;1.72e-29;22!UBERON:0000160;6.68e-28;17!UBERON:0002107;7.75e-27;19!UBERON:0006925;7.75e-27;19!UBERON:0002423;2.31e-20;25!UBERON:0004921;7.18e-17;33!UBERON:0002365;1.88e-15;31!UBERON:0002330;1.88e-15;31!UBERON:0002368;6.26e-15;33!UBERON:0001155;9.52e-15;9!UBERON:0002108;2.82e-12;4!UBERON:0000059;3.51e-12;11!UBERON:0001007;1.04e-11;81!UBERON:0000949;6.37e-10;43!UBERON:0005172;1.09e-08;52!UBERON:0005173;1.09e-08;52!UBERON:0002417;3.11e-08;58!UBERON:0000916;3.11e-08;58!UBERON:0001555;9.26e-07;54|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.37e-28,17;UBERON:0002107,7.77e-27,19;UBERON:0006925,7.77e-27,19;UBERON:0008836,7.77e-27,19;UBERON:0005409,4.08e-26,25;UBERON:0008835,3.69e-23,22;UBERON:0003894,3.69e-23,22;UBERON:0009854,3.81e-22,23;UBERON:0007499,2.32e-20,25;UBERON:0009497,2.32e-20,25;UBERON:0000015,2.32e-20,25;UBERON:0002423,2.32e-20,25;UBERON:0006235,2.32e-20,25;UBERON:0004161,2.32e-20,25;UBERON:0009856,1.43e-19,26;UBERON:0004921,6.48e-19,118;UBERON:0002365,2.20e-16,31;UBERON:0002330,2.20e-16,31;UBERON:0001007,3.50e-15,145;UBERON:0001555,3.50e-15,145;UBERON:0007026,3.50e-15,145;UBERON:0001155,8.67e-15,9;UBERON:0002368,1.74e-14,35;UBERON:0004119,1.21e-13,160;UBERON:0000925,1.21e-13,160;UBERON:0006595,1.21e-13,160;UBERON:0003929,1.68e-12,54;UBERON:0005172,1.87e-12,54;UBERON:0005173,1.87e-12,54;UBERON:0002108,2.12e-12,4;UBERON:0000059,3.26e-12,11;UBERON:0000949,3.28e-11,45;UBERON:0002417,3.69e-11,60;UBERON:0000916,3.69e-11,60;UBERON:0011216,2.83e-09,223;UBERON:0002530,1.77e-08,59;UBERON:0005911,4.74e-08,82;UBERON:0001041,1.60e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.515205058238611,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2294 | |||
|description=CAGE_peak_at_chr6:30131199..30131210,- | |||
|id=chr6:30131199..30131210,- | |||
|ontology_enrichment_celltype=CL:0000181!5.39e-24!12;CL:0000417!5.39e-24!12;CL:0000668!5.39e-24!12;CL:0000414!5.39e-24!12;CL:0000412!5.39e-24!12;CL:0000182!5.39e-24!12;CL:0000223!1.09e-20!59;CL:0002178!7.64e-14!3;CL:0000764!1.36e-09!2;CL:0000765!1.36e-09!2;CL:0000050!1.36e-09!2;CL:0000038!1.36e-09!2;CL:0000558!1.36e-09!2;CL:0000547!1.36e-09!2;CL:0000549!1.36e-09!2;CL:0000550!1.36e-09!2;CL:0000552!1.36e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000182;7.10e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,6.71e-30,12;CL:0000223,1.41e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.42e-32;11!UBERON:0009497;1.37e-27;13!UBERON:0003104;1.95e-16;31!UBERON:0001041;5.45e-12;30!CL:0000223;2.94e-08;58!UBERON:0006595;1.69e-07;86 | |||
|ontology_enrichment_disease=DOID:299!1.13e-15!25;DOID:305!1.00e-10!106;DOID:3119!1.01e-10!14;DOID:3493!7.62e-10!2;DOID:4929!2.63e-09!2;DOID:0050687!6.77e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.08e-28!35;UBERON:0009854!2.16e-26!23;UBERON:0000160!1.29e-24!27;UBERON:0009497!5.33e-24!25;UBERON:0000015!5.33e-24!25;UBERON:0002423!5.33e-24!25;UBERON:0006235!5.33e-24!25;UBERON:0004161!5.33e-24!25;UBERON:0008835!2.48e-23!22;UBERON:0003894!2.48e-23!22;UBERON:0009856!4.77e-23!26;UBERON:0002107!8.18e-23!19;UBERON:0006925!8.18e-23!19;UBERON:0008836!8.18e-23!19;UBERON:0007499!2.95e-20!25;UBERON:0004921!2.22e-19!129;UBERON:0004185!2.22e-19!129;UBERON:0001007!1.84e-16!155;UBERON:0001555!1.84e-16!155;UBERON:0007026!1.84e-16!155;UBERON:0005057!3.89e-16!26;UBERON:0003929!8.96e-16!54;UBERON:0005172!2.12e-15!55;UBERON:0005173!2.12e-15!55;UBERON:0004119!1.41e-14!169;UBERON:0000925!1.41e-14!169;UBERON:0006595!1.41e-14!169;UBERON:0000059!1.49e-14!11;UBERON:0002417!1.49e-13!61;UBERON:0000916!1.49e-13!61;UBERON:0002365!3.24e-13!31;UBERON:0002330!3.24e-13!31;UBERON:0001155!9.17e-13!9;UBERON:0000949!3.47e-12!45;UBERON:0002368!1.76e-11!35;UBERON:0000077!2.47e-10!130;UBERON:0002108!3.54e-10!14;UBERON:0005911!2.98e-09!82;UBERON:0004907!1.70e-08!5;UBERON:0005177!2.19e-08!107;UBERON:0001041!3.29e-08!98;UBERON:0002530!2.18e-07!59 | |||
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|short_description=p@chr6:30131199..30131210,- | |||
}} |
Revision as of 19:59, 13 September 2013
Short description: | p@chr6:30131199..30131210, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:30131199..30131210, - |
Coexpression cluster: | C2294_hepatocellular_small_hepatoblastoma_Hepatocyte_colon_adenocarcinoma_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 6.71e-30 | 12 |
endodermal cell | 1.41e-11 | 58 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.