FFCP PHASE1:Hg19::chr6:108145556..108145565,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=256380|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=21397|TSSclassifier=S|UniProt=Q8N228|association_with_transcript=-35bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end|coexpression_cluster_id=C18|description=CAGE_peak_6_at_SCML4_5end|id=chr6:108145556..108145565,-|ontology_enrichment_celltype=CL:0000838!5.51e-39!52;CL:0000542!4.62e-38!53;CL:0000051!4.62e-38!53;CL:0000791!9.17e-36!18;CL:0000789!9.17e-36!18;CL:0002420!9.17e-36!18;CL:0002419!9.17e-36!18;CL:0000790!9.17e-36!18;CL:0000084!2.57e-24!25;CL:0000827!2.57e-24!25;CL:0000625!8.01e-21!11;CL:0000738!4.45e-20!140;CL:0002087!4.31e-19!119;CL:0000037!6.56e-16!172;CL:0000566!6.56e-16!172;CL:0000236!1.19e-15!14;CL:0002031!1.67e-15!124;CL:0000624!6.80e-15!6;CL:0000988!2.25e-14!182;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0000945!1.67e-11!24;CL:0000826!1.67e-11!24;CL:0000898!1.87e-08!3;CL:0000623!6.13e-08!3;CL:0000825!6.13e-08!3;CL:0000842!1.72e-07!3|ontology_enrichment_celltype_v019=CL:0000791;2.23e-59;18!CL:0000789;2.23e-59;18!CL:0002419;2.23e-59;18!CL:0000084;7.79e-42;25!CL:0000625;3.34e-35;11!CL:0000624;4.80e-30;6!CL:0000542;1.07e-29;53!CL:0000236;1.41e-18;13!CL:0000898;2.18e-16;3!CL:0000815;2.84e-11;2!CL:0000792;2.84e-11;2!CL:0002677;2.84e-11;2!CL:0000945;1.23e-09;24!CL:0002087;1.50e-07;104!CL:0000623;1.57e-07;3!CL:0000895;8.10e-07;1|ontology_enrichment_celltype_v019_2=CL:0000791,9.48e-60,18;CL:0000789,9.48e-60,18;CL:0002420,9.48e-60,18;CL:0002419,9.48e-60,18;CL:0000790,9.48e-60,18;CL:0000838,1.02e-50,52;CL:0000542,1.17e-49,53;CL:0000051,1.17e-49,53;CL:0000084,4.24e-42,25;CL:0000827,4.24e-42,25;CL:0000625,1.53e-35,11;CL:0000624,4.51e-30,6;CL:0002087,1.26e-21,115;CL:0000738,6.02e-21,136;CL:0002031,1.02e-18,120;CL:0000236,3.87e-17,14;CL:0000898,2.78e-16,3;CL:0000037,7.36e-16,168;CL:0002032,2.23e-15,161;CL:0000837,2.23e-15,161;CL:0000988,9.26e-15,177;CL:0000815,3.33e-11,2;CL:0000792,3.33e-11,2;CL:0002677,3.33e-11,2;CL:0000945,1.31e-09,24;CL:0000826,1.31e-09,24;CL:0000623,1.21e-07,3;CL:0000825,1.21e-07,3;CL:0000810,8.81e-07,1;CL:0000895,8.81e-07,1;CL:0002436,8.81e-07,1;CL:0002427,8.81e-07,1;CL:0002428,8.81e-07,1;CL:0002429,8.81e-07,1;CL:0002433,8.81e-07,1;CL:0002431,8.81e-07,1;CL:0002432,8.81e-07,1|ontology_enrichment_development_v019=CL:0000790;2.23e-59;18!CL:0000051;1.07e-29;53!CL:0002427;8.10e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!4.37e-13!15;UBERON:0000179!4.37e-13!15;UBERON:0000463!4.37e-13!15;UBERON:0004177!5.07e-11!7;UBERON:0002370!9.36e-10!4;UBERON:0005058!9.36e-10!4;UBERON:0009113!9.36e-10!4;UBERON:0003295!9.36e-10!4;UBERON:0005562!9.36e-10!4|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.0787107813136792,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,0.889509253863555,2.13365111283254,2.00197993518006,2.29900975981793,0.661044872784862,1.90810750907073,1.1384259382189,0,0.764546456250458,0,0.560508562981536,0,1.180258620683,1.96505381374582,1.64481199199607,1.17030546773475,2.28145586643513,2.36723902867367,3.89653456815823,0.111410456885174,1.47302953737419,0.664601683750863,0.812411591295047,0,0.260118695119756,1.64437904603676,1.65810010671509,1.15921234294021,3.55887751588945,2.94294910898684,2.09071047609954,0.226618685395132,3.06576394881537,1.71813722741315,1.51811815211702,1.91139248594458,1.95325036156926,1.90090408889675,1.95747654801105,3.32765189001488,1.24930726552346,1.4206635122641,0,0.80642697289893,1.06976078313403,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,1.97030760201927,0.862510299438069,1.41177339907723,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=256380 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21397 | |||
|TSSclassifier=S | |||
|UniProt=Q8N228 | |||
|association_with_transcript=-35bp_to_ENST00000369022,NM_198081,uc003prz.3,uc010kdf.2,uc011eam.1_5end | |||
|coexpression_cluster_id=C18 | |||
|description=CAGE_peak_6_at_SCML4_5end | |||
|id=chr6:108145556..108145565,- | |||
|ontology_enrichment_celltype=CL:0000838!5.51e-39!52;CL:0000542!4.62e-38!53;CL:0000051!4.62e-38!53;CL:0000791!9.17e-36!18;CL:0000789!9.17e-36!18;CL:0002420!9.17e-36!18;CL:0002419!9.17e-36!18;CL:0000790!9.17e-36!18;CL:0000084!2.57e-24!25;CL:0000827!2.57e-24!25;CL:0000625!8.01e-21!11;CL:0000738!4.45e-20!140;CL:0002087!4.31e-19!119;CL:0000037!6.56e-16!172;CL:0000566!6.56e-16!172;CL:0000236!1.19e-15!14;CL:0002031!1.67e-15!124;CL:0000624!6.80e-15!6;CL:0000988!2.25e-14!182;CL:0002032!3.76e-14!165;CL:0000837!3.76e-14!165;CL:0000945!1.67e-11!24;CL:0000826!1.67e-11!24;CL:0000898!1.87e-08!3;CL:0000623!6.13e-08!3;CL:0000825!6.13e-08!3;CL:0000842!1.72e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.23e-59;18!CL:0000789;2.23e-59;18!CL:0002419;2.23e-59;18!CL:0000084;7.79e-42;25!CL:0000625;3.34e-35;11!CL:0000624;4.80e-30;6!CL:0000542;1.07e-29;53!CL:0000236;1.41e-18;13!CL:0000898;2.18e-16;3!CL:0000815;2.84e-11;2!CL:0000792;2.84e-11;2!CL:0002677;2.84e-11;2!CL:0000945;1.23e-09;24!CL:0002087;1.50e-07;104!CL:0000623;1.57e-07;3!CL:0000895;8.10e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.48e-60,18;CL:0000789,9.48e-60,18;CL:0002420,9.48e-60,18;CL:0002419,9.48e-60,18;CL:0000790,9.48e-60,18;CL:0000838,1.02e-50,52;CL:0000542,1.17e-49,53;CL:0000051,1.17e-49,53;CL:0000084,4.24e-42,25;CL:0000827,4.24e-42,25;CL:0000625,1.53e-35,11;CL:0000624,4.51e-30,6;CL:0002087,1.26e-21,115;CL:0000738,6.02e-21,136;CL:0002031,1.02e-18,120;CL:0000236,3.87e-17,14;CL:0000898,2.78e-16,3;CL:0000037,7.36e-16,168;CL:0002032,2.23e-15,161;CL:0000837,2.23e-15,161;CL:0000988,9.26e-15,177;CL:0000815,3.33e-11,2;CL:0000792,3.33e-11,2;CL:0002677,3.33e-11,2;CL:0000945,1.31e-09,24;CL:0000826,1.31e-09,24;CL:0000623,1.21e-07,3;CL:0000825,1.21e-07,3;CL:0000810,8.81e-07,1;CL:0000895,8.81e-07,1;CL:0002436,8.81e-07,1;CL:0002427,8.81e-07,1;CL:0002428,8.81e-07,1;CL:0002429,8.81e-07,1;CL:0002433,8.81e-07,1;CL:0002431,8.81e-07,1;CL:0002432,8.81e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.23e-59;18!CL:0000051;1.07e-29;53!CL:0002427;8.10e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.37e-13!15;UBERON:0000179!4.37e-13!15;UBERON:0000463!4.37e-13!15;UBERON:0004177!5.07e-11!7;UBERON:0002370!9.36e-10!4;UBERON:0005058!9.36e-10!4;UBERON:0009113!9.36e-10!4;UBERON:0003295!9.36e-10!4;UBERON:0005562!9.36e-10!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.0787107813136792,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,0.889509253863555,2.13365111283254,2.00197993518006,2.29900975981793,0.661044872784862,1.90810750907073,1.1384259382189,0,0.764546456250458,0,0.560508562981536,0,1.180258620683,1.96505381374582,1.64481199199607,1.17030546773475,2.28145586643513,2.36723902867367,3.89653456815823,0.111410456885174,1.47302953737419,0.664601683750863,0.812411591295047,0,0.260118695119756,1.64437904603676,1.65810010671509,1.15921234294021,3.55887751588945,2.94294910898684,2.09071047609954,0.226618685395132,3.06576394881537,1.71813722741315,1.51811815211702,1.91139248594458,1.95325036156926,1.90090408889675,1.95747654801105,3.32765189001488,1.24930726552346,1.4206635122641,0,0.80642697289893,1.06976078313403,1.88271725047639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,1.97030760201927,0.862510299438069,1.41177339907723,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,1.07857100409308,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0.952927101831156,0.822724546172388,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0.320362237703084,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.581300188524055,1.73809200028402,0,0,0,0,0,0.942928742204225,0,0,0,0,0,0,0,0,0,0,0.805095174364105,0 | |||
|short_description=p6@SCML4 | |||
}} |
Revision as of 17:16, 13 September 2013
Short description: | p6@SCML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SCML4_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -35bp_to_ENST00000369022, NM_198081, uc003prz.3, uc010kdf.2, uc011eam.1_5end |
EntrezGene: | SCML4 |
HGNC: | 21397 |
UniProt: | Q8N228 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.